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The map label for this gene is betI [C]

Identifier: 157960188

GI number: 157960188

Start: 411042

End: 411653

Strand: Reverse

Name: betI [C]

Synonym: Spea_0359

Alternate gene names: 157960188

Gene position: 411653-411042 (Counterclockwise)

Preceding gene: 157960190

Following gene: 157960187

Centisome position: 7.96

GC content: 44.12

Gene sequence:

>612_bases
ATGAATGAACGTTCATTCATTTTTGATATTATTATGCACAACAAATACGATCTGATTCTTCGCGCCGCCGAAAAAATTAT
TGCTACAGGCGGAATACAGGGCCTGTCTATGCAACAGGTTGCAACTGAAGCAGGTGTCGCCGCTGGCACCATTTATCGCT
ATTTCAAAGATAAGAATGAGCTCATCTTAGAGCTCAGAAAAGACGTACTCTCTCAAGTTGCTGGCGCCATTTTGGCCGAT
CATGACCTAGGCACCCTAGAGCAGAGATTTAAACGGATCTGGATGAAAATGCATAACTACGGCAAGCAACGCACTTCAAC
CAATTTAAGTTATGAGCAATACGCTCATCTACCTGAAAGTAATACCAATGAGATCCGCCAGTTAGAGATGGAGCTGTTCG
CACCGTTACAGCAACTCTTCGAAGAGGGCATTAAACAAGGCTTGATCCAGCCATTAAACCCTCGATTCCTATATGCCATC
GCGATGGAGCCCTCTATGGCAATAGCGCGTTCAATTAGGCGCGGACTGATTGAATACAACGAAAAAGATATCACACTTGC
CTGCGATATATGCTGGCAAGCCATTTTAATCCCAACTACATCGACAAACTAA

Upstream 100 bases:

>100_bases
TTGCGACTATATTTATCAATAATTAACTCATTAGCTTTTTGTGAAGCACTGAAATTTTGACATGCCCCTATTGCTAATAC
TTTAGTCTGACATTAAACTA

Downstream 100 bases:

>100_bases
AGGAGTTATCAGGACATGAAAAAGTGGACCCTGGTGATGATCATCATTGCAGTACTGGCTTTTGGCTCAGTCATTGGCTT
TAATCTTTTTATTAAAGGAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MNERSFIFDIIMHNKYDLILRAAEKIIATGGIQGLSMQQVATEAGVAAGTIYRYFKDKNELILELRKDVLSQVAGAILAD
HDLGTLEQRFKRIWMKMHNYGKQRTSTNLSYEQYAHLPESNTNEIRQLEMELFAPLQQLFEEGIKQGLIQPLNPRFLYAI
AMEPSMAIARSIRRGLIEYNEKDITLACDICWQAILIPTTSTN

Sequences:

>Translated_203_residues
MNERSFIFDIIMHNKYDLILRAAEKIIATGGIQGLSMQQVATEAGVAAGTIYRYFKDKNELILELRKDVLSQVAGAILAD
HDLGTLEQRFKRIWMKMHNYGKQRTSTNLSYEQYAHLPESNTNEIRQLEMELFAPLQQLFEEGIKQGLIQPLNPRFLYAI
AMEPSMAIARSIRRGLIEYNEKDITLACDICWQAILIPTTSTN
>Mature_203_residues
MNERSFIFDIIMHNKYDLILRAAEKIIATGGIQGLSMQQVATEAGVAAGTIYRYFKDKNELILELRKDVLSQVAGAILAD
HDLGTLEQRFKRIWMKMHNYGKQRTSTNLSYEQYAHLPESNTNEIRQLEMELFAPLQQLFEEGIKQGLIQPLNPRFLYAI
AMEPSMAIARSIRRGLIEYNEKDITLACDICWQAILIPTTSTN

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23241; Mature: 23241

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERSFIFDIIMHNKYDLILRAAEKIIATGGIQGLSMQQVATEAGVAAGTIYRYFKDKNE
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCHHH
LILELRKDVLSQVAGAILADHDLGTLEQRFKRIWMKMHNYGKQRTSTNLSYEQYAHLPES
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHCCCCC
NTNEIRQLEMELFAPLQQLFEEGIKQGLIQPLNPRFLYAIAMEPSMAIARSIRRGLIEYN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC
EKDITLACDICWQAILIPTTSTN
CCCEEEEHHHHHHHHEECCCCCC
>Mature Secondary Structure
MNERSFIFDIIMHNKYDLILRAAEKIIATGGIQGLSMQQVATEAGVAAGTIYRYFKDKNE
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCHHH
LILELRKDVLSQVAGAILADHDLGTLEQRFKRIWMKMHNYGKQRTSTNLSYEQYAHLPES
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHCCCCC
NTNEIRQLEMELFAPLQQLFEEGIKQGLIQPLNPRFLYAIAMEPSMAIARSIRRGLIEYN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC
EKDITLACDICWQAILIPTTSTN
CCCEEEEHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]