| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is bax [H]
Identifier: 157960806
GI number: 157960806
Start: 1191649
End: 1192713
Strand: Reverse
Name: bax [H]
Synonym: Spea_0978
Alternate gene names: 157960806
Gene position: 1192713-1191649 (Counterclockwise)
Preceding gene: 157960807
Following gene: 157960805
Centisome position: 23.05
GC content: 46.38
Gene sequence:
>1065_bases ATGCTTAAGAAGCCTCAAACACTCATCGCTCTAACCTTGATAGCCATTGCATTAATTCTTTATGCGGCCAACTCACAGTT CAACCCAGATAGCAGCCAGCCGGTGATTATTCAACAAACAGTTCAAGACACTATTCAAGACACAGTTAAGCCAACAGCTA AAACGGTTGCCGCCGATCTTGCCACTCCAGTTGATTCCGACGCCACCCAAACCAGCTTTATAAAAGTATCTGATAAGCGT CCAACTAAGGCGCCTAAAGATATTCGAATCAACTCTCTCGATGAGCTGATGGCACTATTTAACTCACTCAATTACAACAC TCAAAGCTGGCAGCAAGGCAATCGCGAAGTGCCGAGGCTGACCTTTGAGTCTGTCAGTGAGCGCTGGCAAAAAACCTCGA ATCAAATTCCCGTGCAACAGAAGAAGATGGTGTTTTTCCGTCTGTTAGCACCATTAATCTTGGTGGCAAACGAAAATATT CTTTTAGAGCGCCGCCTGATTGAAACTGCGCCGTTAGATGATGTGGTGTTACAAAGAATCGCCCTAAAGTACAAAATCAC TCAAGACGCCGAAACCCTGTTAACTGAGGCTCAAAGGCAAACCTTGCTACAAGAGGTTGATATCATGCCGCCATCGCTTG TTCTTGCTCAAGCTGCTGAAGAGAGCGGCTGGGCAACCTCTCGCTTTACCGTTGAAGGCAATGCGTTTTTCGGCCAGTGG GACTTTAGCGGCAAGGGCATGATCCCCAAACAGCAACGTAAAGAGTTAGGCAACTATGGCTTAGCCCGCTTCGATACACC GCAGGCTTCTGTAGAGGGGTATATGCTGAACCTTAATACCAACAACGCCTATAAAAAACTCAGAAAATTGCGGGCAAGTC TACGCGCAGTCAATAAGCCTATTACAGGCTTAGAGCTTGCAGGCACTTTAGATAAATATTCCGAGCGCGGCCAAGCCTAT ATCGATGGTATTCGCGAAATGATCCGCTATAACAAGTTAGATCAAGTCGATGAGGCCTATTTAAGTGATGCTGCGCCACT GCATTTAATCCCAAGACCAGACTAA
Upstream 100 bases:
>100_bases AACAGCACACCTTCAGAGTTTACAATTTGGCAACAATGACGGAGTATGTAGATGCTCTCGATTAAAAATACACAAGGTCA TTCAACATAAAGGACTGTTT
Downstream 100 bases:
>100_bases TACCTAAACAGCTAGTAGGCGCATTCTCGATAAGAGAAGCGCCTTTTAGTCATGATATCAGTGTGATAGTCGCCATTCAC CTCGCTGCGATACAAAACGC
Product: FlgJ-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MLKKPQTLIALTLIAIALILYAANSQFNPDSSQPVIIQQTVQDTIQDTVKPTAKTVAADLATPVDSDATQTSFIKVSDKR PTKAPKDIRINSLDELMALFNSLNYNTQSWQQGNREVPRLTFESVSERWQKTSNQIPVQQKKMVFFRLLAPLILVANENI LLERRLIETAPLDDVVLQRIALKYKITQDAETLLTEAQRQTLLQEVDIMPPSLVLAQAAEESGWATSRFTVEGNAFFGQW DFSGKGMIPKQQRKELGNYGLARFDTPQASVEGYMLNLNTNNAYKKLRKLRASLRAVNKPITGLELAGTLDKYSERGQAY IDGIREMIRYNKLDQVDEAYLSDAAPLHLIPRPD
Sequences:
>Translated_354_residues MLKKPQTLIALTLIAIALILYAANSQFNPDSSQPVIIQQTVQDTIQDTVKPTAKTVAADLATPVDSDATQTSFIKVSDKR PTKAPKDIRINSLDELMALFNSLNYNTQSWQQGNREVPRLTFESVSERWQKTSNQIPVQQKKMVFFRLLAPLILVANENI LLERRLIETAPLDDVVLQRIALKYKITQDAETLLTEAQRQTLLQEVDIMPPSLVLAQAAEESGWATSRFTVEGNAFFGQW DFSGKGMIPKQQRKELGNYGLARFDTPQASVEGYMLNLNTNNAYKKLRKLRASLRAVNKPITGLELAGTLDKYSERGQAY IDGIREMIRYNKLDQVDEAYLSDAAPLHLIPRPD >Mature_354_residues MLKKPQTLIALTLIAIALILYAANSQFNPDSSQPVIIQQTVQDTIQDTVKPTAKTVAADLATPVDSDATQTSFIKVSDKR PTKAPKDIRINSLDELMALFNSLNYNTQSWQQGNREVPRLTFESVSERWQKTSNQIPVQQKKMVFFRLLAPLILVANENI LLERRLIETAPLDDVVLQRIALKYKITQDAETLLTEAQRQTLLQEVDIMPPSLVLAQAAEESGWATSRFTVEGNAFFGQW DFSGKGMIPKQQRKELGNYGLARFDTPQASVEGYMLNLNTNNAYKKLRKLRASLRAVNKPITGLELAGTLDKYSERGQAY IDGIREMIRYNKLDQVDEAYLSDAAPLHLIPRPD
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=199, Percent_Identity=31.6582914572864, Blast_Score=98, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 39837; Mature: 39837
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKPQTLIALTLIAIALILYAANSQFNPDSSQPVIIQQTVQDTIQDTVKPTAKTVAADL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHH ATPVDSDATQTSFIKVSDKRPTKAPKDIRINSLDELMALFNSLNYNTQSWQQGNREVPRL CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCH TFESVSERWQKTSNQIPVQQKKMVFFRLLAPLILVANENILLERRLIETAPLDDVVLQRI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH ALKYKITQDAETLLTEAQRQTLLQEVDIMPPSLVLAQAAEESGWATSRFTVEGNAFFGQW HHHHEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEE DFSGKGMIPKQQRKELGNYGLARFDTPQASVEGYMLNLNTNNAYKKLRKLRASLRAVNKP CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC ITGLELAGTLDKYSERGQAYIDGIREMIRYNKLDQVDEAYLSDAAPLHLIPRPD CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCC >Mature Secondary Structure MLKKPQTLIALTLIAIALILYAANSQFNPDSSQPVIIQQTVQDTIQDTVKPTAKTVAADL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHH ATPVDSDATQTSFIKVSDKRPTKAPKDIRINSLDELMALFNSLNYNTQSWQQGNREVPRL CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCH TFESVSERWQKTSNQIPVQQKKMVFFRLLAPLILVANENILLERRLIETAPLDDVVLQRI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH ALKYKITQDAETLLTEAQRQTLLQEVDIMPPSLVLAQAAEESGWATSRFTVEGNAFFGQW HHHHEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEE DFSGKGMIPKQQRKELGNYGLARFDTPQASVEGYMLNLNTNNAYKKLRKLRASLRAVNKP CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC ITGLELAGTLDKYSERGQAYIDGIREMIRYNKLDQVDEAYLSDAAPLHLIPRPD CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]