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The map label for this gene is yidK [H]

Identifier: 157960407

GI number: 157960407

Start: 708196

End: 709617

Strand: Reverse

Name: yidK [H]

Synonym: Spea_0578

Alternate gene names: 157960407

Gene position: 709617-708196 (Counterclockwise)

Preceding gene: 157960408

Following gene: 157960406

Centisome position: 13.71

GC content: 47.33

Gene sequence:

>1422_bases
ATGGAACACACTATTCAACTGGTTATATTTTTTGGCCTAACCGCCTTGGTAGGTTTAATCACCTACCTAAAATGCCGCAA
AGTCACCCGCGATAGCAGCGACAGCAAAGACTACTTTCTTGCCGGCGGAGGCTTAAGCTGGGTAGTAGTTGCTGGCTCAT
TGATGATGACTAACATCAGCGCCGAACAGATAGTGGGCATGAACGGCGCACAAACCTTGCTAGTCGCTTGGTGGGAGATC
GCCGCGGCGGTGGGACTCATCATACTAGCAAAATGGCTGATCCCAATCTATTACAAGTATAACTGCACCACGACAACCGA
ACTGCTTGAGCGCAAGTATCAAGACAAGGGGATCCGCGCTATGGTGTCGGTGCTGTTTATGCTCGGCTACGCCTTCATTT
TATTACCTGTAGTGCTATACACAGGCTCGTTATTTATGAAGTCTATGTTTGGCTTATCTATATCAGTAACCATGCTAGCG
ATCATTTTTGCCGTTGTCGGTGCCATCTATGCGATTTTTGGCGGTCTAAGAGCCATAGCCATCTCCGATAGCCTCAACGG
TATTGGTTTGCTGCTCATGGGGATCGTGGTCTCCTATCTGGCACTCAACGCCGTCAATTGGGATCTGTCTGGCATCCCTA
TCGAACGTGTCACCTTGATTGGTGATACTCAGTCAGATATTCCTTGGCATACCCTATTAACCGGTATGATCTTCATTCAG
ATCTTCTACTGGGGCACCAACATGGTGATCACCCAAAGAGCCCTAGCAGCCAAGTCAGTTGAAGAGGCGCAAAAAGGCCT
CTATGCAGCTGTAGTCATGAAGCTAATTATTCCTATTATCGTGGTATTACCAGGGCTTGTGGCCTACAAACTTTATGGTG
ATGTAGGTGATGTTGCATACGGCAAGCTGGTTGGTGATATTCTACCTAGCTGGCTGTCTGGCGCCTTTGCAGCTGTGATG
GCAGGCGCAGTTTTAAGCTCATTTAACTCTTGCCTGAACTCAGCTGCAGCGCTTTATACCTGCGACATCCATCAAAACTA
TATCAATCCGAATGCTGATATTCGAAAAATTGGCACCCGAGTAGCCTTAGTCTTTACCCTTATTTCATTGTGCTTAGTGC
CGGTATTTGCCCAATCGTCTAGTATCATCTCGCTGCTACAGCAGCTAAATGGTCTCTACTCTATGCCAGTACTCGCAGCC
TTTATCTGCGCCCTAGTCTTTAAGGATGTTAACGCTAAAGCGATTAAGATTGGCCTAGTGTTTGGCGTGCTAATGTATGC
GGTGTTTACCTTCGTATGGAGTCCGCTGCACTTTATCCACATGATGGCTATTACCTTGGCCGCCACCATATTTGTCACCC
TCGCCCTGAGTAAATATGTATTCGGGCCACAGAGCATCAATAACCAACTCGTTAGCGACTAA

Upstream 100 bases:

>100_bases
AATGCTGCCTATAAATGGCAATATCTGCCGGCATCATAGCCATCGAGCAGATATGGCCGAACCAAGGATATAGAACTAAA
AATAACGGTTAAGGATCAAC

Downstream 100 bases:

>100_bases
CCGCAAACTACTGCTCCAGTGCCCTATATCGGGTATTGGAGCTGGTATCAAGCTGTGATAGAAAAACTCAGTTACACAAG
TTACAAAGTCATGATATAAA

Product: SSS family solute/sodium (Na+) symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MEHTIQLVIFFGLTALVGLITYLKCRKVTRDSSDSKDYFLAGGGLSWVVVAGSLMMTNISAEQIVGMNGAQTLLVAWWEI
AAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRAMVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTMLA
IIFAVVGAIYAIFGGLRAIAISDSLNGIGLLLMGIVVSYLALNAVNWDLSGIPIERVTLIGDTQSDIPWHTLLTGMIFIQ
IFYWGTNMVITQRALAAKSVEEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAYGKLVGDILPSWLSGAFAAVM
AGAVLSSFNSCLNSAAALYTCDIHQNYINPNADIRKIGTRVALVFTLISLCLVPVFAQSSSIISLLQQLNGLYSMPVLAA
FICALVFKDVNAKAIKIGLVFGVLMYAVFTFVWSPLHFIHMMAITLAATIFVTLALSKYVFGPQSINNQLVSD

Sequences:

>Translated_473_residues
MEHTIQLVIFFGLTALVGLITYLKCRKVTRDSSDSKDYFLAGGGLSWVVVAGSLMMTNISAEQIVGMNGAQTLLVAWWEI
AAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRAMVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTMLA
IIFAVVGAIYAIFGGLRAIAISDSLNGIGLLLMGIVVSYLALNAVNWDLSGIPIERVTLIGDTQSDIPWHTLLTGMIFIQ
IFYWGTNMVITQRALAAKSVEEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAYGKLVGDILPSWLSGAFAAVM
AGAVLSSFNSCLNSAAALYTCDIHQNYINPNADIRKIGTRVALVFTLISLCLVPVFAQSSSIISLLQQLNGLYSMPVLAA
FICALVFKDVNAKAIKIGLVFGVLMYAVFTFVWSPLHFIHMMAITLAATIFVTLALSKYVFGPQSINNQLVSD
>Mature_473_residues
MEHTIQLVIFFGLTALVGLITYLKCRKVTRDSSDSKDYFLAGGGLSWVVVAGSLMMTNISAEQIVGMNGAQTLLVAWWEI
AAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRAMVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTMLA
IIFAVVGAIYAIFGGLRAIAISDSLNGIGLLLMGIVVSYLALNAVNWDLSGIPIERVTLIGDTQSDIPWHTLLTGMIFIQ
IFYWGTNMVITQRALAAKSVEEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAYGKLVGDILPSWLSGAFAAVM
AGAVLSSFNSCLNSAAALYTCDIHQNYINPNADIRKIGTRVALVFTLISLCLVPVFAQSSSIISLLQQLNGLYSMPVLAA
FICALVFKDVNAKAIKIGLVFGVLMYAVFTFVWSPLHFIHMMAITLAATIFVTLALSKYVFGPQSINNQLVSD

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI17941285, Length=455, Percent_Identity=28.7912087912088, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI110835708, Length=456, Percent_Identity=26.9736842105263, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI14140236, Length=472, Percent_Identity=25.635593220339, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI206597483, Length=434, Percent_Identity=26.9585253456221, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI4507031, Length=462, Percent_Identity=26.4069264069264, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI4507033, Length=433, Percent_Identity=26.5588914549654, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI206597487, Length=459, Percent_Identity=25.7080610021786, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI109659836, Length=529, Percent_Identity=24.1965973534972, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI109659839, Length=545, Percent_Identity=23.8532110091743, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI256985183, Length=434, Percent_Identity=24.4239631336406, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI167466278, Length=348, Percent_Identity=25.8620689655172, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI157671931, Length=425, Percent_Identity=22.1176470588235, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1790113, Length=480, Percent_Identity=35.8333333333333, Blast_Score=285, Evalue=3e-78,
Organism=Drosophila melanogaster, GI24645928, Length=428, Percent_Identity=25.4672897196262, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28573698, Length=443, Percent_Identity=21.8961625282167, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24651739, Length=424, Percent_Identity=22.4056603773585, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221459588, Length=429, Percent_Identity=24.2424242424242, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574994, Length=441, Percent_Identity=24.7165532879819, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221459584, Length=426, Percent_Identity=21.830985915493, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221459586, Length=427, Percent_Identity=24.3559718969555, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650192, Length=473, Percent_Identity=21.7758985200846, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 51325; Mature: 51325

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHTIQLVIFFGLTALVGLITYLKCRKVTRDSSDSKDYFLAGGGLSWVVVAGSLMMTNIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCC
AEQIVGMNGAQTLLVAWWEIAAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHH
MVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTMLAIIFAVVGAIYAIFGGLRAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHEEE
ISDSLNGIGLLLMGIVVSYLALNAVNWDLSGIPIERVTLIGDTQSDIPWHTLLTGMIFIQ
ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHH
IFYWGTNMVITQRALAAKSVEEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GKLVGDILPSWLSGAFAAVMAGAVLSSFNSCLNSAAALYTCDIHQNYINPNADIRKIGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECHHCCCCCCCHHHHHHHH
VALVFTLISLCLVPVFAQSSSIISLLQQLNGLYSMPVLAAFICALVFKDVNAKAIKIGLV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FGVLMYAVFTFVWSPLHFIHMMAITLAATIFVTLALSKYVFGPQSINNQLVSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC
>Mature Secondary Structure
MEHTIQLVIFFGLTALVGLITYLKCRKVTRDSSDSKDYFLAGGGLSWVVVAGSLMMTNIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCC
AEQIVGMNGAQTLLVAWWEIAAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHH
MVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTMLAIIFAVVGAIYAIFGGLRAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHEEE
ISDSLNGIGLLLMGIVVSYLALNAVNWDLSGIPIERVTLIGDTQSDIPWHTLLTGMIFIQ
ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHH
IFYWGTNMVITQRALAAKSVEEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GKLVGDILPSWLSGAFAAVMAGAVLSSFNSCLNSAAALYTCDIHQNYINPNADIRKIGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECHHCCCCCCCHHHHHHHH
VALVFTLISLCLVPVFAQSSSIISLLQQLNGLYSMPVLAAFICALVFKDVNAKAIKIGLV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FGVLMYAVFTFVWSPLHFIHMMAITLAATIFVTLALSKYVFGPQSINNQLVSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]