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The map label for this gene is rhtA [H]

Identifier: 157960805

GI number: 157960805

Start: 1189129

End: 1191285

Strand: Reverse

Name: rhtA [H]

Synonym: Spea_0977

Alternate gene names: 157960805

Gene position: 1191285-1189129 (Counterclockwise)

Preceding gene: 157960806

Following gene: 157960803

Centisome position: 23.02

GC content: 46.87

Gene sequence:

>2157_bases
ATGCAGTTTAAGAACTCCATCATTGCGCTATCAATTTCTGCCGCCATCTTTCCAACCTCAGCCGTCGCACAAGACAGCGA
TATCGAAGTCATCACAGTCACCGCGAGTCGAATGGATAAGCCTGTCAGTGCGATTCCAAATACGGTGACCATCATTGACC
AAGAGCAGCTAAACGAGCAGCTTAGAACCACTCAAGATCTCTCGACCATCATAGGTAATCTGGCACCGAGTTTTTCCCCT
AGCCGTCAAAAGATGAGTAATACAGGAGAAACACTGCGTGGCCGTACACCTTTGATTATGATTGATGGTGTACCGCAATC
TAACCCACTGCGCAGCGGTGGCCGCTCAGGCCAAACTATAGATCCGGCCATGATTGAGCGCATTGAGATCATCCATGGAG
CCAATGCCATGCATGGCCTCGGCGCCCAAGGCGGAATTATCAATTACATCACTAAAAAGCCCAGTGGCGATAACGAGCAC
CACGTCAGCTTCGATGTCACAGTGCCAAATAGCTTAGACTCTGATGGCATTAGCTTCGGTACCAGTTATAGCTTCTCCGG
TGAGTCCGAAAACTTGGATATGATAGGCGCTGTAAGCTATCGCAATAACGGTGTTTATTACGATGCTAACGACGAAATGA
TCGGTGTCGATACCACTCAGGGCGAGTCGATGGATAGCCAAAGTATGGATTTTTTCATCAAACTTGGTCATGACTTTGAC
CAATCTCGCCTTGAACTGATGGTGAACCACTACAATATGGAAAATAACGGCGACTACATGGCCGTTAAAGGCGATAAAGA
AAACGACATCCCAACCGGTGCCATCAAGCAAGATCAACCTTGGGACGCCGCAAACAACCAAGTTACCACCACCAGCTTGA
CTTATACCCATGAAGATATCGCCGGTCAGCAACTTAGCCTGCAGTTTTTCAATCAAAATTTCGAAGCCGTCTATGGTGGT
GGTTGTTGGTCAGACTTTTATGACCCAAGCATGGAAGGCAGCGATCAAGTTACCGTGTGTGGCACAGGGGAAAACGGTGA
ATCACTTTACTATGAGCAGTCACGTAACAAGTCTGTCAAATGGGGCATGAAAGCCTCTATGATGGCGAGTAATATTGCCG
ACTCAGGCATGAGTATCGCCTATGGTTTAGACATCTTCCGCGACACTACCGAGCAAGATATGGTGATGAGTGGAGTGTCT
TGGGTTCCAGAGAGTACCTACGACAATATCGCGCCATTTGCGCAGATTGATTACGATCTTATTGAAAACCTAACCCTTTC
TGGTGGCGTGCGTTACGAGTACGCCAAGCTTAACGTCGATGACTACAAGACCATGTATGGCTACGGCAATAAGTACGTTG
AAGGCGGTAACCCTGATTTCAATGAAACCCTGTTTAATATCGGCGCCTCTTACAAAATAACCCCAGCGCTACGGGTTTAT
ACTAGCTTTAGTCAGGGCTTTGGTATGCCTGATGTAGGACGCGTACTGCGCGACGGTGACAACTTTCAAGGACCAAACCC
AAGTATTGAAGACACCTTGGCCCTCGACCCCATTGTCACAGATAACATCGAATTCGGTGCCGATTATCAAGGCGAATACT
TCAGTTCAAAAATTGCCTACTACCGCTCATCGAGTGATTACGGTGCGCGCATGGTCGATAAAGGCGACGGTAGTGGTTCA
TTTGTCATTAAGCGTGAAAAGAGCCTAATCGAAGGCATAGAAGCCAGTGTTACCGCCTACATTGGTGATAATGATGATGT
TGGCGTTAACCTTGCGATTCAAAATGGTGAGTACGACTCCAATGATGACCAGAAGGTGGATACCGATCTCGACGGCGCCA
ATATCTCGCCGAATCGTATTAACCTGTTCTGGAATCATAATTTCGACAACGATATTTCAACTCGTATTCAGGCTAACTTC
TACATGGATAAAGACTTTAAAGACGAGAATAATAACGTCTACGCCAACTTCGATGGCTACACCACGGTTGACGCGTCAAT
TGCTATCCCAGTTTACGACGGCACACTGAGTATCGGCATTCAAAATCTATTGAATGAAGACTATTACACCTACTACTCAC
AAACAGTTGGTAAAGATACTCGCTACTTTAAAGGCATGGGCCGCACCGCGACGATAGGCTTTAGTCTGCCTTTCTAA

Upstream 100 bases:

>100_bases
ATCATTATCATTTAGATTTGTGGCTAGACACGATTAGGGAAGCTTTTCCACTGGACGGAAGTATAAACATAACAGTGTTT
CCACTTAAACGGGATCTCTC

Downstream 100 bases:

>100_bases
TCGCGCTTATCGTATTTACACCTATCGCGTTAGTCTAGAAAGCTAACCAATAAAAAAGCCGTTGGCGTAACACGCTAACG
GCTTTTTTTTGCCTAAAGCA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: TonB-dependent siderophore receptor rhtA [H]

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MQFKNSIIALSISAAIFPTSAVAQDSDIEVITVTASRMDKPVSAIPNTVTIIDQEQLNEQLRTTQDLSTIIGNLAPSFSP
SRQKMSNTGETLRGRTPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKKPSGDNEH
HVSFDVTVPNSLDSDGISFGTSYSFSGESENLDMIGAVSYRNNGVYYDANDEMIGVDTTQGESMDSQSMDFFIKLGHDFD
QSRLELMVNHYNMENNGDYMAVKGDKENDIPTGAIKQDQPWDAANNQVTTTSLTYTHEDIAGQQLSLQFFNQNFEAVYGG
GCWSDFYDPSMEGSDQVTVCGTGENGESLYYEQSRNKSVKWGMKASMMASNIADSGMSIAYGLDIFRDTTEQDMVMSGVS
WVPESTYDNIAPFAQIDYDLIENLTLSGGVRYEYAKLNVDDYKTMYGYGNKYVEGGNPDFNETLFNIGASYKITPALRVY
TSFSQGFGMPDVGRVLRDGDNFQGPNPSIEDTLALDPIVTDNIEFGADYQGEYFSSKIAYYRSSSDYGARMVDKGDGSGS
FVIKREKSLIEGIEASVTAYIGDNDDVGVNLAIQNGEYDSNDDQKVDTDLDGANISPNRINLFWNHNFDNDISTRIQANF
YMDKDFKDENNNVYANFDGYTTVDASIAIPVYDGTLSIGIQNLLNEDYYTYYSQTVGKDTRYFKGMGRTATIGFSLPF

Sequences:

>Translated_718_residues
MQFKNSIIALSISAAIFPTSAVAQDSDIEVITVTASRMDKPVSAIPNTVTIIDQEQLNEQLRTTQDLSTIIGNLAPSFSP
SRQKMSNTGETLRGRTPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKKPSGDNEH
HVSFDVTVPNSLDSDGISFGTSYSFSGESENLDMIGAVSYRNNGVYYDANDEMIGVDTTQGESMDSQSMDFFIKLGHDFD
QSRLELMVNHYNMENNGDYMAVKGDKENDIPTGAIKQDQPWDAANNQVTTTSLTYTHEDIAGQQLSLQFFNQNFEAVYGG
GCWSDFYDPSMEGSDQVTVCGTGENGESLYYEQSRNKSVKWGMKASMMASNIADSGMSIAYGLDIFRDTTEQDMVMSGVS
WVPESTYDNIAPFAQIDYDLIENLTLSGGVRYEYAKLNVDDYKTMYGYGNKYVEGGNPDFNETLFNIGASYKITPALRVY
TSFSQGFGMPDVGRVLRDGDNFQGPNPSIEDTLALDPIVTDNIEFGADYQGEYFSSKIAYYRSSSDYGARMVDKGDGSGS
FVIKREKSLIEGIEASVTAYIGDNDDVGVNLAIQNGEYDSNDDQKVDTDLDGANISPNRINLFWNHNFDNDISTRIQANF
YMDKDFKDENNNVYANFDGYTTVDASIAIPVYDGTLSIGIQNLLNEDYYTYYSQTVGKDTRYFKGMGRTATIGFSLPF
>Mature_718_residues
MQFKNSIIALSISAAIFPTSAVAQDSDIEVITVTASRMDKPVSAIPNTVTIIDQEQLNEQLRTTQDLSTIIGNLAPSFSP
SRQKMSNTGETLRGRTPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKKPSGDNEH
HVSFDVTVPNSLDSDGISFGTSYSFSGESENLDMIGAVSYRNNGVYYDANDEMIGVDTTQGESMDSQSMDFFIKLGHDFD
QSRLELMVNHYNMENNGDYMAVKGDKENDIPTGAIKQDQPWDAANNQVTTTSLTYTHEDIAGQQLSLQFFNQNFEAVYGG
GCWSDFYDPSMEGSDQVTVCGTGENGESLYYEQSRNKSVKWGMKASMMASNIADSGMSIAYGLDIFRDTTEQDMVMSGVS
WVPESTYDNIAPFAQIDYDLIENLTLSGGVRYEYAKLNVDDYKTMYGYGNKYVEGGNPDFNETLFNIGASYKITPALRVY
TSFSQGFGMPDVGRVLRDGDNFQGPNPSIEDTLALDPIVTDNIEFGADYQGEYFSSKIAYYRSSSDYGARMVDKGDGSGS
FVIKREKSLIEGIEASVTAYIGDNDDVGVNLAIQNGEYDSNDDQKVDTDLDGANISPNRINLFWNHNFDNDISTRIQANF
YMDKDFKDENNNVYANFDGYTTVDASIAIPVYDGTLSIGIQNLLNEDYYTYYSQTVGKDTRYFKGMGRTATIGFSLPF

Specific function: Receptor for the siderophore rhizobactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786798, Length=212, Percent_Identity=33.9622641509434, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79174; Mature: 79174

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFKNSIIALSISAAIFPTSAVAQDSDIEVITVTASRMDKPVSAIPNTVTIIDQEQLNEQ
CCCCCEEEEEEEEEEECCCHHHCCCCCEEEEEEEHHHCCCCHHHCCCEEEEEEHHHHHHH
LRTTQDLSTIIGNLAPSFSPSRQKMSNTGETLRGRTPLIMIDGVPQSNPLRSGGRSGQTI
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCC
DPAMIERIEIIHGANAMHGLGAQGGIINYITKKPSGDNEHHVSFDVTVPNSLDSDGISFG
CHHHHHHHHHHCCCCHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC
TSYSFSGESENLDMIGAVSYRNNGVYYDANDEMIGVDTTQGESMDSQSMDFFIKLGHDFD
CEEECCCCCCCCEEEEEEEECCCCEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCC
QSRLELMVNHYNMENNGDYMAVKGDKENDIPTGAIKQDQPWDAANNQVTTTSLTYTHEDI
HHHHHEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHH
AGQQLSLQFFNQNFEAVYGGGCWSDFYDPSMEGSDQVTVCGTGENGESLYYEQSRNKSVK
CCCEEEEEEECCCCEEEECCCCCHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEE
WGMKASMMASNIADSGMSIAYGLDIFRDTTEQDMVMSGVSWVPESTYDNIAPFAQIDYDL
CCCHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCHHH
IENLTLSGGVRYEYAKLNVDDYKTMYGYGNKYVEGGNPDFNETLFNIGASYKITPALRVY
HHCCCCCCCEEEEEEEECCCHHHHHHCCCCEEECCCCCCHHHHHHHCCCCEEECCCEEEE
TSFSQGFGMPDVGRVLRDGDNFQGPNPSIEDTLALDPIVTDNIEFGADYQGEYFSSKIAY
EEHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCCCHHHCEEEE
YRSSSDYGARMVDKGDGSGSFVIKREKSLIEGIEASVTAYIGDNDDVGVNLAIQNGEYDS
EECCCCCCCEEEECCCCCCCEEEEECHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCC
NDDQKVDTDLDGANISPNRINLFWNHNFDNDISTRIQANFYMDKDFKDENNNVYANFDGY
CCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCE
TTVDASIAIPVYDGTLSIGIQNLLNEDYYTYYSQTVGKDTRYFKGMGRTATIGFSLPF
EEECCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MQFKNSIIALSISAAIFPTSAVAQDSDIEVITVTASRMDKPVSAIPNTVTIIDQEQLNEQ
CCCCCEEEEEEEEEEECCCHHHCCCCCEEEEEEEHHHCCCCHHHCCCEEEEEEHHHHHHH
LRTTQDLSTIIGNLAPSFSPSRQKMSNTGETLRGRTPLIMIDGVPQSNPLRSGGRSGQTI
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCC
DPAMIERIEIIHGANAMHGLGAQGGIINYITKKPSGDNEHHVSFDVTVPNSLDSDGISFG
CHHHHHHHHHHCCCCHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC
TSYSFSGESENLDMIGAVSYRNNGVYYDANDEMIGVDTTQGESMDSQSMDFFIKLGHDFD
CEEECCCCCCCCEEEEEEEECCCCEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCC
QSRLELMVNHYNMENNGDYMAVKGDKENDIPTGAIKQDQPWDAANNQVTTTSLTYTHEDI
HHHHHEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHH
AGQQLSLQFFNQNFEAVYGGGCWSDFYDPSMEGSDQVTVCGTGENGESLYYEQSRNKSVK
CCCEEEEEEECCCCEEEECCCCCHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEE
WGMKASMMASNIADSGMSIAYGLDIFRDTTEQDMVMSGVSWVPESTYDNIAPFAQIDYDL
CCCHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCHHH
IENLTLSGGVRYEYAKLNVDDYKTMYGYGNKYVEGGNPDFNETLFNIGASYKITPALRVY
HHCCCCCCCEEEEEEEECCCHHHHHHCCCCEEECCCCCCHHHHHHHCCCCEEECCCEEEE
TSFSQGFGMPDVGRVLRDGDNFQGPNPSIEDTLALDPIVTDNIEFGADYQGEYFSSKIAY
EEHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCCCHHHCEEEE
YRSSSDYGARMVDKGDGSGSFVIKREKSLIEGIEASVTAYIGDNDDVGVNLAIQNGEYDS
EECCCCCCCEEEECCCCCCCEEEEECHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCC
NDDQKVDTDLDGANISPNRINLFWNHNFDNDISTRIQANFYMDKDFKDENNNVYANFDGY
CCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCE
TTVDASIAIPVYDGTLSIGIQNLLNEDYYTYYSQTVGKDTRYFKGMGRTATIGFSLPF
EEECCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]