| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960211
Identifier: 157960211
GI number: 157960211
Start: 461183
End: 461647
Strand: Direct
Name: 157960211
Synonym: Spea_0382
Alternate gene names: NA
Gene position: 461183-461647 (Clockwise)
Preceding gene: 157960210
Following gene: 157960213
Centisome position: 8.91
GC content: 41.08
Gene sequence:
>465_bases ATGAAAAAACTAATTATTGTGTTATCAGCTTTAATGCTCACCAGTGCTTGCTCAATTAAGCAGCGTGTTGATCCGGTTCA TGTGAACAATAATGCTGAAGTTTGTATCCAGAAGAACCCTGATGTGAGGGATGGTTTTTTGCAGGAGATGGAGAAGATTC TTGCAGAGAAACAGATTAAATATCGTATTGTTGAACAGTTAGATGCTAGTCAACAATGTGAGTGGACAGCGACTTACACT GCAAACTGGCGCTGGGATCTAGCGTTATATATGGTTTACGCCGAGATTAAAGTCTTCCATGAAGGTCGTTTAGATGGTGA AGCTATCTATGATGCTCGAAGCGGTGGAGCAAATATGAATAAATTTATTGATGCGGAGCCTAAAATTCGTGAGCTAATCG AACAGCTTATACAGCAAAAGCAAGCATCAGTGCGCTGGTCGCCATTGCAGCAAACTGCAATTTAG
Upstream 100 bases:
>100_bases AGTCCATCGAATGTTGAACGCTTGTTATTTCCCTCTGTCTTGATATGCTCAGCTCTCTTAAAAGTTAAGAAGAACAGAGT TTTATAAGATAGGGATTATC
Downstream 100 bases:
>100_bases TAACAAGGCTCACCTCGGTGAGCCTTTCTGTTCTAGCTGGTTTACTGGGGGCTTAGATTTACGCTGTTAGCGCGAGTGCC TTTGGGAACAAGATATTGTT
Product: Egg lysin (Sperm-lysin)
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKKLIIVLSALMLTSACSIKQRVDPVHVNNNAEVCIQKNPDVRDGFLQEMEKILAEKQIKYRIVEQLDASQQCEWTATYT ANWRWDLALYMVYAEIKVFHEGRLDGEAIYDARSGGANMNKFIDAEPKIRELIEQLIQQKQASVRWSPLQQTAI
Sequences:
>Translated_154_residues MKKLIIVLSALMLTSACSIKQRVDPVHVNNNAEVCIQKNPDVRDGFLQEMEKILAEKQIKYRIVEQLDASQQCEWTATYT ANWRWDLALYMVYAEIKVFHEGRLDGEAIYDARSGGANMNKFIDAEPKIRELIEQLIQQKQASVRWSPLQQTAI >Mature_154_residues MKKLIIVLSALMLTSACSIKQRVDPVHVNNNAEVCIQKNPDVRDGFLQEMEKILAEKQIKYRIVEQLDASQQCEWTATYT ANWRWDLALYMVYAEIKVFHEGRLDGEAIYDARSGGANMNKFIDAEPKIRELIEQLIQQKQASVRWSPLQQTAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17756; Mature: 17756
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIIVLSALMLTSACSIKQRVDPVHVNNNAEVCIQKNPDVRDGFLQEMEKILAEKQIK CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH YRIVEQLDASQQCEWTATYTANWRWDLALYMVYAEIKVFHEGRLDGEAIYDARSGGANMN HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCC KFIDAEPKIRELIEQLIQQKQASVRWSPLQQTAI CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure MKKLIIVLSALMLTSACSIKQRVDPVHVNNNAEVCIQKNPDVRDGFLQEMEKILAEKQIK CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH YRIVEQLDASQQCEWTATYTANWRWDLALYMVYAEIKVFHEGRLDGEAIYDARSGGANMN HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCC KFIDAEPKIRELIEQLIQQKQASVRWSPLQQTAI CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA