| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is metJ [H]
Identifier: 157960388
GI number: 157960388
Start: 686241
End: 686555
Strand: Reverse
Name: metJ [H]
Synonym: Spea_0559
Alternate gene names: 157960388
Gene position: 686555-686241 (Counterclockwise)
Preceding gene: 157960395
Following gene: 157960387
Centisome position: 13.27
GC content: 44.13
Gene sequence:
>315_bases ATGACTGAGTGGAATGGCGATTATATCAGCCCATATGCTGAACACGGCAAAAAGAATGAGCAAGTGAAAAAAATTACTGT GTCCATTCCTTTGAAAGTACTCAAAGTACTTACCGATGAACGCACACGCCGCCAAGTGAACAACTTGCGTCACGCCACCA ATAGTGAACTGTTATGCGAGGCATTCTTGCATGCGTACACAGGTCAGCCACTACCAAACGACGCAGATCTTACTAAAGAT AAACCTGACAGCATGCCTGCTGAGGTTAAACGTCTAATGGATGAAATGGGCATTGAGTGGGAAGAACTTGAATAA
Upstream 100 bases:
>100_bases GGAAATCTATTTGCAATTGTCATAAATAAGAGGCAATAATTTGACTGCACAATTTAAAGGGTTAAAATCTGCCCCGAATT TTGAAATAACAGGTGAGTCA
Downstream 100 bases:
>100_bases TCTTCATCGATTATCGACAAACGTGATCTTCAGATAAGGACTGCTTAGCAGTCCTTATCTGTTTTTGGCCTTGAATGATG GCTTAGCTCTATTAATCTAT
Product: transcriptional repressor protein MetJ
Products: NA
Alternate protein names: Met regulon regulatory protein metJ [H]
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPNDADLTKD KPDSMPAEVKRLMDEMGIEWEELE
Sequences:
>Translated_104_residues MTEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPNDADLTKD KPDSMPAEVKRLMDEMGIEWEELE >Mature_103_residues TEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPNDADLTKDK PDSMPAEVKRLMDEMGIEWEELE
Specific function: This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis [H]
COG id: COG3060
COG function: function code KE; Transcriptional regulator of met regulon
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metJ family [H]
Homologues:
Organism=Escherichia coli, GI1790373, Length=98, Percent_Identity=80.6122448979592, Blast_Score=172, Evalue=4e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002084 - InterPro: IPR010985 - ProDom: PD020365 [H]
Pfam domain/function: PF01340 MetJ [H]
EC number: NA
Molecular weight: Translated: 12011; Mature: 11880
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCE CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHH AFLHAYTGQPLPNDADLTKDKPDSMPAEVKRLMDEMGIEWEELE HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCE CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHH AFLHAYTGQPLPNDADLTKDKPDSMPAEVKRLMDEMGIEWEELE HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]