| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960809
Identifier: 157960809
GI number: 157960809
Start: 1193886
End: 1195112
Strand: Reverse
Name: 157960809
Synonym: Spea_0981
Alternate gene names: NA
Gene position: 1195112-1193886 (Counterclockwise)
Preceding gene: 157960810
Following gene: 157960808
Centisome position: 23.1
GC content: 48.66
Gene sequence:
>1227_bases ATGGCTATCGATAGACGTAATTTTTTAAAGGGCGCTGCAGCGACCTCAGTAACAGCCATGCTGCCACTTAACTGGGCCTT TGCATCAAACCGCCCAGCTGGTATTGAGCCAATGGACGTATCTGCAGTTAAGTGGAAGAGTGTTGATGACTTACCAAGCC ACTTTAAAGTGCTTAACTCAAGCCCACTGAACGCTTTCCCACCTGAGCACTTGCTTGCACCAGTAAAAACTCCTGCCGAT GTTGCCTTTATCCGCTGGAACGGCAAGATGCCAGAATTCGATAAGATTGATCCAGATACTTGGGAATTTACCGTTGACGG TGAGTCAATCGAAACACCAAAGACCTACACCATCGCCGAGCTTAAAAAGAAGTTCAAGACTCACACTCAGCAACTGGTTC TAGAATGTGGCGGTAACAGCCGCGAAAACTTCTATCCAAATGCTAAGGGTAACCAGTGGAGTAACACTGCGGTATTCTGC GCAGAGTGGACAGGCGTATTGATTAAAGACGTACTTGCCGATTGTGGTGTGAAGAGCGACGCAGTTTATACCGCTCACTA CGGTGCAGATAAGCACATCAGCGGTAAAGGCGCAGCCATCTCTCGCGGTGTACCTATCGACGCAGCCATGAATGAAAACG GCATGATTGCCTGGGGCATGAACGGCGAAGATATTCCATACATGCACGGTTACCCACTACGTATCGTATTCGGCGGCCGT CCAGGTTCAGTTTCACAGAAATGTGCTACAGGTATGGGCGTTCGTGATCGCGTACACGACGGTAAGAAGATGGGCGCACC TGCTTATCAAGTGCCAAAGTATCCAGTAGCCCCTGGTGAGAAAGTCGATAACAAAGACTTTAAGATCATCGAGGAGATGA TTGTTAAGTCACTAATCACAGCACCTCAAACTGGTAGTGAGCTCGCTTTAGGTAAAACCCTTTCTGTAAGCGGACATGCT TGGGCAGGTATGCGTGACGTAGCTAAGGTTGAAGTCAGCTACGACTACGGTACTACGTGGCAAACAGCCGCTTTAACTAA GCCAGTGAACCCAACGGCATGGCAGCAATGGAACATTGACCTTAAGTTACCACAGGCTGGCTACTTTGAGATTTGGGCTC GTGCGACTGACACTAAAGGTGATACTCAGCCTATGGTTCAACCACAGTGGAACCCTAAAGGTTACCTATTTAACGGCTGT CACCGAGTGGCAGTAAGGGTCGTATAA
Upstream 100 bases:
>100_bases AACGCCAAGACAAGACAATGAGTAAAGTCGCCAAGCTGCTAACAGAAGAGCAGATGCAGGCAATGGCGGATTATTTCAAT ACCGGGAAGGAACAAGACTA
Downstream 100 bases:
>100_bases TGAGAAAGACTCTGTTTACGGCAAGCCTGCTTGCCTTAAGTTGCCTCTCTCCTGCGATGGCTGCCGATGCAGCCAAGAGC TATCCCGTCGACCCTGAGTC
Product: molybdopterin-binding oxidoreductase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Sulfite Dehydrogenase Subunit SorA Apoprotein; Nitrate Reductase; Oxidoreductase; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Membrane-Bound Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Molybdopterin Dependent Oxidoreductase; Sulfur Oxidation Protein SoxC; Mo-Co Oxidoreductase Dimerisation Subunit; Molybdopterin Oxidoreductase; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sulfite Reductase; Molybdopterin Oxidoreductase Domain-Containing Protein; Sulfite Oxidase Or ; Oxidase; Sulfite Oxidase Molybdopterin Subunit; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MAIDRRNFLKGAAATSVTAMLPLNWAFASNRPAGIEPMDVSAVKWKSVDDLPSHFKVLNSSPLNAFPPEHLLAPVKTPAD VAFIRWNGKMPEFDKIDPDTWEFTVDGESIETPKTYTIAELKKKFKTHTQQLVLECGGNSRENFYPNAKGNQWSNTAVFC AEWTGVLIKDVLADCGVKSDAVYTAHYGADKHISGKGAAISRGVPIDAAMNENGMIAWGMNGEDIPYMHGYPLRIVFGGR PGSVSQKCATGMGVRDRVHDGKKMGAPAYQVPKYPVAPGEKVDNKDFKIIEEMIVKSLITAPQTGSELALGKTLSVSGHA WAGMRDVAKVEVSYDYGTTWQTAALTKPVNPTAWQQWNIDLKLPQAGYFEIWARATDTKGDTQPMVQPQWNPKGYLFNGC HRVAVRVV
Sequences:
>Translated_408_residues MAIDRRNFLKGAAATSVTAMLPLNWAFASNRPAGIEPMDVSAVKWKSVDDLPSHFKVLNSSPLNAFPPEHLLAPVKTPAD VAFIRWNGKMPEFDKIDPDTWEFTVDGESIETPKTYTIAELKKKFKTHTQQLVLECGGNSRENFYPNAKGNQWSNTAVFC AEWTGVLIKDVLADCGVKSDAVYTAHYGADKHISGKGAAISRGVPIDAAMNENGMIAWGMNGEDIPYMHGYPLRIVFGGR PGSVSQKCATGMGVRDRVHDGKKMGAPAYQVPKYPVAPGEKVDNKDFKIIEEMIVKSLITAPQTGSELALGKTLSVSGHA WAGMRDVAKVEVSYDYGTTWQTAALTKPVNPTAWQQWNIDLKLPQAGYFEIWARATDTKGDTQPMVQPQWNPKGYLFNGC HRVAVRVV >Mature_407_residues AIDRRNFLKGAAATSVTAMLPLNWAFASNRPAGIEPMDVSAVKWKSVDDLPSHFKVLNSSPLNAFPPEHLLAPVKTPADV AFIRWNGKMPEFDKIDPDTWEFTVDGESIETPKTYTIAELKKKFKTHTQQLVLECGGNSRENFYPNAKGNQWSNTAVFCA EWTGVLIKDVLADCGVKSDAVYTAHYGADKHISGKGAAISRGVPIDAAMNENGMIAWGMNGEDIPYMHGYPLRIVFGGRP GSVSQKCATGMGVRDRVHDGKKMGAPAYQVPKYPVAPGEKVDNKDFKIIEEMIVKSLITAPQTGSELALGKTLSVSGHAW AGMRDVAKVEVSYDYGTTWQTAALTKPVNPTAWQQWNIDLKLPQAGYFEIWARATDTKGDTQPMVQPQWNPKGYLFNGCH RVAVRVV
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=372, Percent_Identity=30.9139784946237, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI74099702, Length=372, Percent_Identity=30.9139784946237, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI74099694, Length=372, Percent_Identity=30.9139784946237, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71992535, Length=366, Percent_Identity=31.1475409836066, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI18859905, Length=383, Percent_Identity=28.7206266318538, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44817; Mature: 44686
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDRRNFLKGAAATSVTAMLPLNWAFASNRPAGIEPMDVSAVKWKSVDDLPSHFKVLNS CCCCHHHHHCCHHHHEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCC SPLNAFPPEHLLAPVKTPADVAFIRWNGKMPEFDKIDPDTWEFTVDGESIETPKTYTIAE CCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHH LKKKFKTHTQQLVLECGGNSRENFYPNAKGNQWSNTAVFCAEWTGVLIKDVLADCGVKSD HHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCC AVYTAHYGADKHISGKGAAISRGVPIDAAMNENGMIAWGMNGEDIPYMHGYPLRIVFGGR EEEEEECCCCCEECCCCCEEECCCCCEEEECCCCEEEECCCCCCCCEECCCCEEEEECCC PGSVSQKCATGMGVRDRVHDGKKMGAPAYQVPKYPVAPGEKVDNKDFKIIEEMIVKSLIT CCCCCHHHHHCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC APQTGSELALGKTLSVSGHAWAGMRDVAKVEVSYDYGTTWQTAALTKPVNPTAWQQWNID CCCCCCCEECCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEHEECCCCCCCCCEEEEEE LKLPQAGYFEIWARATDTKGDTQPMVQPQWNPKGYLFNGCHRVAVRVV EECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCEEEEEEEEC >Mature Secondary Structure AIDRRNFLKGAAATSVTAMLPLNWAFASNRPAGIEPMDVSAVKWKSVDDLPSHFKVLNS CCCHHHHHCCHHHHEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCC SPLNAFPPEHLLAPVKTPADVAFIRWNGKMPEFDKIDPDTWEFTVDGESIETPKTYTIAE CCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHH LKKKFKTHTQQLVLECGGNSRENFYPNAKGNQWSNTAVFCAEWTGVLIKDVLADCGVKSD HHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCC AVYTAHYGADKHISGKGAAISRGVPIDAAMNENGMIAWGMNGEDIPYMHGYPLRIVFGGR EEEEEECCCCCEECCCCCEEECCCCCEEEECCCCEEEECCCCCCCCEECCCCEEEEECCC PGSVSQKCATGMGVRDRVHDGKKMGAPAYQVPKYPVAPGEKVDNKDFKIIEEMIVKSLIT CCCCCHHHHHCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC APQTGSELALGKTLSVSGHAWAGMRDVAKVEVSYDYGTTWQTAALTKPVNPTAWQQWNID CCCCCCCEECCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEHEECCCCCCCCCEEEEEE LKLPQAGYFEIWARATDTKGDTQPMVQPQWNPKGYLFNGCHRVAVRVV EECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA