Click here to switch to the map view.

The map label for this gene is 157960342

Identifier: 157960342

GI number: 157960342

Start: 626672

End: 627955

Strand: Direct

Name: 157960342

Synonym: Spea_0513

Alternate gene names: NA

Gene position: 626672-627955 (Clockwise)

Preceding gene: 157960341

Following gene: 157960343

Centisome position: 12.11

GC content: 43.15

Gene sequence:

>1284_bases
GTGCATAAAGTTACTCCTTATCTGGAGTTGGATGAAGAGGCTAAGCAATTAGTCGATCATGCGAATAATAAAACCATTAC
GCTGACGGTGTCGGAGTCGGCAGTTTTACATCAACTGATCCTTTCCATTAGCTCGGTGTGCACTAAAGAAGATTTGTTGG
CCGCTGGCTGGCCCGAGCGTGTTGTTGCCGCAACCTCGCTAACACAGTGTGTTAGCACTCTAAGAAAGAAGTTAGAACCT
TATCCAGAGGTGGTGCTGCGTACTATCGCTGGACGTGGTTATCAGCTTAACGTATCTACACGCTCTCATATTAAAATGTT
GGCGGTTAATGATGCCGAATCTGTACGTGCAGCACTGGTTGATGTGTCTTTGTTGGTAAAACTAAGCGGCATAGTCATTT
TGATCTTAATTGCTCTATCCATGTGGTATTTTAGTGATTATCACGGTGTGGTAAAAGCAAAGAATAGCTGGGATGCAACT
AAGAAAGTACCTCTAAATATTGGTGGCACTGAGCAAGATGTTCAGCTTATCCATAAAGATAATGTCGCCCATCTGCACCC
GTCAATGTGGCAAAAGCACCTGGCACCCGAGTCTAATCATCTGGACGGCATGAGCAAGTTTAACGGCTATGCGCTAACCG
ATGGTAATTACTATTCGATGGCTGTATGCCCTGATGCTGATCAGAATAAGTGTTTGGGTAAAGGCCTAATCAACATCACA
GCGATTGATTTAACGCCAGCGGGTTTGAATATGCAAACCTTTACTGAGTTGACTCATAAGATGGAGAAACGTATTCGCTA
TAACCGGGTGATTATCCCTCATGACGAGCCCGGTACCAGTGGTTTTGTTGAGCATCATTATCATGCTGATGTGTATTACC
CTGTGCAAGGGAATATGTTGGTACGCTCGGATATCAGTTTGTCGCTGATCTATAAAGGTGAGAACGTAGGTAAGTTTTAT
TCAGCAGCTTGCGTGACTGACGAAGAGTGCGAGACCACACCAATAAAGTACAAGATTAAAGGTGATTTTACTCAGTATCG
CGAAAAAATTAATGACTTGGATGTGGATGTGTTTCACGTAAAAGTCACTCAAAAAGATCTCATTAATCCTGAACATGTCA
GCCCGTCGGCAATGCATTTTTATCGTGAGATCCGTAAGCACGAGATCATCGATAGCGACCTGTATTTTTATCGTATCTAT
AAAGATTCTGAAACTGCCGTTTGGATCGTACCAATCTTAGGTAACCTTGTGGCTTGGTATGAGTATGACAAGGTGAAGCT
TTAA

Upstream 100 bases:

>100_bases
TATCTGGGGGAAATCACGTTTTTAATGTTTGATTCTAGTAAACTGACATTAATTTACGTTAATAACTGAGTTGCAGTTAA
TTGATTCATAGGGGATTAAT

Downstream 100 bases:

>100_bases
GTTTAAAAGCAGGTACTAGGTCTAAAAGCAGGTACTAGGTCCTAGGAAAAGTAGGGTCTAGGAACAAGCTGAGACGGGTA
AAGGCCGGTAAAGCTAAGAC

Product: transcriptional regulator CadC

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MHKVTPYLELDEEAKQLVDHANNKTITLTVSESAVLHQLILSISSVCTKEDLLAAGWPERVVAATSLTQCVSTLRKKLEP
YPEVVLRTIAGRGYQLNVSTRSHIKMLAVNDAESVRAALVDVSLLVKLSGIVILILIALSMWYFSDYHGVVKAKNSWDAT
KKVPLNIGGTEQDVQLIHKDNVAHLHPSMWQKHLAPESNHLDGMSKFNGYALTDGNYYSMAVCPDADQNKCLGKGLINIT
AIDLTPAGLNMQTFTELTHKMEKRIRYNRVIIPHDEPGTSGFVEHHYHADVYYPVQGNMLVRSDISLSLIYKGENVGKFY
SAACVTDEECETTPIKYKIKGDFTQYREKINDLDVDVFHVKVTQKDLINPEHVSPSAMHFYREIRKHEIIDSDLYFYRIY
KDSETAVWIVPILGNLVAWYEYDKVKL

Sequences:

>Translated_427_residues
MHKVTPYLELDEEAKQLVDHANNKTITLTVSESAVLHQLILSISSVCTKEDLLAAGWPERVVAATSLTQCVSTLRKKLEP
YPEVVLRTIAGRGYQLNVSTRSHIKMLAVNDAESVRAALVDVSLLVKLSGIVILILIALSMWYFSDYHGVVKAKNSWDAT
KKVPLNIGGTEQDVQLIHKDNVAHLHPSMWQKHLAPESNHLDGMSKFNGYALTDGNYYSMAVCPDADQNKCLGKGLINIT
AIDLTPAGLNMQTFTELTHKMEKRIRYNRVIIPHDEPGTSGFVEHHYHADVYYPVQGNMLVRSDISLSLIYKGENVGKFY
SAACVTDEECETTPIKYKIKGDFTQYREKINDLDVDVFHVKVTQKDLINPEHVSPSAMHFYREIRKHEIIDSDLYFYRIY
KDSETAVWIVPILGNLVAWYEYDKVKL
>Mature_427_residues
MHKVTPYLELDEEAKQLVDHANNKTITLTVSESAVLHQLILSISSVCTKEDLLAAGWPERVVAATSLTQCVSTLRKKLEP
YPEVVLRTIAGRGYQLNVSTRSHIKMLAVNDAESVRAALVDVSLLVKLSGIVILILIALSMWYFSDYHGVVKAKNSWDAT
KKVPLNIGGTEQDVQLIHKDNVAHLHPSMWQKHLAPESNHLDGMSKFNGYALTDGNYYSMAVCPDADQNKCLGKGLINIT
AIDLTPAGLNMQTFTELTHKMEKRIRYNRVIIPHDEPGTSGFVEHHYHADVYYPVQGNMLVRSDISLSLIYKGENVGKFY
SAACVTDEECETTPIKYKIKGDFTQYREKINDLDVDVFHVKVTQKDLINPEHVSPSAMHFYREIRKHEIIDSDLYFYRIY
KDSETAVWIVPILGNLVAWYEYDKVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48339; Mature: 48339

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKVTPYLELDEEAKQLVDHANNKTITLTVSESAVLHQLILSISSVCTKEDLLAAGWPER
CCCCCCCEECCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHCCCCHH
VVAATSLTQCVSTLRKKLEPYPEVVLRTIAGRGYQLNVSTRSHIKMLAVNDAESVRAALV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEECCHHHHHHHHH
DVSLLVKLSGIVILILIALSMWYFSDYHGVVKAKNSWDATKKVPLNIGGTEQDVQLIHKD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCHHHHHEEECC
NVAHLHPSMWQKHLAPESNHLDGMSKFNGYALTDGNYYSMAVCPDADQNKCLGKGLINIT
CCCEECHHHHHHHCCCCCCCCCCHHHCCCEEEECCCEEEEEECCCCCCCCHHHCCCEEEE
AIDLTPAGLNMQTFTELTHKMEKRIRYNRVIIPHDEPGTSGFVEHHYHADVYYPVQGNML
EEEECCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEEECEEEEECCCCEE
VRSDISLSLIYKGENVGKFYSAACVTDEECETTPIKYKIKGDFTQYREKINDLDVDVFHV
EECCCEEEEEEECCCCCCHHEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEE
KVTQKDLINPEHVSPSAMHFYREIRKHEIIDSDLYFYRIYKDSETAVWIVPILGNLVAWY
EECHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEHHCCHHHHE
EYDKVKL
ECCEECC
>Mature Secondary Structure
MHKVTPYLELDEEAKQLVDHANNKTITLTVSESAVLHQLILSISSVCTKEDLLAAGWPER
CCCCCCCEECCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHCCCCHH
VVAATSLTQCVSTLRKKLEPYPEVVLRTIAGRGYQLNVSTRSHIKMLAVNDAESVRAALV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCEEEEEECCHHHHHHHHH
DVSLLVKLSGIVILILIALSMWYFSDYHGVVKAKNSWDATKKVPLNIGGTEQDVQLIHKD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCHHHHHEEECC
NVAHLHPSMWQKHLAPESNHLDGMSKFNGYALTDGNYYSMAVCPDADQNKCLGKGLINIT
CCCEECHHHHHHHCCCCCCCCCCHHHCCCEEEECCCEEEEEECCCCCCCCHHHCCCEEEE
AIDLTPAGLNMQTFTELTHKMEKRIRYNRVIIPHDEPGTSGFVEHHYHADVYYPVQGNML
EEEECCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEEECEEEEECCCCEE
VRSDISLSLIYKGENVGKFYSAACVTDEECETTPIKYKIKGDFTQYREKINDLDVDVFHV
EECCCEEEEEEECCCCCCHHEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEE
KVTQKDLINPEHVSPSAMHFYREIRKHEIIDSDLYFYRIYKDSETAVWIVPILGNLVAWY
EECHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEHHCCHHHHE
EYDKVKL
ECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA