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The map label for this gene is yniC [H]

Identifier: 157960253

GI number: 157960253

Start: 525248

End: 525916

Strand: Reverse

Name: yniC [H]

Synonym: Spea_0424

Alternate gene names: 157960253

Gene position: 525916-525248 (Counterclockwise)

Preceding gene: 157960255

Following gene: 157960244

Centisome position: 10.16

GC content: 43.5

Gene sequence:

>669_bases
ATGAGTACACCAGAGCTAAAAGCCGTTATTTTCGACATGGACGGCGTATTGATCGACTCGGAGCCAGTTTGGCAAATAGC
CGAGTATAGGGTGCTGAGCGAGTTAGGTTTAAACATATCTATGCAAGATATGCTTCTAACTACGGGACTCAGAATCGATC
AGGTTGTTGATTATTGGTATGCGCGCTTTCCGTGGAAAAACTATGATAACCAACAAACGGCTCAAGCCATTGTCGATCAG
GTTGTTAGCCATATTGCAGCCAACGGTGAACCGATGAAGGGCGTATTATCAGCGCTTAATGCTTGTAGAGAACGAGGGCT
AAAAGTCGGTCTAGCCACCTCCTCTTCGAGCGATATTATTAATGCCGTTTTAAACAAGTTAGAGATAGCCACATATTTTC
AAGCAATCAAATCGGCTGAGCATTTAACCTATGGAAAACCCCACCCCGAAGTCTATTTAAATTGTGCTCAGGCGCTTAAT
ATTGATCCTATCTATTGTTTAGCCATTGAAGATTCATTTAATGGATTAATCGCCGCCCGTGCAGCTAACATGCAAACAGC
TGCGATCCCTGACCCACAACAAGCCGACCTTAGTAAGTGGGTCGTAGCCCATAAGCAACTCAATAGCCTAGAAGATTTAC
CTGAGTATTTAATGTACTTACGACCATAA

Upstream 100 bases:

>100_bases
TCCGGTAAGTTTTAGTACTATCATTGTCGTATTATTCGTAAAAACGACCATATAAACCGCTAATATTCACCAAAGTTATA
ATGAACATAATTGGATACTT

Downstream 100 bases:

>100_bases
AAGCAAAAAGCCCATCAATCGATGGGCTTTTGTCTAATCGGCTCTTTGGTCAAAGCATCAGCATTACATAACCGCACTCA
CCTAAGCTCTACCAGTTCTT

Product: 2-deoxyglucose-6-phosphatase

Products: glycerol; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSTPELKAVIFDMDGVLIDSEPVWQIAEYRVLSELGLNISMQDMLLTTGLRIDQVVDYWYARFPWKNYDNQQTAQAIVDQ
VVSHIAANGEPMKGVLSALNACRERGLKVGLATSSSSDIINAVLNKLEIATYFQAIKSAEHLTYGKPHPEVYLNCAQALN
IDPIYCLAIEDSFNGLIAARAANMQTAAIPDPQQADLSKWVVAHKQLNSLEDLPEYLMYLRP

Sequences:

>Translated_222_residues
MSTPELKAVIFDMDGVLIDSEPVWQIAEYRVLSELGLNISMQDMLLTTGLRIDQVVDYWYARFPWKNYDNQQTAQAIVDQ
VVSHIAANGEPMKGVLSALNACRERGLKVGLATSSSSDIINAVLNKLEIATYFQAIKSAEHLTYGKPHPEVYLNCAQALN
IDPIYCLAIEDSFNGLIAARAANMQTAAIPDPQQADLSKWVVAHKQLNSLEDLPEYLMYLRP
>Mature_221_residues
STPELKAVIFDMDGVLIDSEPVWQIAEYRVLSELGLNISMQDMLLTTGLRIDQVVDYWYARFPWKNYDNQQTAQAIVDQV
VSHIAANGEPMKGVLSALNACRERGLKVGLATSSSSDIINAVLNKLEIATYFQAIKSAEHLTYGKPHPEVYLNCAQALNI
DPIYCLAIEDSFNGLIAARAANMQTAAIPDPQQADLSKWVVAHKQLNSLEDLPEYLMYLRP

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1788021, Length=215, Percent_Identity=44.6511627906977, Blast_Score=196, Evalue=7e-52,
Organism=Escherichia coli, GI1789046, Length=180, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1787576, Length=193, Percent_Identity=27.4611398963731, Blast_Score=69, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17137324, Length=219, Percent_Identity=30.1369863013699, Blast_Score=81, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.1.3.21

Molecular weight: Translated: 24716; Mature: 24584

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPELKAVIFDMDGVLIDSEPVWQIAEYRVLSELGLNISMQDMLLTTGLRIDQVVDYWY
CCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHH
ARFPWKNYDNQQTAQAIVDQVVSHIAANGEPMKGVLSALNACRERGLKVGLATSSSSDII
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHH
NAVLNKLEIATYFQAIKSAEHLTYGKPHPEVYLNCAQALNIDPIYCLAIEDSFNGLIAAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEH
AANMQTAAIPDPQQADLSKWVVAHKQLNSLEDLPEYLMYLRP
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STPELKAVIFDMDGVLIDSEPVWQIAEYRVLSELGLNISMQDMLLTTGLRIDQVVDYWY
CCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHH
ARFPWKNYDNQQTAQAIVDQVVSHIAANGEPMKGVLSALNACRERGLKVGLATSSSSDII
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHH
NAVLNKLEIATYFQAIKSAEHLTYGKPHPEVYLNCAQALNIDPIYCLAIEDSFNGLIAAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEH
AANMQTAAIPDPQQADLSKWVVAHKQLNSLEDLPEYLMYLRP
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: glycerol 1-phosphate; H2O

Specific reaction: glycerol 1-phosphate + H2O = glycerol + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]