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The map label for this gene is yadS [C]

Identifier: 157960826

GI number: 157960826

Start: 1215721

End: 1216344

Strand: Reverse

Name: yadS [C]

Synonym: Spea_0998

Alternate gene names: 157960826

Gene position: 1216344-1215721 (Counterclockwise)

Preceding gene: 157960827

Following gene: 157960825

Centisome position: 23.51

GC content: 47.6

Gene sequence:

>624_bases
ATGATCGATTGGATCTATTTCTTCGACTTGTGTGGTACCGCGGTATTTGCCCTGTCAGGCGCATTAGCTGCTGGCAGGCA
CAAGATGGACCCTTTTGGGGTACTGGTGCTGGCTTCGGTTACCGCTATTGGCGGCGGCAGTATTCGCGACGCCCTGTTAG
GCACCACGCCAGTTTTTTGGATCCAAGACCACAATTACATCACGGTAATTTTAGTCACAGTGTTTTTAACCTTTATTTTT
GTTCGCAAGCCTAAACGAGTCCCACGCTATATCTTACCTGTTGCCGACGCTCTTGGTTTGGCATTATTTACTGTGATTGG
CGTAGAAAAAGCACTAAATTTAGAACTCAGTGGCATGACTGCCGTAGTGATGGGGTTAATCACAGGCGTTGGTGGTGGTA
TTATTCGTGACTTACTCTGCCAGCAAGTCCCTATGGTACTGCGCACAGAGATCTACGCCACCGCATCAATAATGGGGGGG
ATATGTTACACCATTAGCCTGCATTGGGGAGCGGCCGATATGTTTGCCTTATTATTTGCAATGAGTACCGCACTCGTGAT
TAGATTAGCCGCTATTCGTTGGCACCTGTCGTTACCCGCTTTTGATTTAAAGACACCACAATAA

Upstream 100 bases:

>100_bases
GTTGCAGCCTATTCTTACTACTTTATTCACTGTTACTTTCGGTTATTGAGATCCGTATATCGGTCGATGCCCTCAATATT
CATCTTGAAGAGATGGACAG

Downstream 100 bases:

>100_bases
TGAGATTAGCTTTAATTAGTTTTTTACTTGTACTCTTCAGTTTTCCGGCGTTCGCTAATATCGGCGATATGCCTAAAGAG
CAGCAGCTAGCGATTAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFWIQDHNYITVILVTVFLTFIF
VRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMTAVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGG
ICYTISLHWGAADMFALLFAMSTALVIRLAAIRWHLSLPAFDLKTPQ

Sequences:

>Translated_207_residues
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFWIQDHNYITVILVTVFLTFIF
VRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMTAVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGG
ICYTISLHWGAADMFALLFAMSTALVIRLAAIRWHLSLPAFDLKTPQ
>Mature_207_residues
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFWIQDHNYITVILVTVFLTFIF
VRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMTAVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGG
ICYTISLHWGAADMFALLFAMSTALVIRLAAIRWHLSLPAFDLKTPQ

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=205, Percent_Identity=56.0975609756098, Blast_Score=196, Evalue=9e-52,
Organism=Escherichia coli, GI87082304, Length=160, Percent_Identity=41.25, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22374; Mature: 22374

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
IQDHNYITVILVTVFLTFIFVRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMT
EECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECHHH
AVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGGICYTISLHWGAADMFALLFA
HHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHH
MSTALVIRLAAIRWHLSLPAFDLKTPQ
HHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIDWIYFFDLCGTAVFALSGALAAGRHKMDPFGVLVLASVTAIGGGSIRDALLGTTPVFW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
IQDHNYITVILVTVFLTFIFVRKPKRVPRYILPVADALGLALFTVIGVEKALNLELSGMT
EECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECHHH
AVVMGLITGVGGGIIRDLLCQQVPMVLRTEIYATASIMGGICYTISLHWGAADMFALLFA
HHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHH
MSTALVIRLAAIRWHLSLPAFDLKTPQ
HHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301; 1741267 [H]