Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960403

Identifier: 157960403

GI number: 157960403

Start: 703914

End: 704645

Strand: Reverse

Name: 157960403

Synonym: Spea_0574

Alternate gene names: NA

Gene position: 704645-703914 (Counterclockwise)

Preceding gene: 157960405

Following gene: 157960402

Centisome position: 13.62

GC content: 43.44

Gene sequence:

>732_bases
TTGAAGTCTAGATTACTCATACTGTTAACAGTGAGCTTTCCTTCAAGCGCCGAGCAAATCGTAGTGGCTTCTGACATATG
GTGCCCTTACATTTGCAGCGACAATTCTGGTTATGTGGTTGAACTCACACAGCAAGCCTTCGCCACCGTGGATGTTGAGG
TGAAATTTGAAACCATTCCTTTTCAAAGGGCATTAAAACTCACAAGCCAGCATAAGATCGATGCCGTTTTGGCTGTCACT
AGTGAGCACATGCTCAATTTTGAACTTTATAATAATCACATTGTAATTGGTCAATACACCAATGACTTTTATACCGCTGT
AGACTCAAGTTGGCAGTACTCCGACCTAGCAAGCTTAGATGATATGCTGATCGCCACCATCCTAGGCTATGATTACGGCC
AATCATTAAATCAGTATCTAGAAACACGTCATCCCCAGATCCGCACATCGGGAGAGACGCCGCTCAAGAGTAATCTTTAC
CTAACCGCAAAACGTCGCGTAGACCTACTAGTCGGTAATCGATACGTTATCGATCATACTGCAAGGCAATTTGGCTATAG
CGATGATATTCGTTATGCAGGCAGTGAAAATGAGATCACCCCGCTTTACGTGGGATTTGGTAATAATGACAAGGGGCGAA
GTTACGCCACTAAGTTTGCTCAAGGCATTGAAAGCCTCAAACAAAATGGTGAATACCAGGCTATCCTCGACAAATACCAA
ATCACGTTTTAA

Upstream 100 bases:

>100_bases
CAGGATGGAGGAATCAAGAATAATTCTCATTTAAAGACCTTTTTTAAACCCAATTTGATAGACTAGTGCTAGCCTTTCTA
CCGTGATTAATAGGATTATT

Downstream 100 bases:

>100_bases
GCCGCTATCGAGCAATCTGATTTAAATTTTTGGCAAAAAAAAGCTCCCTGAACAGGGAGCTTTTTCTTTATATGTAATGT
CCCGTCCTGAGATAAGTTGA

Product: putative cation efflux protein

Products: NA

Alternate protein names: Amino Acid ABC Transporter; Amino Acid ABC Transporter Periplasmic Protein; ABC-Type Amino Acid Transport/Signal Transduction System

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKSRLLILLTVSFPSSAEQIVVASDIWCPYICSDNSGYVVELTQQAFATVDVEVKFETIPFQRALKLTSQHKIDAVLAVT
SEHMLNFELYNNHIVIGQYTNDFYTAVDSSWQYSDLASLDDMLIATILGYDYGQSLNQYLETRHPQIRTSGETPLKSNLY
LTAKRRVDLLVGNRYVIDHTARQFGYSDDIRYAGSENEITPLYVGFGNNDKGRSYATKFAQGIESLKQNGEYQAILDKYQ
ITF

Sequences:

>Translated_243_residues
MKSRLLILLTVSFPSSAEQIVVASDIWCPYICSDNSGYVVELTQQAFATVDVEVKFETIPFQRALKLTSQHKIDAVLAVT
SEHMLNFELYNNHIVIGQYTNDFYTAVDSSWQYSDLASLDDMLIATILGYDYGQSLNQYLETRHPQIRTSGETPLKSNLY
LTAKRRVDLLVGNRYVIDHTARQFGYSDDIRYAGSENEITPLYVGFGNNDKGRSYATKFAQGIESLKQNGEYQAILDKYQ
ITF
>Mature_243_residues
MKSRLLILLTVSFPSSAEQIVVASDIWCPYICSDNSGYVVELTQQAFATVDVEVKFETIPFQRALKLTSQHKIDAVLAVT
SEHMLNFELYNNHIVIGQYTNDFYTAVDSSWQYSDLASLDDMLIATILGYDYGQSLNQYLETRHPQIRTSGETPLKSNLY
LTAKRRVDLLVGNRYVIDHTARQFGYSDDIRYAGSENEITPLYVGFGNNDKGRSYATKFAQGIESLKQNGEYQAILDKYQ
ITF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27595; Mature: 27595

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRLLILLTVSFPSSAEQIVVASDIWCPYICSDNSGYVVELTQQAFATVDVEVKFETIP
CCCCEEEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEEEECHHEEEEEEEEEEEECC
FQRALKLTSQHKIDAVLAVTSEHMLNFELYNNHIVIGQYTNDFYTAVDSSWQYSDLASLD
HHHHHHHHCCCCCEEEEEEECCCEEEEEEECCEEEEEEECCCEEEECCCCCCCHHHHHHH
DMLIATILGYDYGQSLNQYLETRHPQIRTSGETPLKSNLYLTAKRRVDLLVGNRYVIDHT
HHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECEEEEEECCEEEEECH
ARQFGYSDDIRYAGSENEITPLYVGFGNNDKGRSYATKFAQGIESLKQNGEYQAILDKYQ
HHHCCCCCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE
ITF
ECC
>Mature Secondary Structure
MKSRLLILLTVSFPSSAEQIVVASDIWCPYICSDNSGYVVELTQQAFATVDVEVKFETIP
CCCCEEEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEEEECHHEEEEEEEEEEEECC
FQRALKLTSQHKIDAVLAVTSEHMLNFELYNNHIVIGQYTNDFYTAVDSSWQYSDLASLD
HHHHHHHHCCCCCEEEEEEECCCEEEEEEECCEEEEEEECCCEEEECCCCCCCHHHHHHH
DMLIATILGYDYGQSLNQYLETRHPQIRTSGETPLKSNLYLTAKRRVDLLVGNRYVIDHT
HHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECEEEEEECCEEEEECH
ARQFGYSDDIRYAGSENEITPLYVGFGNNDKGRSYATKFAQGIESLKQNGEYQAILDKYQ
HHHCCCCCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE
ITF
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA