| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960341
Identifier: 157960341
GI number: 157960341
Start: 625582
End: 626406
Strand: Direct
Name: 157960341
Synonym: Spea_0512
Alternate gene names: NA
Gene position: 625582-626406 (Clockwise)
Preceding gene: 157960340
Following gene: 157960342
Centisome position: 12.09
GC content: 42.3
Gene sequence:
>825_bases ATGATGTCTCAATCTGTGGTAATGGTTATTGCCCAAAAAGAGATCAAAGATAGTCTGCGCAATCGCTGGGTTATTTTTAT CTCAATGATATTTTTGATTCTGGCATTGAGTGTCACTTTTGCTGGTAGCGCCGTAGCCGGACACCTCGCCATCCCCGAGC TCGACATCTTGATGTCGAGTCTGTCTACAGTCTCGGTCTTTATCATCCCCTTAGCGGCCATGCTAGTGAGCTACGATGCC TTTGTCGGGGAAGATGAGTCTGGTACGCTACTGTTGCTGCTGTCGTACCCTATCAGTCGATTGCAGATCTTAATGGGCAA ATTACTAGGGCATAGCTTGATTCTGGGCAGCACGATATGTTTTGCCTTTGGGATAACGGGGTTGTTACTCATGCTGTTTG GTGATGGGGATAATGTTCAGGCCACCTTCAGTCTATTCTCGCAATTTATATTTAGCAGTATTTTGTTAGCCATTACCTTT ATTTTATTGGGCTATATCGTCAGTTTAACGTCCTCTGAAAAAGCTAAGGCCGTGGGCAGTATTTTATTTGTTTGGTTCCT ATTTGTATTGATTTACGATTTGATCTTACTGACGATATTGGTAGCGGATCTCAGCTTTATAAATCAGTATATTATCAATA TTCTAATCGCACTGAACCCAACGGATCTCTATCGAGCAATTAATCTTATTGCTAGCGACTCAGGCAGTCTAGGAATGCTT TCTTCATCGACTTGGGGAGTGCTTACTCTTTATGGGGGAATGTTGGTTTGGGTTTCAGGATTATTGATTCTTGCCAGTCA GATATTTAAAAATCGAGCTCTGTAA
Upstream 100 bases:
>100_bases GAGTGCCAAGCTTTTGATTTCAGTCTTAAAGAGCCTGCTCTGGCTGAGATCTATCATTTTTACATGGGTCAATGCGCGCA ACTTGAAGTGGTGAGTTAAT
Downstream 100 bases:
>100_bases TACATCCAATAGTCAATATTAAGATACCAAGCAGAGGCTTTTTAGATTGATTTAAAAGGTATTTTAAATAAGGCATTAAC GAGAGGCTGCTAAATTTAGG
Product: ABC-2 type transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSSLSTVSVFIIPLAAMLVSYDA FVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTICFAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITF ILLGYIVSLTSSEKAKAVGSILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL
Sequences:
>Translated_274_residues MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSSLSTVSVFIIPLAAMLVSYDA FVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTICFAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITF ILLGYIVSLTSSEKAKAVGSILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL >Mature_274_residues MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSSLSTVSVFIIPLAAMLVSYDA FVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTICFAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITF ILLGYIVSLTSSEKAKAVGSILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL
Specific function: Involved in copper processing [H]
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29769; Mature: 29769
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHH LSTVSVFIIPLAAMLVSYDAFVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTIC HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH FAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITFILLGYIVSLTSSEKAKAVGS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEC SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHH LSTVSVFIIPLAAMLVSYDAFVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTIC HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH FAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITFILLGYIVSLTSSEKAKAVGS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEC SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2170125 [H]