| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960639
Identifier: 157960639
GI number: 157960639
Start: 1007342
End: 1008724
Strand: Direct
Name: 157960639
Synonym: Spea_0811
Alternate gene names: NA
Gene position: 1007342-1008724 (Clockwise)
Preceding gene: 157960638
Following gene: 157960640
Centisome position: 19.47
GC content: 32.75
Gene sequence:
>1383_bases TTGCCAACTTGTCATCACTGGGGAGGAGCAGACGGAGCAGATTGTAGAGATGTATCTACGGATATCGTATATAAGGATGA AAATGGCCATCATTTTTGTTTGTTACATGCTCCTAAATATTACGTAGCTCCTAAAGGTTTTTTTCTAGGAGATAGAGAAA ATTATTCACCTAAATCTAAAAATATAAGCAAAGATACATTTGATAAGCATCTGGAAACTTTAATAAGTAATCAAAGTTCC AATCCGGACACTAGAATTGATCATATCTATTTCCCATCAAATTTCCCCAACTCGTTTGACAGCTATAAAGAGCCGGAAAG AAGATATTCATTTCATCGCTGTCATAATCTAACTTCTTTTTCGAATAGCCAATTTAAAGCTATTAGAATTCATAACTGTG AAATGGGTGGCTTTCATATTCACAATCTAGAACTAGAAGAGTTAACTTTAACTAGCACCAAGATTATTAAAGACTCAATT CTAAGGGACAGCAAAATAGACACTGTGTCTATTAATCATACAACTTTCGAATGTCCATTTAGGATCTCAAAAATAAAAGA AAAAAATAGTAGCAGTAACTACAAATGTTCAATATATCTCAATGAAGTCAGCTTCAAGCAAGATGTTCAGATCAGCAATA TAGAATTCAATGATGAAAACTCAGAGTTTAGAGTGGTTAACTCTATATTTGAAAGGGATTTATACTACAGCGACAATAAA ATTAATGACTTTATAAACTTCGAATATTGTAAGTTCAATGGTGGTAAAGCATACCTGGAAAATATTGATGTTAGTAAAAT AAAATTATCCAGAATAAACCTTGAGTATATACGTTTCACAAATTGCATTTTTCCTGAACGCTATGAGGAAATAGAGATTG AATCAGCTACGCGAGCAGAAGAAGTATATCGAGATCTTAAGAAAGTCGCCTTCGATCAAAAAGACTATTCTTTGGTATCT AAATGGCATTATTTAGAGAAGGAAATGTTTTTAAATAATCAAAAGGTAGAGAGAAACCATCTCATTAGTATGTTTCTTAC AATATATAAACTTCTTAGCGGTTATGGAGAGAAGCCCTCGCAAGCTTTGAAGTCATTATCCTTATACTTGTTGTTTATTG TAATATCACTAATTACATTAGCAGTTACACACACAGGGATTAGCACTACTATAGACTGGGAAATAGTAAGATCATTGATT TATAGTTTGAGGGATTTCATACCTTTCTTTATTACTCCAACAAAATCGTCGTTGCTTGAGTATATAAGTGGAAATTGGGG GTTAGTATTCGTATACAACTTGATTGCAGCTGTCGGAAGAATATATTGTGTTATGCAGGTTGCTTTGCTTACATTTTCAA TAAGAAACAAAATGAAGCGGTAA
Upstream 100 bases:
>100_bases TCGAGACGCACAGATAATATTTAAAGATGCAGCACAGATAACAACGTTATCTGTGCAGCTATTTAATAAGCTGTTATGCA CCATGAGTAAGGAATAGAAA
Downstream 100 bases:
>100_bases CCGAAGTGCATAACAAGGCGCTGCTGTCGGACAATTTTTCCGCTGCGATCCAAAATTGCCGCAGAGCGCGGCGTTACCCC ATTGGCGCCATATTCTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MPTCHHWGGADGADCRDVSTDIVYKDENGHHFCLLHAPKYYVAPKGFFLGDRENYSPKSKNISKDTFDKHLETLISNQSS NPDTRIDHIYFPSNFPNSFDSYKEPERRYSFHRCHNLTSFSNSQFKAIRIHNCEMGGFHIHNLELEELTLTSTKIIKDSI LRDSKIDTVSINHTTFECPFRISKIKEKNSSSNYKCSIYLNEVSFKQDVQISNIEFNDENSEFRVVNSIFERDLYYSDNK INDFINFEYCKFNGGKAYLENIDVSKIKLSRINLEYIRFTNCIFPERYEEIEIESATRAEEVYRDLKKVAFDQKDYSLVS KWHYLEKEMFLNNQKVERNHLISMFLTIYKLLSGYGEKPSQALKSLSLYLLFIVISLITLAVTHTGISTTIDWEIVRSLI YSLRDFIPFFITPTKSSLLEYISGNWGLVFVYNLIAAVGRIYCVMQVALLTFSIRNKMKR
Sequences:
>Translated_460_residues MPTCHHWGGADGADCRDVSTDIVYKDENGHHFCLLHAPKYYVAPKGFFLGDRENYSPKSKNISKDTFDKHLETLISNQSS NPDTRIDHIYFPSNFPNSFDSYKEPERRYSFHRCHNLTSFSNSQFKAIRIHNCEMGGFHIHNLELEELTLTSTKIIKDSI LRDSKIDTVSINHTTFECPFRISKIKEKNSSSNYKCSIYLNEVSFKQDVQISNIEFNDENSEFRVVNSIFERDLYYSDNK INDFINFEYCKFNGGKAYLENIDVSKIKLSRINLEYIRFTNCIFPERYEEIEIESATRAEEVYRDLKKVAFDQKDYSLVS KWHYLEKEMFLNNQKVERNHLISMFLTIYKLLSGYGEKPSQALKSLSLYLLFIVISLITLAVTHTGISTTIDWEIVRSLI YSLRDFIPFFITPTKSSLLEYISGNWGLVFVYNLIAAVGRIYCVMQVALLTFSIRNKMKR >Mature_459_residues PTCHHWGGADGADCRDVSTDIVYKDENGHHFCLLHAPKYYVAPKGFFLGDRENYSPKSKNISKDTFDKHLETLISNQSSN PDTRIDHIYFPSNFPNSFDSYKEPERRYSFHRCHNLTSFSNSQFKAIRIHNCEMGGFHIHNLELEELTLTSTKIIKDSIL RDSKIDTVSINHTTFECPFRISKIKEKNSSSNYKCSIYLNEVSFKQDVQISNIEFNDENSEFRVVNSIFERDLYYSDNKI NDFINFEYCKFNGGKAYLENIDVSKIKLSRINLEYIRFTNCIFPERYEEIEIESATRAEEVYRDLKKVAFDQKDYSLVSK WHYLEKEMFLNNQKVERNHLISMFLTIYKLLSGYGEKPSQALKSLSLYLLFIVISLITLAVTHTGISTTIDWEIVRSLIY SLRDFIPFFITPTKSSLLEYISGNWGLVFVYNLIAAVGRIYCVMQVALLTFSIRNKMKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53760; Mature: 53628
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTCHHWGGADGADCRDVSTDIVYKDENGHHFCLLHAPKYYVAPKGFFLGDRENYSPKSK CCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEECCCCEEECCCCCCCCCCC NISKDTFDKHLETLISNQSSNPDTRIDHIYFPSNFPNSFDSYKEPERRYSFHRCHNLTSF CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHCCCHHHHHHHHHHHCCCCC SNSQFKAIRIHNCEMGGFHIHNLELEELTLTSTKIIKDSILRDSKIDTVSINHTTFECPF CCCCEEEEEEEECCCCCEEEEEEEHHHEEEHHHHHHHHHHHCCCCCCEEEECCEEEECCH RISKIKEKNSSSNYKCSIYLNEVSFKQDVQISNIEFNDENSEFRVVNSIFERDLYYSDNK HHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCC INDFINFEYCKFNGGKAYLENIDVSKIKLSRINLEYIRFTNCIFPERYEEIEIESATRAE CCCCEEEEEEEECCCCCEECCCCCCEEEEEEECEEEEEEECCCCCCCHHHEECCCHHHHH EVYRDLKKVAFDQKDYSLVSKWHYLEKEMFLNNQKVERNHLISMFLTIYKLLSGYGEKPS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH QALKSLSLYLLFIVISLITLAVTHTGISTTIDWEIVRSLIYSLRDFIPFFITPTKSSLLE HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCEEECCCHHHHHH YISGNWGLVFVYNLIAAVGRIYCVMQVALLTFSIRNKMKR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTCHHWGGADGADCRDVSTDIVYKDENGHHFCLLHAPKYYVAPKGFFLGDRENYSPKSK CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEECCCCEEECCCCCCCCCCC NISKDTFDKHLETLISNQSSNPDTRIDHIYFPSNFPNSFDSYKEPERRYSFHRCHNLTSF CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHCCCHHHHHHHHHHHCCCCC SNSQFKAIRIHNCEMGGFHIHNLELEELTLTSTKIIKDSILRDSKIDTVSINHTTFECPF CCCCEEEEEEEECCCCCEEEEEEEHHHEEEHHHHHHHHHHHCCCCCCEEEECCEEEECCH RISKIKEKNSSSNYKCSIYLNEVSFKQDVQISNIEFNDENSEFRVVNSIFERDLYYSDNK HHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCC INDFINFEYCKFNGGKAYLENIDVSKIKLSRINLEYIRFTNCIFPERYEEIEIESATRAE CCCCEEEEEEEECCCCCEECCCCCCEEEEEEECEEEEEEECCCCCCCHHHEECCCHHHHH EVYRDLKKVAFDQKDYSLVSKWHYLEKEMFLNNQKVERNHLISMFLTIYKLLSGYGEKPS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH QALKSLSLYLLFIVISLITLAVTHTGISTTIDWEIVRSLIYSLRDFIPFFITPTKSSLLE HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCEEECCCHHHHHH YISGNWGLVFVYNLIAAVGRIYCVMQVALLTFSIRNKMKR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA