| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960387
Identifier: 157960387
GI number: 157960387
Start: 685317
End: 686048
Strand: Reverse
Name: 157960387
Synonym: Spea_0558
Alternate gene names: NA
Gene position: 686048-685317 (Counterclockwise)
Preceding gene: 157960388
Following gene: 157960384
Centisome position: 13.26
GC content: 47.27
Gene sequence:
>732_bases ATGATTGAACCCGTTACGCTTTTACTCGCCTCGCTTATTATTTTTTGTGGCGCACTGACCCAAAGTCTTATCGGCTTTGG CCTAGCCGTGGTGGCAAGTCCCTTACTCTATATCGTCGACCCGAGTTTGGTTCCTGCACCTGTAATTATGATGGGCTTCT CAATTGCACTGCTCACCTTGTTTAGAGAACGTGGCCAACTTGAATTCAATGGTCTGCAATACGCGCTATTAGGACGCATT CCCGGAGGCATATTAGGTGCCAGCCTAATTTTAATCGCGCCACAGCCAATCTTAGGTCTAGCCATTGCCGGTATTGTTGC TTTAGCCGTCGGTTTAAGTCTAATGAAGTTCAGTATTCCAGTGAACCGTTTCAGCCTCTTTATCGCAGGGATCTTATCTG GAATTTTTGGCAATATCGCGGCAATTGGCGGCCCGCCGCTGGCAATCTTACTATCAGGCAAAGATGCCGGACAATTTCGC GCCGCCCTCTCGGCCTTCTTCATCTTTAGCTCGATGATTGCCCTTATCATTCTGGCATTTGCAGGCCTACTAACCGTTGA GCATTTTTATATCTCGTTGATGCTGTTGCCGTCTGTTGTGCTGGGTTATATCGTTGCAGGACGCTTAGTGGGCCGTGTAG ACAAACAAAAAACCAGAGTGTTAACTCTGGCTTTATGTGGTTGTAGCGCTCTTATCCTAACCGTTAAATCAACGATAGAG CTAATGGGTTAG
Upstream 100 bases:
>100_bases TAATCTATAACCACTAATCGATAACCAAAATACTGAACTGTTCAAACAGAGTGCAAGACCTCCCTTCGCTCCAACTATAG CCACTTGGCTGGATAAACTG
Downstream 100 bases:
>100_bases CACTGGTTAGAAATGGTAGGAGGTTTGCAGCACGCCTCCTACCGCATTGTCATCACCAAACATACCAGTAAGGTCTAAGA AAAATGAGTCACCAAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIEPVTLLLASLIIFCGALTQSLIGFGLAVVASPLLYIVDPSLVPAPVIMMGFSIALLTLFRERGQLEFNGLQYALLGRI PGGILGASLILIAPQPILGLAIAGIVALAVGLSLMKFSIPVNRFSLFIAGILSGIFGNIAAIGGPPLAILLSGKDAGQFR AALSAFFIFSSMIALIILAFAGLLTVEHFYISLMLLPSVVLGYIVAGRLVGRVDKQKTRVLTLALCGCSALILTVKSTIE LMG
Sequences:
>Translated_243_residues MIEPVTLLLASLIIFCGALTQSLIGFGLAVVASPLLYIVDPSLVPAPVIMMGFSIALLTLFRERGQLEFNGLQYALLGRI PGGILGASLILIAPQPILGLAIAGIVALAVGLSLMKFSIPVNRFSLFIAGILSGIFGNIAAIGGPPLAILLSGKDAGQFR AALSAFFIFSSMIALIILAFAGLLTVEHFYISLMLLPSVVLGYIVAGRLVGRVDKQKTRVLTLALCGCSALILTVKSTIE LMG >Mature_243_residues MIEPVTLLLASLIIFCGALTQSLIGFGLAVVASPLLYIVDPSLVPAPVIMMGFSIALLTLFRERGQLEFNGLQYALLGRI PGGILGASLILIAPQPILGLAIAGIVALAVGLSLMKFSIPVNRFSLFIAGILSGIFGNIAAIGGPPLAILLSGKDAGQFR AALSAFFIFSSMIALIILAFAGLLTVEHFYISLMLLPSVVLGYIVAGRLVGRVDKQKTRVLTLALCGCSALILTVKSTIE LMG
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25352; Mature: 25352
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEPVTLLLASLIIFCGALTQSLIGFGLAVVASPLLYIVDPSLVPAPVIMMGFSIALLTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHH FRERGQLEFNGLQYALLGRIPGGILGASLILIAPQPILGLAIAGIVALAVGLSLMKFSIP HHHCCCCEECCHHHEEHHCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCC VNRFSLFIAGILSGIFGNIAAIGGPPLAILLSGKDAGQFRAALSAFFIFSSMIALIILAF HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH AGLLTVEHFYISLMLLPSVVLGYIVAGRLVGRVDKQKTRVLTLALCGCSALILTVKSTIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMG HCC >Mature Secondary Structure MIEPVTLLLASLIIFCGALTQSLIGFGLAVVASPLLYIVDPSLVPAPVIMMGFSIALLTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHH FRERGQLEFNGLQYALLGRIPGGILGASLILIAPQPILGLAIAGIVALAVGLSLMKFSIP HHHCCCCEECCHHHEEHHCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCC VNRFSLFIAGILSGIFGNIAAIGGPPLAILLSGKDAGQFRAALSAFFIFSSMIALIILAF HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH AGLLTVEHFYISLMLLPSVVLGYIVAGRLVGRVDKQKTRVLTLALCGCSALILTVKSTIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMG HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA