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The map label for this gene is 157960386

Identifier: 157960386

GI number: 157960386

Start: 684117

End: 685310

Strand: Direct

Name: 157960386

Synonym: Spea_0557

Alternate gene names: NA

Gene position: 684117-685310 (Clockwise)

Preceding gene: 157960385

Following gene: 157960389

Centisome position: 13.22

GC content: 46.9

Gene sequence:

>1194_bases
ATGAAACTAGATAAAATTGCATTGGCATGCGCCATAGTCCCCTGTTTTACAGCCCAAGCAGGGCAAGAATATTATGAGGC
ACGCAGTGATGCGATGGGAGGGGCGGGAGTAGCCGCTTCAAATAGAGAAGGCGCGGCATTTGTTAATCCCGCCCTACTTG
CGATTAATGCCCATAAAGACAACTCCGCCGTGTTACTGATCCCCGCGATAGGGGCCGATGTGGCCGATAGTGATGACATG
ATCGATAAGTTCGATTCACTGATCGATTCTTATGACGCGCTCGAGGCCGCAATCGATGTTGGCAATACCGCTGCTATTGA
CGAGTTTCGTGATGATCTCGTTTTCGACTTAGAGTCACTAAATGGCAATTCAGCCTATGCCAGTGCGGGGCTTGGTTTTA
GTGTGGCGATCCCCTACCAGAGGATGCCGATGGCTATCTTCTATAAGAGTTATGTTAACGCCGTTGGAGTTGCCGATATT
GCGCAATCAGATATCGACGCCCTCAATAATCTCGATCCTAATAACCCTCCAAATATCAGTGATCTGGACTCCCAAGGGCA
AGTGGTTGGTGGCGCGGTATCTGATTTCGGTATTGCACTAAGTTTTCCGCTGTCTATCGTAAACATGCCGATAGCAGTGG
GAATTTCGCCTAAGTTTCAGCGTATCGACAGCTACAACTATATCGCCAATGCTAACAACTTTGATGCCAGTGATTTTGAC
GATGCCAAATATCGCAATGATGAGACTAACTTTAACTTAGATATTGGTGTCGCCATGCAAGCATTCGATGGTTTGACCTT
AGGCCTGTCGGGGCGAAACCTGATCAGCCAAGATGTGGATACCATAGAAGTTGAAGGGCAGAAGTTTACTTATCGAGTCG
AGCCACTTGTGACCGCTGCTGTGGCCTATGATTGGGATATTTTATCGGTGACCACAGATATCGATCTAATTGAGAATAAG
AAGTTTAAAGAGCTGGATGGTACTCAATATTGGCGTGTAGGTGGTGAAGTGAGGGCCTTCGACTGGATGGCGCTAAGAGT
GGGTTATCGTCATGACATGAAAGATTCTACTGCTAACCTTTACTCTTTGGGTTCAGGCTTTGCTTTTGGTGACTCATTTT
TCTTAGACCTTACTGGTATGTTTGGTGATGACAATGCGGTAGGAGGCGTGCTGCAAACCTCCTACCATTTCTAA

Upstream 100 bases:

>100_bases
TTCAATTTTGTCTTAGAATATCTTAAGAACAAAATTACCTTTTATCGGTTTGAGTCGTATCGTGACTTAAAGTGCTAAGG
ACATTAAAAGGGCTGAATGG

Downstream 100 bases:

>100_bases
CCAGTGCTAACCCATTAGCTCTATCGTTGATTTAACGGTTAGGATAAGAGCGCTACAACCACATAAAGCCAGAGTTAACA
CTCTGGTTTTTTGTTTGTCT

Product: putative plasmid transfer protein

Products: NA

Alternate protein names: Plasmid Transfer Protein TraF; TraF Protein; Outer Membrane Or Exported; Conjugative Transfer Protein; TraF-Related Protein; Ribonuclease PH; IncI1 Plasmid Conjugative Transfer Protein TraF

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKLDKIALACAIVPCFTAQAGQEYYEARSDAMGGAGVAASNREGAAFVNPALLAINAHKDNSAVLLIPAIGADVADSDDM
IDKFDSLIDSYDALEAAIDVGNTAAIDEFRDDLVFDLESLNGNSAYASAGLGFSVAIPYQRMPMAIFYKSYVNAVGVADI
AQSDIDALNNLDPNNPPNISDLDSQGQVVGGAVSDFGIALSFPLSIVNMPIAVGISPKFQRIDSYNYIANANNFDASDFD
DAKYRNDETNFNLDIGVAMQAFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAAVAYDWDILSVTTDIDLIENK
KFKELDGTQYWRVGGEVRAFDWMALRVGYRHDMKDSTANLYSLGSGFAFGDSFFLDLTGMFGDDNAVGGVLQTSYHF

Sequences:

>Translated_397_residues
MKLDKIALACAIVPCFTAQAGQEYYEARSDAMGGAGVAASNREGAAFVNPALLAINAHKDNSAVLLIPAIGADVADSDDM
IDKFDSLIDSYDALEAAIDVGNTAAIDEFRDDLVFDLESLNGNSAYASAGLGFSVAIPYQRMPMAIFYKSYVNAVGVADI
AQSDIDALNNLDPNNPPNISDLDSQGQVVGGAVSDFGIALSFPLSIVNMPIAVGISPKFQRIDSYNYIANANNFDASDFD
DAKYRNDETNFNLDIGVAMQAFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAAVAYDWDILSVTTDIDLIENK
KFKELDGTQYWRVGGEVRAFDWMALRVGYRHDMKDSTANLYSLGSGFAFGDSFFLDLTGMFGDDNAVGGVLQTSYHF
>Mature_397_residues
MKLDKIALACAIVPCFTAQAGQEYYEARSDAMGGAGVAASNREGAAFVNPALLAINAHKDNSAVLLIPAIGADVADSDDM
IDKFDSLIDSYDALEAAIDVGNTAAIDEFRDDLVFDLESLNGNSAYASAGLGFSVAIPYQRMPMAIFYKSYVNAVGVADI
AQSDIDALNNLDPNNPPNISDLDSQGQVVGGAVSDFGIALSFPLSIVNMPIAVGISPKFQRIDSYNYIANANNFDASDFD
DAKYRNDETNFNLDIGVAMQAFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAAVAYDWDILSVTTDIDLIENK
KFKELDGTQYWRVGGEVRAFDWMALRVGYRHDMKDSTANLYSLGSGFAFGDSFFLDLTGMFGDDNAVGGVLQTSYHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42799; Mature: 42799

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDKIALACAIVPCFTAQAGQEYYEARSDAMGGAGVAASNREGAAFVNPALLAINAHKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCEEEEEECCCC
NSAVLLIPAIGADVADSDDMIDKFDSLIDSYDALEAAIDVGNTAAIDEFRDDLVFDLESL
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEHHHC
NGNSAYASAGLGFSVAIPYQRMPMAIFYKSYVNAVGVADIAQSDIDALNNLDPNNPPNIS
CCCCCEEECCCCEEEECCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
DLDSQGQVVGGAVSDFGIALSFPLSIVNMPIAVGISPKFQRIDSYNYIANANNFDASDFD
CCCCCCCEEECCHHHCCEEEECCHHHHCCCEEECCCHHHHHCCCCCEEECCCCCCCCCCC
DAKYRNDETNFNLDIGVAMQAFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAA
CCCCCCCCCCEEEEEEEEEHHCCCEEEECCCCCHHHCCCCEEEECCCEEEEEECHHEEEE
VAYDWDILSVTTDIDLIENKKFKELDGTQYWRVGGEVRAFDWMALRVGYRHDMKDSTANL
EEECCEEEEEEECCCHHCCCCCCCCCCCEEEEECCEEEEEEEEEEEECCCCCCCCCCCHH
YSLGSGFAFGDSFFLDLTGMFGDDNAVGGVLQTSYHF
HCCCCCCCCCCEEEEEEEECCCCCCCCCCEECCCCCC
>Mature Secondary Structure
MKLDKIALACAIVPCFTAQAGQEYYEARSDAMGGAGVAASNREGAAFVNPALLAINAHKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCEEEEEECCCC
NSAVLLIPAIGADVADSDDMIDKFDSLIDSYDALEAAIDVGNTAAIDEFRDDLVFDLESL
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEHHHC
NGNSAYASAGLGFSVAIPYQRMPMAIFYKSYVNAVGVADIAQSDIDALNNLDPNNPPNIS
CCCCCEEECCCCEEEECCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
DLDSQGQVVGGAVSDFGIALSFPLSIVNMPIAVGISPKFQRIDSYNYIANANNFDASDFD
CCCCCCCEEECCHHHCCEEEECCHHHHCCCEEECCCHHHHHCCCCCEEECCCCCCCCCCC
DAKYRNDETNFNLDIGVAMQAFDGLTLGLSGRNLISQDVDTIEVEGQKFTYRVEPLVTAA
CCCCCCCCCCEEEEEEEEEHHCCCEEEECCCCCHHHCCCCEEEECCCEEEEEECHHEEEE
VAYDWDILSVTTDIDLIENKKFKELDGTQYWRVGGEVRAFDWMALRVGYRHDMKDSTANL
EEECCEEEEEEECCCHHCCCCCCCCCCCEEEEECCEEEEEEEEEEEECCCCCCCCCCCHH
YSLGSGFAFGDSFFLDLTGMFGDDNAVGGVLQTSYHF
HCCCCCCCCCCEEEEEEEECCCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA