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The map label for this gene is yhaO [H]

Identifier: 157960638

GI number: 157960638

Start: 1005284

End: 1006612

Strand: Direct

Name: yhaO [H]

Synonym: Spea_0810

Alternate gene names: 157960638

Gene position: 1005284-1006612 (Clockwise)

Preceding gene: 157960637

Following gene: 157960639

Centisome position: 19.43

GC content: 44.17

Gene sequence:

>1329_bases
ATGAGTGAACTAGTTCAAGGCGCACCTAAGGGTGACACCCAAGCGCAACCTCTACACCAACGCGCCAATATGACCAAAGC
CGAATGGCAACAAGCCACTAAGTTCGACAGTGTCGACCTTGGTTGGATTGTGATGAGTATTGGTATGGCTATCGGTGCAG
GTATTGTATTTTTACCTGTTCAGGTTGGCGTGATGGGACTATGGGTATTTTTGCTGTCATCCATTATTGGTTACCCAGCA
ATGTACTTATTTCAAAAGTTATTTATTAACACCTTAGCCGAGTCAAAAAAGTGTACTGATTACCCTGGTGTTATTGAAAA
CTACCTCGGAAAAAACTGGGGTATTGCATTAGGTGTGCTTTATTTCTTGATGTTGGTCATTTGGGTGCTGGTTTACTCGT
TAGCCGTGACCAATGACAGTGCCTCTTACCTGCATTCATTTGGCGTCACTGAGGGCAAGCTTAGTGACAATGTATTCTAT
GGTTTAGGCTTAATCTGCATATTGGCTTTTATCGGCTCAAAAGGCGAAAAGCTGCTATTTAAACTGTCTGGTTTTATGGC
AGTGACAGTGCTGACGCTGGTGGCAGTAATGGGAGTATTGTTGATGGCGCGCTGGGATATGGCGAATATTCCAAGTATGG
GTGAGTTTGGCCCAATGCTGAAGAATGCCATTATTACCCTACCATTTACCTTAACCTCGATTCTGTTTATCCAATCGTTA
AGCCCTATGGTTATCTCGTATCGCTCACATGAAAAGTCGATTGAGGTTGCGCGTTTCAAGGCTGAGCGAGCAATGAAAAT
TGCCTTTGCCATCTTATTCGTGGTGGTGTTCTTCTTCGCAGTATCGTTCACCTTTGCCATTAGCCAAGCGCAAGCAACTG
AGGCGATGAACCAGAATATCTCTGCACTGGCGATTATTGCACAGTACTTCCCTGGCAGCTGGGCGACTATCACCGGTATC
GTGATTAACATCTTTGCGGTTGTAACCTCGTTCTTCGGTGTGTTCTTAGCATTCCAAGAAGCCTGTCGTGGTATTGCAAT
GAACATACTGCTGCGCAGCCGTAAAGAATCTGATATCAACAAAGAGCTAGTTAATAAACTTATCACCGTCTTCATTATCT
TACTGGCTTGGTCTGCGATTGCCTTAAATGCACCAATCCTGTCGTTCACATCTATCTGTAGCCCTATCTTCGGTTTAGTG
GGCTGTTTAATTCCAGCTTACTTGGTGTACAAGGTGCCACACTTGAACAAATATAAGGGTTGGGCGACGAATCTGATTAT
TGTGACGGGTGTTTTGTTGTGTATCTCACCTTTGTTAGCGTTTATGTAA

Upstream 100 bases:

>100_bases
CAAACGCTGTAAAATCATGTGTTCTCATAAACATAAACATAACCATAATTATAATTTTTATCATATCAGTGGCTCTAGCC
AAATTTAATGGAATTGATAT

Downstream 100 bases:

>100_bases
TTGCTGATTAGCAATTTGGCTAATCAAGCTGGCGCTTGGGCTTTAGTAATCAAACTTCGTTTGATGAAAGTGATTAAGTT
AGACTGCGTCTAACAATTAA

Product: serine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSELVQGAPKGDTQAQPLHQRANMTKAEWQQATKFDSVDLGWIVMSIGMAIGAGIVFLPVQVGVMGLWVFLLSSIIGYPA
MYLFQKLFINTLAESKKCTDYPGVIENYLGKNWGIALGVLYFLMLVIWVLVYSLAVTNDSASYLHSFGVTEGKLSDNVFY
GLGLICILAFIGSKGEKLLFKLSGFMAVTVLTLVAVMGVLLMARWDMANIPSMGEFGPMLKNAIITLPFTLTSILFIQSL
SPMVISYRSHEKSIEVARFKAERAMKIAFAILFVVVFFFAVSFTFAISQAQATEAMNQNISALAIIAQYFPGSWATITGI
VINIFAVVTSFFGVFLAFQEACRGIAMNILLRSRKESDINKELVNKLITVFIILLAWSAIALNAPILSFTSICSPIFGLV
GCLIPAYLVYKVPHLNKYKGWATNLIIVTGVLLCISPLLAFM

Sequences:

>Translated_442_residues
MSELVQGAPKGDTQAQPLHQRANMTKAEWQQATKFDSVDLGWIVMSIGMAIGAGIVFLPVQVGVMGLWVFLLSSIIGYPA
MYLFQKLFINTLAESKKCTDYPGVIENYLGKNWGIALGVLYFLMLVIWVLVYSLAVTNDSASYLHSFGVTEGKLSDNVFY
GLGLICILAFIGSKGEKLLFKLSGFMAVTVLTLVAVMGVLLMARWDMANIPSMGEFGPMLKNAIITLPFTLTSILFIQSL
SPMVISYRSHEKSIEVARFKAERAMKIAFAILFVVVFFFAVSFTFAISQAQATEAMNQNISALAIIAQYFPGSWATITGI
VINIFAVVTSFFGVFLAFQEACRGIAMNILLRSRKESDINKELVNKLITVFIILLAWSAIALNAPILSFTSICSPIFGLV
GCLIPAYLVYKVPHLNKYKGWATNLIIVTGVLLCISPLLAFM
>Mature_441_residues
SELVQGAPKGDTQAQPLHQRANMTKAEWQQATKFDSVDLGWIVMSIGMAIGAGIVFLPVQVGVMGLWVFLLSSIIGYPAM
YLFQKLFINTLAESKKCTDYPGVIENYLGKNWGIALGVLYFLMLVIWVLVYSLAVTNDSASYLHSFGVTEGKLSDNVFYG
LGLICILAFIGSKGEKLLFKLSGFMAVTVLTLVAVMGVLLMARWDMANIPSMGEFGPMLKNAIITLPFTLTSILFIQSLS
PMVISYRSHEKSIEVARFKAERAMKIAFAILFVVVFFFAVSFTFAISQAQATEAMNQNISALAIIAQYFPGSWATITGIV
INIFAVVTSFFGVFLAFQEACRGIAMNILLRSRKESDINKELVNKLITVFIILLAWSAIALNAPILSFTSICSPIFGLVG
CLIPAYLVYKVPHLNKYKGWATNLIIVTGVLLCISPLLAFM

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693183, Length=424, Percent_Identity=68.6320754716981, Blast_Score=588, Evalue=1e-169,
Organism=Escherichia coli, GI1789961, Length=407, Percent_Identity=42.997542997543, Blast_Score=348, Evalue=3e-97,
Organism=Escherichia coli, GI1789160, Length=420, Percent_Identity=25.7142857142857, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1789211, Length=398, Percent_Identity=23.6180904522613, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1789504, Length=435, Percent_Identity=25.0574712643678, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004694 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48506; Mature: 48374

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SELVQGAPKGDTQAQPLHQRANMTKAEWQQATKFDSVDLGWIVMSIGMAIGAGIVFLPV
CCHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH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HHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]