| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960184
Identifier: 157960184
GI number: 157960184
Start: 405421
End: 406278
Strand: Direct
Name: 157960184
Synonym: Spea_0355
Alternate gene names: NA
Gene position: 405421-406278 (Clockwise)
Preceding gene: 157960179
Following gene: 157960189
Centisome position: 7.83
GC content: 44.52
Gene sequence:
>858_bases ATGTCAAACATACTAAAACACTTGTCCGTTGCTAGCAGTGTTGTGATCGCGCGGATCTTGTTAGCGAGCTTTTTATTGCT GACGGCAATACCTAGATTTACTGCAAATGATTCAAGCTATTTCACTAAGCAACTCATGGAGATCGGTCTGGCTGATCTAC CTTGGCTTAGTCCTGCAATTGGTATTGTGCAACTACTGACGGCACTTGCGCTGCTTAAGCCGCAAAATAGCTGGGCGCAG TTAATGATTTACCTTTACGCTGGGCTCGCCATTGTGCCGTTATTAATGCTGTTTACTCACCCTGTATGGCTGGATAGTTT AGGCGGCTTCCCTGCAATTGGCGCTGGGCAGGGCCTTATTAAGTACTTAGGGATCTCGGCTTTAGCGCTATTTATAGCTT CTTATTATGGCGGCAAACAAGCGCTCAATGCTATGGCAGAAAAATCGATGCTAGCTGGGATTGTAATGGTAATGGCATGG ATTGGCGGCATGAAGTTTACCCAGTATGAAGCCGACGGTATTGAAGGCCTAATGAGTACTAGCCCGTTGTTTAGTTGGAT ATACGATATCTTTAGTGTATTGCACGGCTCGTATTTTATTGGCGTGATAGAGCTCGTTGCTGTGGCTGGTATTGTGTTAG CCTCATGGTCGAATAAAGCCTATGGTTTAGGCCTTACCATTGCAGCGTTAACCTTTGCCGCAACGCAAACTTTCTTAGTC ACCTTACCCGCTTATGAAACCAGTTCAACAGTGCCGATGCTTACGGAAAGTGGTCAGTTTATTGTGAAAGATTTAGCGTT ATTGGCCTGTAGTATTTTACTATTTGCCAAAATGCTGGAGGAAAATAAACGCATATAA
Upstream 100 bases:
>100_bases CTGCGGATGAAGCATAAATTAATCTTATTTCATAGAATACTTAATTGGATGAAAGGCTTTACTGATTTTGTAGGTCTACT GCAAAAAATTGGAGTCTTAT
Downstream 100 bases:
>100_bases TTAGAGGTTTGTGAGCCAAAAAACAAAAAAAGAGCATGGTTTATGATGCTCTTTTTTTGGCTACTAGAGATAAACTTACT CAGCAGAGTTAAGCTTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSNILKHLSVASSVVIARILLASFLLLTAIPRFTANDSSYFTKQLMEIGLADLPWLSPAIGIVQLLTALALLKPQNSWAQ LMIYLYAGLAIVPLLMLFTHPVWLDSLGGFPAIGAGQGLIKYLGISALALFIASYYGGKQALNAMAEKSMLAGIVMVMAW IGGMKFTQYEADGIEGLMSTSPLFSWIYDIFSVLHGSYFIGVIELVAVAGIVLASWSNKAYGLGLTIAALTFAATQTFLV TLPAYETSSTVPMLTESGQFIVKDLALLACSILLFAKMLEENKRI
Sequences:
>Translated_285_residues MSNILKHLSVASSVVIARILLASFLLLTAIPRFTANDSSYFTKQLMEIGLADLPWLSPAIGIVQLLTALALLKPQNSWAQ LMIYLYAGLAIVPLLMLFTHPVWLDSLGGFPAIGAGQGLIKYLGISALALFIASYYGGKQALNAMAEKSMLAGIVMVMAW IGGMKFTQYEADGIEGLMSTSPLFSWIYDIFSVLHGSYFIGVIELVAVAGIVLASWSNKAYGLGLTIAALTFAATQTFLV TLPAYETSSTVPMLTESGQFIVKDLALLACSILLFAKMLEENKRI >Mature_284_residues SNILKHLSVASSVVIARILLASFLLLTAIPRFTANDSSYFTKQLMEIGLADLPWLSPAIGIVQLLTALALLKPQNSWAQL MIYLYAGLAIVPLLMLFTHPVWLDSLGGFPAIGAGQGLIKYLGISALALFIASYYGGKQALNAMAEKSMLAGIVMVMAWI GGMKFTQYEADGIEGLMSTSPLFSWIYDIFSVLHGSYFIGVIELVAVAGIVLASWSNKAYGLGLTIAALTFAATQTFLVT LPAYETSSTVPMLTESGQFIVKDLALLACSILLFAKMLEENKRI
Specific function: Unknown
COG id: COG3059
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30703; Mature: 30572
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNILKHLSVASSVVIARILLASFLLLTAIPRFTANDSSYFTKQLMEIGLADLPWLSPAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHH GIVQLLTALALLKPQNSWAQLMIYLYAGLAIVPLLMLFTHPVWLDSLGGFPAIGAGQGLI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHH KYLGISALALFIASYYGGKQALNAMAEKSMLAGIVMVMAWIGGMKFTQYEADGIEGLMST HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHC SPLFSWIYDIFSVLHGSYFIGVIELVAVAGIVLASWSNKAYGLGLTIAALTFAATQTFLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEE TLPAYETSSTVPMLTESGQFIVKDLALLACSILLFAKMLEENKRI EECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNILKHLSVASSVVIARILLASFLLLTAIPRFTANDSSYFTKQLMEIGLADLPWLSPAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHH GIVQLLTALALLKPQNSWAQLMIYLYAGLAIVPLLMLFTHPVWLDSLGGFPAIGAGQGLI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHH KYLGISALALFIASYYGGKQALNAMAEKSMLAGIVMVMAWIGGMKFTQYEADGIEGLMST HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHC SPLFSWIYDIFSVLHGSYFIGVIELVAVAGIVLASWSNKAYGLGLTIAALTFAATQTFLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEE TLPAYETSSTVPMLTESGQFIVKDLALLACSILLFAKMLEENKRI EECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA