| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960376
Identifier: 157960376
GI number: 157960376
Start: 672400
End: 673461
Strand: Direct
Name: 157960376
Synonym: Spea_0547
Alternate gene names: NA
Gene position: 672400-673461 (Clockwise)
Preceding gene: 157960372
Following gene: 157960377
Centisome position: 12.99
GC content: 47.08
Gene sequence:
>1062_bases ATGAGTGTGTCTCCATTACGGTTTATCGCAGGCCCCAAAGCCTTTAAAACGCTCAGTGAAAATGACTTTAAACCAGAGCT GTTTACCCAGCTGTTGGCCGCATCGGGTGGGCCTAAGTGGATAGGTATCGCAGCACTAGATCGTTATTTGTTTAGCGAGT TTTTTAAAGACTTAAATCAGCCGTTACATACTTTAGGGGCTTCATCTGGGGCGTGGAGATTAGCGTGTTTAGCGCAGGCA AATCCAAGTGCGGCTTATGACCGATTAGAGCAGCTGTATATCGGTCAGCGCTATGATACTAAGCCTACAGCGGTAGAAGT ATCAAAACAGGTGGCCGGGATTATTCAAGGCTTGCTAGGCAGTACAGGCGCTATGGAGATTATTAGTCATTCGCAGATCA ATAGCCATTATATCGCCTGTCAGGCTAGGCATATTAATCGCCTCGGCGGGCACGCGCCGTTGGCTCTGGGTTTAGCGGCT GCAGCAATGACAAATTTAGTCACACGTAAGAGTCTAGCTTGGCATTTTAAGCGTTGTGTTTTTGGCGTTGAGCAAGGTGT TTCCCCCTATGCAGAGCTTAAGGATCTACCCAGTGAGTTTTACGCTCTCTCGCAAAACAATATTCATCAAGTCTTATTAG CAACGGGCTCAATCCCCTGGGTGTTAGCGCCAGTGAAGACCATTGATGGCGCGCCAAAAGGCCATTACTACGATGGTGGG ATCACCGACTACCACTTTGACTTACCACTTAAGCAAAGCCAAGGCTTGACCTTGTACCCGCATTTTTACCCAAAGATGGC ACCGGGCTGGTTCGATAAATCGCTACCTTGGCGTTTGGCTAAGGCTAACTATGATAATGCTCTTATCTTAGCCCCCAGTG ATGCTTACCTGCAGAGTCTGCCCTACGGCAAGCTACCCGATAGAGGGGACTTTAAACATTTAGATAGTGACAGCAGGATT AAATATTGGCAAAAGTCGGCATCGATGAGTAAGAAATTAGCCGATGATTTAGCTGAAGTTATTGATAAAGGCCTACTGGC TGAACGTTTAGAACGGCTATAG
Upstream 100 bases:
>100_bases CCTGTTTGAGCTTGTTGCGTCCATGAAGTTGCATCCATGAAGTTGCAGGTTTACTGTATGGCGTGTGCAGAATGAAAGCT GAAATAATTCAATATTAAGG
Downstream 100 bases:
>100_bases TTTCTGCAATAAATCGCACTATGTTGCTGTCTAATTAGTGAGTACCTAGTCATTTGTGCTCGCTGGCTGAAATTTGTGCA GATGCTACACTTTAGCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSVSPLRFIAGPKAFKTLSENDFKPELFTQLLAASGGPKWIGIAALDRYLFSEFFKDLNQPLHTLGASSGAWRLACLAQA NPSAAYDRLEQLYIGQRYDTKPTAVEVSKQVAGIIQGLLGSTGAMEIISHSQINSHYIACQARHINRLGGHAPLALGLAA AAMTNLVTRKSLAWHFKRCVFGVEQGVSPYAELKDLPSEFYALSQNNIHQVLLATGSIPWVLAPVKTIDGAPKGHYYDGG ITDYHFDLPLKQSQGLTLYPHFYPKMAPGWFDKSLPWRLAKANYDNALILAPSDAYLQSLPYGKLPDRGDFKHLDSDSRI KYWQKSASMSKKLADDLAEVIDKGLLAERLERL
Sequences:
>Translated_353_residues MSVSPLRFIAGPKAFKTLSENDFKPELFTQLLAASGGPKWIGIAALDRYLFSEFFKDLNQPLHTLGASSGAWRLACLAQA NPSAAYDRLEQLYIGQRYDTKPTAVEVSKQVAGIIQGLLGSTGAMEIISHSQINSHYIACQARHINRLGGHAPLALGLAA AAMTNLVTRKSLAWHFKRCVFGVEQGVSPYAELKDLPSEFYALSQNNIHQVLLATGSIPWVLAPVKTIDGAPKGHYYDGG ITDYHFDLPLKQSQGLTLYPHFYPKMAPGWFDKSLPWRLAKANYDNALILAPSDAYLQSLPYGKLPDRGDFKHLDSDSRI KYWQKSASMSKKLADDLAEVIDKGLLAERLERL >Mature_352_residues SVSPLRFIAGPKAFKTLSENDFKPELFTQLLAASGGPKWIGIAALDRYLFSEFFKDLNQPLHTLGASSGAWRLACLAQAN PSAAYDRLEQLYIGQRYDTKPTAVEVSKQVAGIIQGLLGSTGAMEIISHSQINSHYIACQARHINRLGGHAPLALGLAAA AMTNLVTRKSLAWHFKRCVFGVEQGVSPYAELKDLPSEFYALSQNNIHQVLLATGSIPWVLAPVKTIDGAPKGHYYDGGI TDYHFDLPLKQSQGLTLYPHFYPKMAPGWFDKSLPWRLAKANYDNALILAPSDAYLQSLPYGKLPDRGDFKHLDSDSRIK YWQKSASMSKKLADDLAEVIDKGLLAERLERL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39006; Mature: 38875
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSPLRFIAGPKAFKTLSENDFKPELFTQLLAASGGPKWIGIAALDRYLFSEFFKDLNQ CCCCCCHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH PLHTLGASSGAWRLACLAQANPSAAYDRLEQLYIGQRYDTKPTAVEVSKQVAGIIQGLLG HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC STGAMEIISHSQINSHYIACQARHINRLGGHAPLALGLAAAAMTNLVTRKSLAWHFKRCV CCCHHHHHHHHCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVEQGVSPYAELKDLPSEFYALSQNNIHQVLLATGSIPWVLAPVKTIDGAPKGHYYDGG HHHHHCCCHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCEEEECHHHCCCCCCCCCCCCC ITDYHFDLPLKQSQGLTLYPHFYPKMAPGWFDKSLPWRLAKANYDNALILAPSDAYLQSL CCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCHHHHHHC PYGKLPDRGDFKHLDSDSRIKYWQKSASMSKKLADDLAEVIDKGLLAERLERL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVSPLRFIAGPKAFKTLSENDFKPELFTQLLAASGGPKWIGIAALDRYLFSEFFKDLNQ CCCCCHHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH PLHTLGASSGAWRLACLAQANPSAAYDRLEQLYIGQRYDTKPTAVEVSKQVAGIIQGLLG HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC STGAMEIISHSQINSHYIACQARHINRLGGHAPLALGLAAAAMTNLVTRKSLAWHFKRCV CCCHHHHHHHHCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVEQGVSPYAELKDLPSEFYALSQNNIHQVLLATGSIPWVLAPVKTIDGAPKGHYYDGG HHHHHCCCHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCEEEECHHHCCCCCCCCCCCCC ITDYHFDLPLKQSQGLTLYPHFYPKMAPGWFDKSLPWRLAKANYDNALILAPSDAYLQSL CCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCHHHHHHC PYGKLPDRGDFKHLDSDSRIKYWQKSASMSKKLADDLAEVIDKGLLAERLERL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA