Click here to switch to the map view.

The map label for this gene is 157960308

Identifier: 157960308

GI number: 157960308

Start: 590051

End: 592087

Strand: Direct

Name: 157960308

Synonym: Spea_0479

Alternate gene names: NA

Gene position: 590051-592087 (Clockwise)

Preceding gene: 157960304

Following gene: 157960309

Centisome position: 11.4

GC content: 45.66

Gene sequence:

>2037_bases
ATGAAAAGTTGGAAACTTAAAGCAGTCGCGAGTGTACTGTTTTGTTTCGGCGCAATAGGTAACGCTAGTGCTGCTGGTGA
TAAGTACAATAGCATCCCAGAAATGGGTGCATCTGCTAAGAATGCAATTGCAAACTATGCTGGTACAGAAGAAAGAACAG
GTGTTAAATCGCTACACGATTATATTGTTCAAGAAGATGAGTTGTTTGATTTCTTATTTCAAAACCATCCAATGTTCAAA
TATCAAGAAGAAGGTAACTTAATTGGTGATTACCATATTAGTGACCGTGGTGAAGAATATTTAGATACTGGCGGAAGCCA
GGCATACAGTAAGCGTGTAGGTCGTCCAAGTGCAGTTCAGTACCGTCTAGGTGCTAAATCAACGTTGGATTTCCCAAACA
ATTTCGTAGGTCCAGAGAAGTGTGGTGAGTGTCACGCGACTCAGTTTGAGAAATGGCAACGTTCGCGCCACGCAAACGTA
GTGCGTTTCCCAAGCGAAATTACCGATAAAGAAGTACCAAATGGCGATTTGAATGCAAAGCTATACGGTAGTGATGCATC
AATGCTTCCAGACGGTATTCGTGCTAACGACGTGTACGCCATTATTGGTACACCACGTACTAAGTACGGTTTCCTAGATT
CATGGTTGGTTCGTGGTACTTACCACGTTCGTGACGGTTTGTTATCTGAAGGTACAGGCAAGATGGTTGCCGGTGCTAAC
CAGTTCTCTCGTGGTTGGGCTGAATGGCTAACTCCAGAGATGGCGAAGAAGATTAACAAAGCAATTCCAGAGTTCCCAGT
AACGCTAGAAGAGTTTGGCGCTACAGGTTCTCACCAGTGGGGTATGACTTCATACGGTGCTAAGTACGAGAAAGAGATGC
TTTTCCAACCTGGTAGCTCTTACTGTGAAATGTGCCACACGTATAAGTTTGACTTCCAAAACAAGCAAGAGTTCTTCGAT
GCACTTGGCGACGCTAAGAAGCTACAAGAGCACACTATCTCTAAGGGTATCTCTTGTGAAGAGTGTCATGGCGCGGGCGG
TCACTTAGATGGCGGTACTGGCGGCATGCAGTCTAACTGTGAACGTTGTCACCAGCGTTTCTTCTTCGTTGATGCACTAG
CTGATACAGAGCAAGCGCAAGAGAAGATGGAATACGCATTTGGCGTATACATGAAGTCTGCTTGTCCATCTTGTGGTACT
GAAGGTTCACAAATGTTTGCTTCTTCTCATTACGAGAAAGGTATGCGTTGTACAACTTGTCACGATCCACACGAAGTGAC
TGATGGCGACTTCCTATCAGGTTTCTCTAAGCCAATGCTGAAGAAAGACTGTGTTGATTGTCACGAAGCGCAAGCGATGA
TCGCTGACAACACAGACACACACAGCAACCAAACGTGTCAAAGCTGTCACATGCCTAACATGGGTAGCTGTGAAAACTTC
GCTGCGATTCAGTTCCCTGATAGCGCAGGTTTCGACGCGGTACGTCGTTCACACATGTGGAAGATTGATATCGACCCAGA
GCGTAAGACATTGAACCCTCCTGAAGGTCAACCACGTGATTCAGGCGTGAAAGGCTGGACTGTGGCTAAGAACGAAGAAG
GTCATAACTACTTAGACTTAATGTGGACTTGTGCTCGTACAGCGATTTCTGACAAAGACGTAGTGGATAACAAGGGTTGT
CACAGCCCATTCCAGTCTGAGCTAGAAACTGGCCTACATTACGACGACCAGCTAGAGATCTACGGCGAAGTGATGAAGAT
GCAAACGCCTGTTAAAGACGTTTACGCCAAAGTTGAACAAGCTCTTGAGCGCATCGATACGCTACTAGAAGTGACTAAGC
TGTCTACTGCAGACAAGACTGAAGTGCTAATGCTAGCTGAGAAAGCGCAAGAAACTATCGACCTAATCAAGAAAGATGGT
TCATGGGGTGTTCATGGCTTCCGTTACAGCCAGAAGCGTCTAGACGCAGCCCTAACTTATGTTACCCAAGCTCAGAACAT
TCTAGACGGTGTTGGTTACAGCGCTAAAAAGATGTAA

Upstream 100 bases:

>100_bases
ATAGCTGCAACTCGATTGTTTAGTTGTTCAGCTTAACAAGAGAGTGCCTAAGTTGAATGATGATGAAAATACTATAACTA
GGTTATAACTAGGAGTGATG

Downstream 100 bases:

>100_bases
TTGAGTTAATACCGACCTCAACCTAGGTGCGCTTAGGTTGAGGTAACTAAGAGAGAAACTATGAATAGAGTACTGGGAAG
TGTCGTTTTCACCGTCTTGT

Product: cytochrome c

Products: NA

Alternate protein names: tRNA Synthetase Class II; Cytochrome C Family Protein

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MKSWKLKAVASVLFCFGAIGNASAAGDKYNSIPEMGASAKNAIANYAGTEERTGVKSLHDYIVQEDELFDFLFQNHPMFK
YQEEGNLIGDYHISDRGEEYLDTGGSQAYSKRVGRPSAVQYRLGAKSTLDFPNNFVGPEKCGECHATQFEKWQRSRHANV
VRFPSEITDKEVPNGDLNAKLYGSDASMLPDGIRANDVYAIIGTPRTKYGFLDSWLVRGTYHVRDGLLSEGTGKMVAGAN
QFSRGWAEWLTPEMAKKINKAIPEFPVTLEEFGATGSHQWGMTSYGAKYEKEMLFQPGSSYCEMCHTYKFDFQNKQEFFD
ALGDAKKLQEHTISKGISCEECHGAGGHLDGGTGGMQSNCERCHQRFFFVDALADTEQAQEKMEYAFGVYMKSACPSCGT
EGSQMFASSHYEKGMRCTTCHDPHEVTDGDFLSGFSKPMLKKDCVDCHEAQAMIADNTDTHSNQTCQSCHMPNMGSCENF
AAIQFPDSAGFDAVRRSHMWKIDIDPERKTLNPPEGQPRDSGVKGWTVAKNEEGHNYLDLMWTCARTAISDKDVVDNKGC
HSPFQSELETGLHYDDQLEIYGEVMKMQTPVKDVYAKVEQALERIDTLLEVTKLSTADKTEVLMLAEKAQETIDLIKKDG
SWGVHGFRYSQKRLDAALTYVTQAQNILDGVGYSAKKM

Sequences:

>Translated_678_residues
MKSWKLKAVASVLFCFGAIGNASAAGDKYNSIPEMGASAKNAIANYAGTEERTGVKSLHDYIVQEDELFDFLFQNHPMFK
YQEEGNLIGDYHISDRGEEYLDTGGSQAYSKRVGRPSAVQYRLGAKSTLDFPNNFVGPEKCGECHATQFEKWQRSRHANV
VRFPSEITDKEVPNGDLNAKLYGSDASMLPDGIRANDVYAIIGTPRTKYGFLDSWLVRGTYHVRDGLLSEGTGKMVAGAN
QFSRGWAEWLTPEMAKKINKAIPEFPVTLEEFGATGSHQWGMTSYGAKYEKEMLFQPGSSYCEMCHTYKFDFQNKQEFFD
ALGDAKKLQEHTISKGISCEECHGAGGHLDGGTGGMQSNCERCHQRFFFVDALADTEQAQEKMEYAFGVYMKSACPSCGT
EGSQMFASSHYEKGMRCTTCHDPHEVTDGDFLSGFSKPMLKKDCVDCHEAQAMIADNTDTHSNQTCQSCHMPNMGSCENF
AAIQFPDSAGFDAVRRSHMWKIDIDPERKTLNPPEGQPRDSGVKGWTVAKNEEGHNYLDLMWTCARTAISDKDVVDNKGC
HSPFQSELETGLHYDDQLEIYGEVMKMQTPVKDVYAKVEQALERIDTLLEVTKLSTADKTEVLMLAEKAQETIDLIKKDG
SWGVHGFRYSQKRLDAALTYVTQAQNILDGVGYSAKKM
>Mature_678_residues
MKSWKLKAVASVLFCFGAIGNASAAGDKYNSIPEMGASAKNAIANYAGTEERTGVKSLHDYIVQEDELFDFLFQNHPMFK
YQEEGNLIGDYHISDRGEEYLDTGGSQAYSKRVGRPSAVQYRLGAKSTLDFPNNFVGPEKCGECHATQFEKWQRSRHANV
VRFPSEITDKEVPNGDLNAKLYGSDASMLPDGIRANDVYAIIGTPRTKYGFLDSWLVRGTYHVRDGLLSEGTGKMVAGAN
QFSRGWAEWLTPEMAKKINKAIPEFPVTLEEFGATGSHQWGMTSYGAKYEKEMLFQPGSSYCEMCHTYKFDFQNKQEFFD
ALGDAKKLQEHTISKGISCEECHGAGGHLDGGTGGMQSNCERCHQRFFFVDALADTEQAQEKMEYAFGVYMKSACPSCGT
EGSQMFASSHYEKGMRCTTCHDPHEVTDGDFLSGFSKPMLKKDCVDCHEAQAMIADNTDTHSNQTCQSCHMPNMGSCENF
AAIQFPDSAGFDAVRRSHMWKIDIDPERKTLNPPEGQPRDSGVKGWTVAKNEEGHNYLDLMWTCARTAISDKDVVDNKGC
HSPFQSELETGLHYDDQLEIYGEVMKMQTPVKDVYAKVEQALERIDTLLEVTKLSTADKTEVLMLAEKAQETIDLIKKDG
SWGVHGFRYSQKRLDAALTYVTQAQNILDGVGYSAKKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75577; Mature: 75577

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS51008 MULTIHEME_CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSWKLKAVASVLFCFGAIGNASAAGDKYNSIPEMGASAKNAIANYAGTEERTGVKSLHD
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHH
YIVQEDELFDFLFQNHPMFKYQEEGNLIGDYHISDRGEEYLDTGGSQAYSKRVGRPSAVQ
HHHCHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCHHHHHCCCCHHHHHHCCCCCCEE
YRLGAKSTLDFPNNFVGPEKCGECHATQFEKWQRSRHANVVRFPSEITDKEVPNGDLNAK
EECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCEEECCHHHCCCCCCCCCCCEE
LYGSDASMLPDGIRANDVYAIIGTPRTKYGFLDSWLVRGTYHVRDGLLSEGTGKMVAGAN
EECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCC
QFSRGWAEWLTPEMAKKINKAIPEFPVTLEEFGATGSHQWGMTSYGAKYEKEMLFQPGSS
HHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHH
YCEMCHTYKFDFQNKQEFFDALGDAKKLQEHTISKGISCEECHGAGGHLDGGTGGMQSNC
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHH
ERCHQRFFFVDALADTEQAQEKMEYAFGVYMKSACPSCGTEGSQMFASSHYEKGMRCTTC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECC
HDPHEVTDGDFLSGFSKPMLKKDCVDCHEAQAMIADNTDTHSNQTCQSCHMPNMGSCENF
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHCCCCCCCCCCCE
AAIQFPDSAGFDAVRRSHMWKIDIDPERKTLNPPEGQPRDSGVKGWTVAKNEEGHNYLDL
EEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH
MWTCARTAISDKDVVDNKGCHSPFQSELETGLHYDDQLEIYGEVMKMQTPVKDVYAKVEQ
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
ALERIDTLLEVTKLSTADKTEVLMLAEKAQETIDLIKKDGSWGVHGFRYSQKRLDAALTY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VTQAQNILDGVGYSAKKM
HHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MKSWKLKAVASVLFCFGAIGNASAAGDKYNSIPEMGASAKNAIANYAGTEERTGVKSLHD
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHH
YIVQEDELFDFLFQNHPMFKYQEEGNLIGDYHISDRGEEYLDTGGSQAYSKRVGRPSAVQ
HHHCHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCHHHHHCCCCHHHHHHCCCCCCEE
YRLGAKSTLDFPNNFVGPEKCGECHATQFEKWQRSRHANVVRFPSEITDKEVPNGDLNAK
EECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCEEECCHHHCCCCCCCCCCCEE
LYGSDASMLPDGIRANDVYAIIGTPRTKYGFLDSWLVRGTYHVRDGLLSEGTGKMVAGAN
EECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCC
QFSRGWAEWLTPEMAKKINKAIPEFPVTLEEFGATGSHQWGMTSYGAKYEKEMLFQPGSS
HHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHH
YCEMCHTYKFDFQNKQEFFDALGDAKKLQEHTISKGISCEECHGAGGHLDGGTGGMQSNC
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHH
ERCHQRFFFVDALADTEQAQEKMEYAFGVYMKSACPSCGTEGSQMFASSHYEKGMRCTTC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECC
HDPHEVTDGDFLSGFSKPMLKKDCVDCHEAQAMIADNTDTHSNQTCQSCHMPNMGSCENF
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHCCCCCCCCCCCE
AAIQFPDSAGFDAVRRSHMWKIDIDPERKTLNPPEGQPRDSGVKGWTVAKNEEGHNYLDL
EEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH
MWTCARTAISDKDVVDNKGCHSPFQSELETGLHYDDQLEIYGEVMKMQTPVKDVYAKVEQ
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
ALERIDTLLEVTKLSTADKTEVLMLAEKAQETIDLIKKDGSWGVHGFRYSQKRLDAALTY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VTQAQNILDGVGYSAKKM
HHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA