| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960808
Identifier: 157960808
GI number: 157960808
Start: 1193497
End: 1193886
Strand: Reverse
Name: 157960808
Synonym: Spea_0980
Alternate gene names: NA
Gene position: 1193886-1193497 (Counterclockwise)
Preceding gene: 157960809
Following gene: 157960807
Centisome position: 23.07
GC content: 47.44
Gene sequence:
>390_bases ATGAGAAAGACTCTGTTTACGGCAAGCCTGCTTGCCTTAAGTTGCCTCTCTCCTGCGATGGCTGCCGATGCAGCCAAGAG CTATCCCGTCGACCCTGAGTCAGGCCTTATTATGGCACCGGGTTGGGAGATGGTTAACTATCAATGTAACGCTTGCCATA CCACGTCAATTATCCCGCAGAACAAGGGTAACCGTGAAGTTTGGCGCGATACCATTCAGTGGATGGTTGATACTCAGGGC CTTTGGGACTTATCTGATACTTGGGATCCTGTTCTAGATTACCTATCGACTTATTATGATGAGACAGGTATCGACATGAA GATCTTTAGACGCAAGCCTTTGGACGCAAATCAAATGCCGCCAATGCCTTCTTCGAATGAGGAAAATTAA
Upstream 100 bases:
>100_bases CTGACACTAAAGGTGATACTCAGCCTATGGTTCAACCACAGTGGAACCCTAAAGGTTACCTATTTAACGGCTGTCACCGA GTGGCAGTAAGGGTCGTATA
Downstream 100 bases:
>100_bases CATGTTGAATCATTATTCGAAGTCTGTGTTAGCCGCCAGCTTGTCATTATTGCTATCAGCAAGCGTATCGGCTCAAGTGA CCGATACCTCGTTTAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MRKTLFTASLLALSCLSPAMAADAAKSYPVDPESGLIMAPGWEMVNYQCNACHTTSIIPQNKGNREVWRDTIQWMVDTQG LWDLSDTWDPVLDYLSTYYDETGIDMKIFRRKPLDANQMPPMPSSNEEN
Sequences:
>Translated_129_residues MRKTLFTASLLALSCLSPAMAADAAKSYPVDPESGLIMAPGWEMVNYQCNACHTTSIIPQNKGNREVWRDTIQWMVDTQG LWDLSDTWDPVLDYLSTYYDETGIDMKIFRRKPLDANQMPPMPSSNEEN >Mature_129_residues MRKTLFTASLLALSCLSPAMAADAAKSYPVDPESGLIMAPGWEMVNYQCNACHTTSIIPQNKGNREVWRDTIQWMVDTQG LWDLSDTWDPVLDYLSTYYDETGIDMKIFRRKPLDANQMPPMPSSNEEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14625; Mature: 14625
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTLFTASLLALSCLSPAMAADAAKSYPVDPESGLIMAPGWEMVNYQCNACHTTSIIPQ CCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCEECCCCCCC NKGNREVWRDTIQWMVDTQGLWDLSDTWDPVLDYLSTYYDETGIDMKIFRRKPLDANQMP CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC PMPSSNEEN CCCCCCCCC >Mature Secondary Structure MRKTLFTASLLALSCLSPAMAADAAKSYPVDPESGLIMAPGWEMVNYQCNACHTTSIIPQ CCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCEECCCCCCC NKGNREVWRDTIQWMVDTQGLWDLSDTWDPVLDYLSTYYDETGIDMKIFRRKPLDANQMP CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC PMPSSNEEN CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA