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The map label for this gene is ppdD [C]

Identifier: 157960243

GI number: 157960243

Start: 507007

End: 507453

Strand: Reverse

Name: ppdD [C]

Synonym: Spea_0414

Alternate gene names: 157960243

Gene position: 507453-507007 (Counterclockwise)

Preceding gene: 157960244

Following gene: 157960242

Centisome position: 9.81

GC content: 42.51

Gene sequence:

>447_bases
ATGAAAAGCATGATGAAATCAAACATGAATAACGCTAAGGGCTTCACCCTAATTGAATTGATGATCGTAGTTGCGATTAT
CGGTATCTTAGCAGCAGTAGCATTGCCTGCGTATAAAGATTATGTGACCTCAGCCCAAGGTAGCGGCGCGATGAAAGGCG
TTTCAACCTTCGCCCAAAAAATCCCAACTTGTATTCAAACTGGTATCGGTTGTGATGAAATTAAGGCTGAAGTAAATGCT
AATGCAAAGTTCACCACTCTTGCAGCTGATGTAGCGCAAGATGCAGAAACAGTTCTAGTGTGGACAGAAGCTAAGTGTAT
TTTGACTGCGACATTTGCTGCTACGGGGTCAGTGTCTTATGTAATGACCAAAGCAACTGGTGCAACTGCTGATGATTTAG
AGCTTTGTGAAAAAGCAGCGGGTCTATATGTAGCACCATCAGTATAA

Upstream 100 bases:

>100_bases
TGACCATTAGCATAGGAAATTGCGACGTGCTAGCGCAGGAGCATCAAGCAAGGTTGAAGCACTAGCTTACTGATATAACA
GCTTTCTAATGGAGATAGAC

Downstream 100 bases:

>100_bases
AAGGTTACATTCAGTAGCTGTATACTAATATTCAATGCCAACAACCGGCCTTCACTTAGGGTTATCGACCCTCTTTATTC
GCAAAGGTTTGCTTAATGAA

Product: methylation site containing protein

Products: NA

Alternate protein names: General Secretion Pathway Protein; Methylation

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKSMMKSNMNNAKGFTLIELMIVVAIIGILAAVALPAYKDYVTSAQGSGAMKGVSTFAQKIPTCIQTGIGCDEIKAEVNA
NAKFTTLAADVAQDAETVLVWTEAKCILTATFAATGSVSYVMTKATGATADDLELCEKAAGLYVAPSV

Sequences:

>Translated_148_residues
MKSMMKSNMNNAKGFTLIELMIVVAIIGILAAVALPAYKDYVTSAQGSGAMKGVSTFAQKIPTCIQTGIGCDEIKAEVNA
NAKFTTLAADVAQDAETVLVWTEAKCILTATFAATGSVSYVMTKATGATADDLELCEKAAGLYVAPSV
>Mature_148_residues
MKSMMKSNMNNAKGFTLIELMIVVAIIGILAAVALPAYKDYVTSAQGSGAMKGVSTFAQKIPTCIQTGIGCDEIKAEVNA
NAKFTTLAADVAQDAETVLVWTEAKCILTATFAATGSVSYVMTKATGATADDLELCEKAAGLYVAPSV

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15339; Mature: 15339

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMMKSNMNNAKGFTLIELMIVVAIIGILAAVALPAYKDYVTSAQGSGAMKGVSTFAQK
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IPTCIQTGIGCDEIKAEVNANAKFTTLAADVAQDAETVLVWTEAKCILTATFAATGSVSY
HHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHCCCCEEEEEECCCEEEEEEHHCCCCEEE
VMTKATGATADDLELCEKAAGLYVAPSV
EEEECCCCCHHHHHHHHHHCCEEECCCC
>Mature Secondary Structure
MKSMMKSNMNNAKGFTLIELMIVVAIIGILAAVALPAYKDYVTSAQGSGAMKGVSTFAQK
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IPTCIQTGIGCDEIKAEVNANAKFTTLAADVAQDAETVLVWTEAKCILTATFAATGSVSY
HHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHCCCCEEEEEECCCEEEEEEHHCCCCEEE
VMTKATGATADDLELCEKAAGLYVAPSV
EEEECCCCCHHHHHHHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA