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The map label for this gene is bkdR [H]

Identifier: 157960182

GI number: 157960182

Start: 403619

End: 404107

Strand: Reverse

Name: bkdR [H]

Synonym: Spea_0353

Alternate gene names: 157960182

Gene position: 404107-403619 (Counterclockwise)

Preceding gene: 157960183

Following gene: 157960181

Centisome position: 7.81

GC content: 47.03

Gene sequence:

>489_bases
ATGGAAGCGAGCATGGCTGAACTGCAATTAGACAAAATTGATCTGCACATCCTTAAATTGATGCAGCTACATGGAAAATT
GTCCAACCAAGAGCTTGCCGAGAAAGTCGGCTTATCACCCTCGCCCTGTTCGAGACGAGTGAAGTCACTGGAAGAGGCGG
GTTATATTGCAGGCTATGCGACCTTGCTCAGCGCCGAGCATTTCGATCTAGCTCTGACCGCCTACATTCAAGTTCGTTTA
GAGAAACACTCCACCGAAATTTTAGAGGCTTTCGAGGTCAAGGTAAGCAGCTATGATGAAGTGCAAGAGTGCTGCCTACT
CACGGGTAGCGACGCCGATTACCAACTCAAGGTGCTTGTCAGAGATATGAAGCACTTTAAAATCTTCCTGCTCGATAAGC
TCACCACTAACGATCATATCGCGGGTGTGCGTTCAAGCTTCGTGCTAAAGCAAGTTAAAAACCAAACCAGTATCCCACTG
CCAATTTAA

Upstream 100 bases:

>100_bases
CTTATTAAACGGCTCGCTTGCGCTTGATATCAATTAAGGTATTCTGCCTGCAAAGGAAGCAATACTTTACTTAAACTCAA
ACGATTACCCCTAAACTTTG

Downstream 100 bases:

>100_bases
CTGTTTTTTGAAGCAACACTTTTTAAACGAGGACCCCTTTAAACGAGTACTCCTTTAAATGAGTGCTCTTTTGAATTAGC
AGTTTTTGAGTTTCCCCTTC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MEASMAELQLDKIDLHILKLMQLHGKLSNQELAEKVGLSPSPCSRRVKSLEEAGYIAGYATLLSAEHFDLALTAYIQVRL
EKHSTEILEAFEVKVSSYDEVQECCLLTGSDADYQLKVLVRDMKHFKIFLLDKLTTNDHIAGVRSSFVLKQVKNQTSIPL
PI

Sequences:

>Translated_162_residues
MEASMAELQLDKIDLHILKLMQLHGKLSNQELAEKVGLSPSPCSRRVKSLEEAGYIAGYATLLSAEHFDLALTAYIQVRL
EKHSTEILEAFEVKVSSYDEVQECCLLTGSDADYQLKVLVRDMKHFKIFLLDKLTTNDHIAGVRSSFVLKQVKNQTSIPL
PI
>Mature_162_residues
MEASMAELQLDKIDLHILKLMQLHGKLSNQELAEKVGLSPSPCSRRVKSLEEAGYIAGYATLLSAEHFDLALTAYIQVRL
EKHSTEILEAFEVKVSSYDEVQECCLLTGSDADYQLKVLVRDMKHFKIFLLDKLTTNDHIAGVRSSFVLKQVKNQTSIPL
PI

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=36.9127516778523, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=37.0860927152318, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18204; Mature: 18204

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEASMAELQLDKIDLHILKLMQLHGKLSNQELAEKVGLSPSPCSRRVKSLEEAGYIAGYA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH
TLLSAEHFDLALTAYIQVRLEKHSTEILEAFEVKVSSYDEVQECCLLTGSDADYQLKVLV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCEEHHHHH
RDMKHFKIFLLDKLTTNDHIAGVRSSFVLKQVKNQTSIPLPI
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEASMAELQLDKIDLHILKLMQLHGKLSNQELAEKVGLSPSPCSRRVKSLEEAGYIAGYA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH
TLLSAEHFDLALTAYIQVRLEKHSTEILEAFEVKVSSYDEVQECCLLTGSDADYQLKVLV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCEEHHHHH
RDMKHFKIFLLDKLTTNDHIAGVRSSFVLKQVKNQTSIPLPI
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]