Click here to switch to the map view.

The map label for this gene is yibI [H]

Identifier: 157960700

GI number: 157960700

Start: 1071648

End: 1072067

Strand: Direct

Name: yibI [H]

Synonym: Spea_0872

Alternate gene names: 157960700

Gene position: 1071648-1072067 (Clockwise)

Preceding gene: 157960698

Following gene: 157960701

Centisome position: 20.71

GC content: 45.0

Gene sequence:

>420_bases
GTGTTTTTAGATTACTTTGCGTTAGGAATTATATTTTTTGTTGCGATTTTCCTCTTCTATGGGGTGATAGCTATTCATGA
CATCCCTTACGAGATCGCTAAGAAGCGTAACCACCCACAGCAAGACGCCTTGCATATTGCAGGTTGGGTAAGCTTGTTTA
CTTTGCATGCCATTTGGCCATTTTTGTGGATCTGGGCAACCCTTTATCGTGAGGATCGCGGCTGGGGATTTCAAGAGGTG
GTCGAAAAAGAGCAAATATTGGAAAGTGAGGTAAAAGGATTGACGGAAAGCGTGAGAAAGTTAGAGCAAAGATTAGCAGA
AATGGAGGCGTCTCAGTGTGGAGCCAAGCCCGTAACCTCGTCAGCCAAGACACAAGCTCCTAATATGACTGATTCTCAAT
CTGACGGCGCAGAGGTGTAA

Upstream 100 bases:

>100_bases
AGTGAAAAAAAATAGAATTGTGTGCTCAATATTGCCAAGATGTTGTTAGAATGTGTTCAGGCTCGATCGCCGTAAATGAC
GGTTTAAAAAGGAGTGCACC

Downstream 100 bases:

>100_bases
CATGGATTTACTACTCGTATTGACCTATACCGCTATCTGCATTGCGATTTTCAAGATATTTAAGATCCCACTGACCAAGT
GGACGGTACCGACCGCCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MFLDYFALGIIFFVAIFLFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHAIWPFLWIWATLYREDRGWGFQEV
VEKEQILESEVKGLTESVRKLEQRLAEMEASQCGAKPVTSSAKTQAPNMTDSQSDGAEV

Sequences:

>Translated_139_residues
MFLDYFALGIIFFVAIFLFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHAIWPFLWIWATLYREDRGWGFQEV
VEKEQILESEVKGLTESVRKLEQRLAEMEASQCGAKPVTSSAKTQAPNMTDSQSDGAEV
>Mature_139_residues
MFLDYFALGIIFFVAIFLFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHAIWPFLWIWATLYREDRGWGFQEV
VEKEQILESEVKGLTESVRKLEQRLAEMEASQCGAKPVTSSAKTQAPNMTDSQSDGAEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yiaW [H]

Homologues:

Organism=Escherichia coli, GI1790025, Length=118, Percent_Identity=57.6271186440678, Blast_Score=152, Evalue=8e-39,
Organism=Escherichia coli, GI1790013, Length=113, Percent_Identity=59.2920353982301, Blast_Score=147, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011223 [H]

Pfam domain/function: PF11742 DUF3302 [H]

EC number: NA

Molecular weight: Translated: 15878; Mature: 15878

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLDYFALGIIFFVAIFLFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHAIWP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FLWIWATLYREDRGWGFQEVVEKEQILESEVKGLTESVRKLEQRLAEMEASQCGAKPVTS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SAKTQAPNMTDSQSDGAEV
CHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFLDYFALGIIFFVAIFLFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHAIWP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FLWIWATLYREDRGWGFQEVVEKEQILESEVKGLTESVRKLEQRLAEMEASQCGAKPVTS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SAKTQAPNMTDSQSDGAEV
CHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8041620; 9278503 [H]