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The map label for this gene is ygdL [H]

Identifier: 157960420

GI number: 157960420

Start: 725925

End: 726725

Strand: Direct

Name: ygdL [H]

Synonym: Spea_0591

Alternate gene names: 157960420

Gene position: 725925-726725 (Clockwise)

Preceding gene: 157960417

Following gene: 157960421

Centisome position: 14.03

GC content: 46.57

Gene sequence:

>801_bases
TTGTCAGACGCTTATTTAAATCGCTTTGCCGGTATCGGCCGCTTATATGGTCAGCACGCTTTAAGCTTTTTTGCTCAGGC
TCATGTGGTCGTTGTTGGGATCGGTGGGGTCGGCACTTGGGTGGCAGAATCTTTGGCTAGAAGCGGTATTGGACAGATCA
CCCTTATTGATTTAGACGATATCTGTGTGACTAACACCAACAGACAAGCTCATGCGTTAAAAGACACTATAGGTGAGTCT
AAAGTCGAAGTGATGGCTCAGCGCTTAAAACAGATTAACCCTGAGTGTATTGTGAATGAAGTAGAAGACTTTATTACACC
AGAGAACTTGTCTGAATATTTTCAAGGTAAGAAGCAAGGCGGCAACATCGATTATGTGGTGGATTGTATCGACTCGGTTA
AAGCCAAGACAGCCTTGATAGCCTGGTGTAAACGCCAGAAATTGCCGATTGTGACTGTTGGTGGGGCAGGTGGTCAGATG
GACCCGACTCAGGTGCAGGTTGCTGATTTGGCCAAGACTTATCAAGATCCGCTATTGGCCAAAGTTCGCAACTTGCTAAG
ACGTGAGTATAATTTCTCAAAAAATGTAGCCCGCCGTTTTGCCATTGAAGCGGTATTTTCAACTGAGCAACTGGTATATC
CGCAAGCAGATGGCACCGTATGCAGCACTAAGGCTACAGCGGAAGGCAGTATGAGAATGGATTGTGCGTCGGGTTTTGGT
GCCGTGACTGTGGTTACTGGTACTTTCGGTTTTGTTGCCACGAGCCGTGTATTAACTAAGCTTGCCGCTAAGGCTCAATA
G

Upstream 100 bases:

>100_bases
GGTTTGTTTTTTTAGGCTTTTATCGGCTTTTGAGATAAAATCAGTACTAAGCTTCACTTCCTACTTTTTTACATTGAGTA
TCATTTTGAATAATCACACC

Downstream 100 bases:

>100_bases
CTATCTGCTGATATAAATAGTGCTAGCTCTAATTGGGCTTAAGCTAAGGCTAGACTATAGTAGTTAATAAATCCGCACAC
AAAATAGAGAGGCGCTAATT

Product: UBA/THIF-type NAD/FAD-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSDAYLNRFAGIGRLYGQHALSFFAQAHVVVVGIGGVGTWVAESLARSGIGQITLIDLDDICVTNTNRQAHALKDTIGES
KVEVMAQRLKQINPECIVNEVEDFITPENLSEYFQGKKQGGNIDYVVDCIDSVKAKTALIAWCKRQKLPIVTVGGAGGQM
DPTQVQVADLAKTYQDPLLAKVRNLLRREYNFSKNVARRFAIEAVFSTEQLVYPQADGTVCSTKATAEGSMRMDCASGFG
AVTVVTGTFGFVATSRVLTKLAAKAQ

Sequences:

>Translated_266_residues
MSDAYLNRFAGIGRLYGQHALSFFAQAHVVVVGIGGVGTWVAESLARSGIGQITLIDLDDICVTNTNRQAHALKDTIGES
KVEVMAQRLKQINPECIVNEVEDFITPENLSEYFQGKKQGGNIDYVVDCIDSVKAKTALIAWCKRQKLPIVTVGGAGGQM
DPTQVQVADLAKTYQDPLLAKVRNLLRREYNFSKNVARRFAIEAVFSTEQLVYPQADGTVCSTKATAEGSMRMDCASGFG
AVTVVTGTFGFVATSRVLTKLAAKAQ
>Mature_265_residues
SDAYLNRFAGIGRLYGQHALSFFAQAHVVVVGIGGVGTWVAESLARSGIGQITLIDLDDICVTNTNRQAHALKDTIGESK
VEVMAQRLKQINPECIVNEVEDFITPENLSEYFQGKKQGGNIDYVVDCIDSVKAKTALIAWCKRQKLPIVTVGGAGGQMD
PTQVQVADLAKTYQDPLLAKVRNLLRREYNFSKNVARRFAIEAVFSTEQLVYPQADGTVCSTKATAEGSMRMDCASGFGA
VTVVTGTFGFVATSRVLTKLAAKAQ

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=265, Percent_Identity=61.8867924528302, Blast_Score=353, Evalue=5e-99,
Organism=Escherichia coli, GI1787048, Length=160, Percent_Identity=33.125, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87082356, Length=148, Percent_Identity=31.7567567567568, Blast_Score=74, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321790, Length=250, Percent_Identity=27.2, Blast_Score=103, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6322825, Length=233, Percent_Identity=27.0386266094421, Blast_Score=96, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24582879, Length=138, Percent_Identity=30.4347826086957, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24660640, Length=148, Percent_Identity=28.3783783783784, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 28775; Mature: 28644

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAYLNRFAGIGRLYGQHALSFFAQAHVVVVGIGGVGTWVAESLARSGIGQITLIDLDD
CCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCC
ICVTNTNRQAHALKDTIGESKVEVMAQRLKQINPECIVNEVEDFITPENLSEYFQGKKQG
EEEECCCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCC
GNIDYVVDCIDSVKAKTALIAWCKRQKLPIVTVGGAGGQMDPTQVQVADLAKTYQDPLLA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHH
KVRNLLRREYNFSKNVARRFAIEAVFSTEQLVYPQADGTVCSTKATAEGSMRMDCASGFG
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCEEEHHCCCC
AVTVVTGTFGFVATSRVLTKLAAKAQ
EEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDAYLNRFAGIGRLYGQHALSFFAQAHVVVVGIGGVGTWVAESLARSGIGQITLIDLDD
CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCC
ICVTNTNRQAHALKDTIGESKVEVMAQRLKQINPECIVNEVEDFITPENLSEYFQGKKQG
EEEECCCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCC
GNIDYVVDCIDSVKAKTALIAWCKRQKLPIVTVGGAGGQMDPTQVQVADLAKTYQDPLLA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHH
KVRNLLRREYNFSKNVARRFAIEAVFSTEQLVYPQADGTVCSTKATAEGSMRMDCASGFG
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCEEEHHCCCC
AVTVVTGTFGFVATSRVLTKLAAKAQ
EEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]