| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960421
Identifier: 157960421
GI number: 157960421
Start: 726936
End: 727553
Strand: Direct
Name: 157960421
Synonym: Spea_0592
Alternate gene names: NA
Gene position: 726936-727553 (Clockwise)
Preceding gene: 157960420
Following gene: 157960423
Centisome position: 14.05
GC content: 43.69
Gene sequence:
>618_bases ATGCAAAAAGTGGCTTTCAATACATCTTCTTTTAAAATGATCTCAGCTAAAAAGTTGATTTTTACCAGCATGCTATGGCT AACACTGGCCTGTGCAGGGCTATTGCTCGCACCACAAACACTGCTGGCCCAGCTAAGTTTAGATGAGTTATTACAAAATC ATGCTCATTTTATTGGCTTGGGTCTGATCATCGGTGCCGCTTATTTATTGACGCTGCTGCTCAACTATTTTCTCGACGAA GCGATTAGCTACTTTAGTGACAAACGTTCGGTAGAGGTAATAGAAGAGAAGGTGAAGCTACTCGATCCAATGGAACGTGC TTTATTGAGAGAGTTTTTTCTGCAAGGGGAAACCATTCTTACTTTGCCAGAACAAGAGCCTGCAGTTAAGAGTTTGTCTA AGGCTGGAATTTTGGAGTATTTAGGTAACCAGCAACATTACGCGATTCAGGGATCTACTGCAGACTTTAAGATTTCGATG CGTGCAAGGGTTCACTTAAACCGCCAGGTATTGCGCTTCCCTGTTGGCGAGCCAAGCGCTGAAGAGATGAAAAACCTGAT TAAGGCGCGCCCACATTTCGTTAATACTCTGGTCGCACCAAGAAAACATGCAGCCTAG
Upstream 100 bases:
>100_bases TTTGTGTCTAGTCATTTGAAATTATTCGATTCAGTGAGAATGCTGGCACTATTATTGCTTTTACTTGCGTAGGAACAGAA TTCTGACACTGGATACGGCT
Downstream 100 bases:
>100_bases AGTGTCATTTAGAATTTAATAACTTTGGTTGCGGAAGTTTGTTTGGACAAAAAAATGGGGGCTAATTGCCCCCTGCATTA GAAAGAACATTGAAAACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MQKVAFNTSSFKMISAKKLIFTSMLWLTLACAGLLLAPQTLLAQLSLDELLQNHAHFIGLGLIIGAAYLLTLLLNYFLDE AISYFSDKRSVEVIEEKVKLLDPMERALLREFFLQGETILTLPEQEPAVKSLSKAGILEYLGNQQHYAIQGSTADFKISM RARVHLNRQVLRFPVGEPSAEEMKNLIKARPHFVNTLVAPRKHAA
Sequences:
>Translated_205_residues MQKVAFNTSSFKMISAKKLIFTSMLWLTLACAGLLLAPQTLLAQLSLDELLQNHAHFIGLGLIIGAAYLLTLLLNYFLDE AISYFSDKRSVEVIEEKVKLLDPMERALLREFFLQGETILTLPEQEPAVKSLSKAGILEYLGNQQHYAIQGSTADFKISM RARVHLNRQVLRFPVGEPSAEEMKNLIKARPHFVNTLVAPRKHAA >Mature_205_residues MQKVAFNTSSFKMISAKKLIFTSMLWLTLACAGLLLAPQTLLAQLSLDELLQNHAHFIGLGLIIGAAYLLTLLLNYFLDE AISYFSDKRSVEVIEEKVKLLDPMERALLREFFLQGETILTLPEQEPAVKSLSKAGILEYLGNQQHYAIQGSTADFKISM RARVHLNRQVLRFPVGEPSAEEMKNLIKARPHFVNTLVAPRKHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23022; Mature: 23022
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKVAFNTSSFKMISAKKLIFTSMLWLTLACAGLLLAPQTLLAQLSLDELLQNHAHFIGL CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIIGAAYLLTLLLNYFLDEAISYFSDKRSVEVIEEKVKLLDPMERALLREFFLQGETIL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEE TLPEQEPAVKSLSKAGILEYLGNQQHYAIQGSTADFKISMRARVHLNRQVLRFPVGEPSA ECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCH EEMKNLIKARPHFVNTLVAPRKHAA HHHHHHHHHCCHHHHHHHCCCCCCC >Mature Secondary Structure MQKVAFNTSSFKMISAKKLIFTSMLWLTLACAGLLLAPQTLLAQLSLDELLQNHAHFIGL CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIIGAAYLLTLLLNYFLDEAISYFSDKRSVEVIEEKVKLLDPMERALLREFFLQGETIL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEE TLPEQEPAVKSLSKAGILEYLGNQQHYAIQGSTADFKISMRARVHLNRQVLRFPVGEPSA ECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCH EEMKNLIKARPHFVNTLVAPRKHAA HHHHHHHHHCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA