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The map label for this gene is yigB [H]

Identifier: 157960210

GI number: 157960210

Start: 460359

End: 461075

Strand: Direct

Name: yigB [H]

Synonym: Spea_0381

Alternate gene names: 157960210

Gene position: 460359-461075 (Clockwise)

Preceding gene: 157960209

Following gene: 157960211

Centisome position: 8.9

GC content: 45.33

Gene sequence:

>717_bases
ATGAAGATCTATATTCGACCACAAGCTTTTGAGGCCATTAGTTTCGACTTGGACGATACCTTATATGATAATCGGCCCAT
CATTCGAAGAGCAGAAGCCGAGATGCAGCAGTTTTTGCATCACGCTTATCCGAAATCGACAAAATGGCAATTCGATGACT
GGCGTAAGCTAAAGCTTTCCTTGTTTAGACTGTATCCAGAGTTGCGTCATGACACCAGCTTAGCAAGACTGGTAATGCTG
GAGCATGGCCTTAAAAAATTGGGTTATGACGAGAAATTAGCAAAGGCAGGTGCTAATGCAGGCCTTGAACACTTTGTGAA
ACATCGTAGTCATTTTAAGGTCTCCGATGAGGTGGTTGAGTTATTAACTCAGCTTAAACAGAAATATCGCTTAATCGGCA
TCACCAATGGCAACGTTGATCATCAAGGTATTGGCTTAGCCGAAGTATTTGAGTTTGTGCTGCACCCGGGACAAGGTTAC
AAGCAAAAGCCATCGAGCGATATGTTTGCGCTAGCGGCTAAGAAACTGGATTTGCCTCTAAGCAATATTCTTCATGTGGG
CGACAGTGGCAAGAGTGACGTCGACGGGGCAAGACGAGCGGGTTGCCAATCTGTGTGGCTTAATCCGGGCTTTAGCGTGA
CAGAGAAGTCGAGCGCTAACGGACAACTACCCCATATTGAAATCGATTCGTTGCAGCAGTTAAGGCTGTTTATCTAA

Upstream 100 bases:

>100_bases
ATCTGTCTACCACTCAGGTATATACCAGCCTAGACTTCCAACATCTTGCCAAAGTCTATGACAATGCACATCCGCGAGCG
AAGAAGCGAGGCGATAAAGC

Downstream 100 bases:

>100_bases
TTCGTTGAGTCCATCGAATGTTGAACGCTTGTTATTTCCCTCTGTCTTGATATGCTCAGCTCTCTTAAAAGTTAAGAAGA
ACAGAGTTTTATAAGATAGG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKIYIRPQAFEAISFDLDDTLYDNRPIIRRAEAEMQQFLHHAYPKSTKWQFDDWRKLKLSLFRLYPELRHDTSLARLVML
EHGLKKLGYDEKLAKAGANAGLEHFVKHRSHFKVSDEVVELLTQLKQKYRLIGITNGNVDHQGIGLAEVFEFVLHPGQGY
KQKPSSDMFALAAKKLDLPLSNILHVGDSGKSDVDGARRAGCQSVWLNPGFSVTEKSSANGQLPHIEIDSLQQLRLFI

Sequences:

>Translated_238_residues
MKIYIRPQAFEAISFDLDDTLYDNRPIIRRAEAEMQQFLHHAYPKSTKWQFDDWRKLKLSLFRLYPELRHDTSLARLVML
EHGLKKLGYDEKLAKAGANAGLEHFVKHRSHFKVSDEVVELLTQLKQKYRLIGITNGNVDHQGIGLAEVFEFVLHPGQGY
KQKPSSDMFALAAKKLDLPLSNILHVGDSGKSDVDGARRAGCQSVWLNPGFSVTEKSSANGQLPHIEIDSLQQLRLFI
>Mature_238_residues
MKIYIRPQAFEAISFDLDDTLYDNRPIIRRAEAEMQQFLHHAYPKSTKWQFDDWRKLKLSLFRLYPELRHDTSLARLVML
EHGLKKLGYDEKLAKAGANAGLEHFVKHRSHFKVSDEVVELLTQLKQKYRLIGITNGNVDHQGIGLAEVFEFVLHPGQGY
KQKPSSDMFALAAKKLDLPLSNILHVGDSGKSDVDGARRAGCQSVWLNPGFSVTEKSSANGQLPHIEIDSLQQLRLFI

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=238, Percent_Identity=39.0756302521008, Blast_Score=173, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27122; Mature: 27122

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYIRPQAFEAISFDLDDTLYDNRPIIRRAEAEMQQFLHHAYPKSTKWQFDDWRKLKLS
CEEEECCCHHHHEECCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LFRLYPELRHDTSLARLVMLEHGLKKLGYDEKLAKAGANAGLEHFVKHRSHFKVSDEVVE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH
LLTQLKQKYRLIGITNGNVDHQGIGLAEVFEFVLHPGQGYKQKPSSDMFALAAKKLDLPL
HHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCH
SNILHVGDSGKSDVDGARRAGCQSVWLNPGFSVTEKSSANGQLPHIEIDSLQQLRLFI
HHHEECCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCC
>Mature Secondary Structure
MKIYIRPQAFEAISFDLDDTLYDNRPIIRRAEAEMQQFLHHAYPKSTKWQFDDWRKLKLS
CEEEECCCHHHHEECCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LFRLYPELRHDTSLARLVMLEHGLKKLGYDEKLAKAGANAGLEHFVKHRSHFKVSDEVVE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH
LLTQLKQKYRLIGITNGNVDHQGIGLAEVFEFVLHPGQGYKQKPSSDMFALAAKKLDLPL
HHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCH
SNILHVGDSGKSDVDGARRAGCQSVWLNPGFSVTEKSSANGQLPHIEIDSLQQLRLFI
HHHEECCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]