| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is galM [H]
Identifier: 157960405
GI number: 157960405
Start: 705652
End: 706683
Strand: Reverse
Name: galM [H]
Synonym: Spea_0576
Alternate gene names: 157960405
Gene position: 706683-705652 (Counterclockwise)
Preceding gene: 157960406
Following gene: 157960403
Centisome position: 13.66
GC content: 46.8
Gene sequence:
>1032_bases ATGGTACGCATTCGCCCTCTCGAGCCTTGGACCGATCCACGTGGTGGACAAATAGAGCGACTGCTCATCGATAACGGTAC AATAGCGATAGAAGTGTTAAGCCTTGGCGGGATCATCCGCTCTTTATGGGCACCGGATCGAGATGGTGAGCGTGCAAACT TAGTATTAGGCTGTGATAGCGCTGAAGATTATCTAGCCCAAGATGCCTACTTGGGCGCCATTGCTGGACGATACGCCAAC CGTATTGCCAAGGGCCGTTTTAGTGTTGGTCAAACTCAGTACCAGCTCGATGTTAACCAGGCGATGAATTGTTTACATGG TGGCAGTGAAGGGTTCCATCGAAAAAATTGGCAACTAGGGCCACTACCCGATGGTGTGCGTCTCAGTCTAAAAAGCTTAG ATCAAGACATGGGCTTTCCCGGTAACTGTAACGTGCAGTTAGATTATCGTCTAGTCGGCAATAATCTCTATGTAGAGATC TTAGCAAGCTCAGATAAACCTTGCCCGATTAGCCTGACTCAACACAGTTATTTTAATCTAGACTCCAGCAAGACAAGCCT CAACCACCAACTGCAGATCGATGCAAAACAATACCTCAGCATAGATGATAGCGGGATCCCCAAGTCTGTTTGTTCAACCA AGAGCAGTGACTTAGATCTTTCTATGCCGACAGAGTTACAGTCACTCATTGGGCGTGAAGAATTAACCGCAACCTCGGGA ATCGATCATTGTTTCTTAATGCCTAACACAGAGTCAAAACTACAGCGATTTGGTCGTTTGAGCTCACCACTTAGCGGTCG TAGCATGACTTTATATACCAATCAGCCAAGCGTGCAGGTATATGGAGGTAATGGCTTAGAAGGGGTAATAGGTAAAAGCC AACAGGGATTAGGTCAATATCAGGGGGTGTGTTTAGAACCTCAACAGATCCCAGATGCGCCAAACCAGGCTCATATAGCT GGAGATGCGATGATTAATCCTGGCGAGGTTTACCATCATATCAGTCGCTATCAATTTGAAGTGGACGCCTAA
Upstream 100 bases:
>100_bases AGGCCTAGAAGCCGATATTTATCTCTGTACAGCTAGCGATGGTGCCAAGCGTATCGACGATTAGCTTAACGATTGATGTA ACAATTAACAGGACTTAATT
Downstream 100 bases:
>100_bases TACCAATTGGTATAGAACAAATAACAGCGCCTAGGCGCTGTTATTTAACTCTTATTGATTAATCATCGTAATCGTCTGAC CAATCATCATCATAGTCATC
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MVRIRPLEPWTDPRGGQIERLLIDNGTIAIEVLSLGGIIRSLWAPDRDGERANLVLGCDSAEDYLAQDAYLGAIAGRYAN RIAKGRFSVGQTQYQLDVNQAMNCLHGGSEGFHRKNWQLGPLPDGVRLSLKSLDQDMGFPGNCNVQLDYRLVGNNLYVEI LASSDKPCPISLTQHSYFNLDSSKTSLNHQLQIDAKQYLSIDDSGIPKSVCSTKSSDLDLSMPTELQSLIGREELTATSG IDHCFLMPNTESKLQRFGRLSSPLSGRSMTLYTNQPSVQVYGGNGLEGVIGKSQQGLGQYQGVCLEPQQIPDAPNQAHIA GDAMINPGEVYHHISRYQFEVDA
Sequences:
>Translated_343_residues MVRIRPLEPWTDPRGGQIERLLIDNGTIAIEVLSLGGIIRSLWAPDRDGERANLVLGCDSAEDYLAQDAYLGAIAGRYAN RIAKGRFSVGQTQYQLDVNQAMNCLHGGSEGFHRKNWQLGPLPDGVRLSLKSLDQDMGFPGNCNVQLDYRLVGNNLYVEI LASSDKPCPISLTQHSYFNLDSSKTSLNHQLQIDAKQYLSIDDSGIPKSVCSTKSSDLDLSMPTELQSLIGREELTATSG IDHCFLMPNTESKLQRFGRLSSPLSGRSMTLYTNQPSVQVYGGNGLEGVIGKSQQGLGQYQGVCLEPQQIPDAPNQAHIA GDAMINPGEVYHHISRYQFEVDA >Mature_343_residues MVRIRPLEPWTDPRGGQIERLLIDNGTIAIEVLSLGGIIRSLWAPDRDGERANLVLGCDSAEDYLAQDAYLGAIAGRYAN RIAKGRFSVGQTQYQLDVNQAMNCLHGGSEGFHRKNWQLGPLPDGVRLSLKSLDQDMGFPGNCNVQLDYRLVGNNLYVEI LASSDKPCPISLTQHSYFNLDSSKTSLNHQLQIDAKQYLSIDDSGIPKSVCSTKSSDLDLSMPTELQSLIGREELTATSG IDHCFLMPNTESKLQRFGRLSSPLSGRSMTLYTNQPSVQVYGGNGLEGVIGKSQQGLGQYQGVCLEPQQIPDAPNQAHIA GDAMINPGEVYHHISRYQFEVDA
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=331, Percent_Identity=36.5558912386707, Blast_Score=208, Evalue=7e-54, Organism=Escherichia coli, GI1786971, Length=332, Percent_Identity=35.2409638554217, Blast_Score=196, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17557428, Length=321, Percent_Identity=28.9719626168224, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI115533334, Length=321, Percent_Identity=28.9719626168224, Blast_Score=133, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6319493, Length=311, Percent_Identity=28.6173633440514, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6322004, Length=355, Percent_Identity=27.6056338028169, Blast_Score=93, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6324399, Length=311, Percent_Identity=26.3665594855305, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI24659048, Length=353, Percent_Identity=30.5949008498584, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24668278, Length=337, Percent_Identity=28.486646884273, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24583720, Length=345, Percent_Identity=27.8260869565217, Blast_Score=141, Evalue=7e-34, Organism=Drosophila melanogaster, GI24668282, Length=355, Percent_Identity=27.3239436619718, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24641876, Length=339, Percent_Identity=27.1386430678466, Blast_Score=125, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR013458 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 37613; Mature: 37613
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRIRPLEPWTDPRGGQIERLLIDNGTIAIEVLSLGGIIRSLWAPDRDGERANLVLGCDS CEEEECCCCCCCCCCCCEEEEEEECCEEEEEEEHHHHHHHHHCCCCCCCCCEEEEEECCC AEDYLAQDAYLGAIAGRYANRIAKGRFSVGQTQYQLDVNQAMNCLHGGSEGFHRKNWQLG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCC PLPDGVRLSLKSLDQDMGFPGNCNVQLDYRLVGNNLYVEILASSDKPCPISLTQHSYFNL CCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCEEEC DSSKTSLNHQLQIDAKQYLSIDDSGIPKSVCSTKSSDLDLSMPTELQSLIGREELTATSG CCCCCCCCEEEEECHHHHEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCHHHHHHHCC IDHCFLMPNTESKLQRFGRLSSPLSGRSMTLYTNQPSVQVYGGNGLEGVIGKSQQGLGQY CCEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHH QGVCLEPQQIPDAPNQAHIAGDAMINPGEVYHHISRYQFEVDA CCEEECHHHCCCCCCCCEEECCCEECHHHHHHHHHHEEEEECC >Mature Secondary Structure MVRIRPLEPWTDPRGGQIERLLIDNGTIAIEVLSLGGIIRSLWAPDRDGERANLVLGCDS CEEEECCCCCCCCCCCCEEEEEEECCEEEEEEEHHHHHHHHHCCCCCCCCCEEEEEECCC AEDYLAQDAYLGAIAGRYANRIAKGRFSVGQTQYQLDVNQAMNCLHGGSEGFHRKNWQLG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCC PLPDGVRLSLKSLDQDMGFPGNCNVQLDYRLVGNNLYVEILASSDKPCPISLTQHSYFNL CCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCEEEC DSSKTSLNHQLQIDAKQYLSIDDSGIPKSVCSTKSSDLDLSMPTELQSLIGREELTATSG CCCCCCCCEEEEECHHHHEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCHHHHHHHCC IDHCFLMPNTESKLQRFGRLSSPLSGRSMTLYTNQPSVQVYGGNGLEGVIGKSQQGLGQY CCEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHH QGVCLEPQQIPDAPNQAHIAGDAMINPGEVYHHISRYQFEVDA CCEEECHHHCCCCCCCCEEECCCEECHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7966338; 8905232; 9278503 [H]