Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yacL [C]

Identifier: 157960656

GI number: 157960656

Start: 1027702

End: 1028073

Strand: Direct

Name: yacL [C]

Synonym: Spea_0828

Alternate gene names: 157960656

Gene position: 1027702-1028073 (Clockwise)

Preceding gene: 157960655

Following gene: 157960659

Centisome position: 19.86

GC content: 40.86

Gene sequence:

>372_bases
ATGGAATACGATTTTTTACGTAATACGATTACCGATACTGTGTTTGCCCGCTTTAGTATGGATCATGAGGCATTAGGTTT
TTGGTTGTCAGAAGAGCTTGCCGATAATAGCGAACTTTATGTTGAGATCTGTCAGCAGATCGAGCGATTACAAAATGGCC
AAGGTAATGAGTGGCGTTTGGTAGGCAAAGCGTTATCGCTTGAATTGGATAGTGAGCAAGCCCGGATCTTTGCCAATGAC
ATCGAAGATAACGATGATCAAGAATTGGATGAATCTATGTCATTTTATGACGGTGAGTCAGAAGCCTTTTGCGGATTAGA
AGACTTTTATGAGGTGATTGTGAACTGGCGTCGTTTCTTAGATGAAAATTGA

Upstream 100 bases:

>100_bases
CGGATACTTGTGACACTTTATCTTGTGCGAATTGGCGCAAGCATAGAGTTATTGGGTTAAAATGACTTTTAGAAGTGATA
TTTAATTTTTGAGTCCAATT

Downstream 100 bases:

>100_bases
TTGCCGATCCTCAGATTTATTTCTGTCCAAATAGGTACAAAAAAAGCAGCCATTGGCTGCTTTTTTGTTTGAAAAGGTGC
GTTACTGATTTAGGTAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRLVGKALSLELDSEQARIFAND
IEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFLDEN

Sequences:

>Translated_123_residues
MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRLVGKALSLELDSEQARIFAND
IEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFLDEN
>Mature_123_residues
MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRLVGKALSLELDSEQARIFAND
IEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFLDEN

Specific function: Unknown

COG id: COG3112

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0231 family [H]

Homologues:

Organism=Escherichia coli, GI87081687, Length=123, Percent_Identity=38.2113821138211, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008249
- ProDom:   PD020773 [H]

Pfam domain/function: PF06062 UPF0231 [H]

EC number: NA

Molecular weight: Translated: 14500; Mature: 14500

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRL
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEE
VGKALSLELDSEQARIFANDIEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFL
EEHHHEEEECCCHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DEN
CCC
>Mature Secondary Structure
MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRL
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEE
VGKALSLELDSEQARIFANDIEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFL
EEHHHEEEECCCHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DEN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA