| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ilvC [H]
Identifier: 157960173
GI number: 157960173
Start: 389278
End: 390759
Strand: Direct
Name: ilvC [H]
Synonym: Spea_0344
Alternate gene names: 157960173
Gene position: 389278-390759 (Clockwise)
Preceding gene: 157960171
Following gene: 157960174
Centisome position: 7.52
GC content: 48.72
Gene sequence:
>1482_bases ATGGCTAACTATTTTAACTCTCTGAATTTGCGTCAACAATTGGAACAGCTGGCTCAATGCCGCTTCATGGATCGTAGCGA GTTCAGCGAAGGCTGCAACTTCATTAAAGGCTGGAACATCGTCATTCTTGGCTGTGGCGCTCAAGGCCTTAACCAAGGCT TGAATATGCGTGACTCAGGTCTAAATATCTCTTTCGCATTGCGTGAACAGGCGATTAGCGAAAAACGTGATTCGTACCAG AAAGCAACCGGTAACGGTTTCCGCGTTGGCACTATCGAAGAGCTTATCCCAGATGCGGATCTCGTGCTTAACCTAACGCC AGACAAGCAACACACTAATGCTGTTAACACGGTTATGCCGTTAATGAAGCAAGGTGCAACGCTGTCTTACTCGCACGGTT TCAATATCGTTGAAGAGGGCATGCAAGTTCGCCCAGATATCACGGTTATCATGGTAGCGCCTAAGTGTCCGGGTACTGAA GTACGTGAAGAGTACAAGCGTGGTTTCGGCGTGCCGACACTGATCGCGGTTCACCCAGAGAATGACCCTAAGGGTGACGG TTTCGATATCGCTAAGGCTTACGCAAGTGCTACCGGTGGCGATCGCGCTGGTGTATTGCATTCATCTTTCATTGCCGAAG TGAAGTCAGATCTAATGGGCGAGCAGACTATCCTTTGCGGCATGCTGCAAACGGGTGCGATCCTAGGTTACGAGAAGCTA GTAGCCGACGGTGTTGAGCCAGGTTACGCGGCTAAGCTCATTCAGCAAGGCTGGGAGACAACGACTGAAGCACTGAAGCA TGGCGGCATCACTCATATGATGGATCGACTATCAAACCCTGCCAAGATCAAAGCATTTGATATGGCTGAAGAGTTGAAAG TTATCCTTAAGCCACTGTTTGAAAAGCATATGGACGACATCATAGGTGGTGAGTTCTCTAAGACCATGATGGCCGATTGG GCTAACGATGACGCGAATCTACTTAAGTGGCGCAGCGAAACTAACGACACGGGTTTTGAAAATGCACCGGGTTGTGAAGA GCATATCGACGAGCAAGCTTATTTCGATAAAGGCATCTTCTTAGTGGCAATGATCAAGGCCGGTGTTGAGCTTGCTTTCG ATACCATGGTTGCCGCTGGCATCATCGAAGAGTCGGCTTACTACGAGTCACTGCATGAGACGCCACTTATCGCTAACACC ATTGCACGTAAGCGTTTGTACGAGATGAACGTGGTGATTTCTGATACCGCAGAATACGGCTGTTACCTATTCAACCATGC GGCGCTGCCACTACTGAAAGATTACGTGGCGAACATGTCTGCAGAGTACCTAGGCGGTGGCTTACAAGATGCCAGCAACG GTGTCGATAACGTACGTTTAATCGAGGTTAACGCAGCAATTCGTGGTACTGCAGTTGAAGAAATTGGTGCAGAGCTACGT GGCTACATGACAGAAATGAAGCGTATCGTAGAAGAGAAGTAA
Upstream 100 bases:
>100_bases ATTTTAAGCAATGAAAAGCTTGCGCTATAGTGATTACATCACAGCGTGACTCGAGCAAGAGTCAGCCTTATAACAATCCA GAATCAAGGTGGTATATCAG
Downstream 100 bases:
>100_bases TTTTGCTTCTATTTTAGTCGGGTCTAAACAGGTTTTTGTTTAGACCTAGGCTAGATGATTTGGAACTTGAGAGCGTCACG ATTTTAGATAACTCATTAAC
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MANYFNSLNLRQQLEQLAQCRFMDRSEFSEGCNFIKGWNIVILGCGAQGLNQGLNMRDSGLNISFALREQAISEKRDSYQ KATGNGFRVGTIEELIPDADLVLNLTPDKQHTNAVNTVMPLMKQGATLSYSHGFNIVEEGMQVRPDITVIMVAPKCPGTE VREEYKRGFGVPTLIAVHPENDPKGDGFDIAKAYASATGGDRAGVLHSSFIAEVKSDLMGEQTILCGMLQTGAILGYEKL VADGVEPGYAAKLIQQGWETTTEALKHGGITHMMDRLSNPAKIKAFDMAEELKVILKPLFEKHMDDIIGGEFSKTMMADW ANDDANLLKWRSETNDTGFENAPGCEEHIDEQAYFDKGIFLVAMIKAGVELAFDTMVAAGIIEESAYYESLHETPLIANT IARKRLYEMNVVISDTAEYGCYLFNHAALPLLKDYVANMSAEYLGGGLQDASNGVDNVRLIEVNAAIRGTAVEEIGAELR GYMTEMKRIVEEK
Sequences:
>Translated_493_residues MANYFNSLNLRQQLEQLAQCRFMDRSEFSEGCNFIKGWNIVILGCGAQGLNQGLNMRDSGLNISFALREQAISEKRDSYQ KATGNGFRVGTIEELIPDADLVLNLTPDKQHTNAVNTVMPLMKQGATLSYSHGFNIVEEGMQVRPDITVIMVAPKCPGTE VREEYKRGFGVPTLIAVHPENDPKGDGFDIAKAYASATGGDRAGVLHSSFIAEVKSDLMGEQTILCGMLQTGAILGYEKL VADGVEPGYAAKLIQQGWETTTEALKHGGITHMMDRLSNPAKIKAFDMAEELKVILKPLFEKHMDDIIGGEFSKTMMADW ANDDANLLKWRSETNDTGFENAPGCEEHIDEQAYFDKGIFLVAMIKAGVELAFDTMVAAGIIEESAYYESLHETPLIANT IARKRLYEMNVVISDTAEYGCYLFNHAALPLLKDYVANMSAEYLGGGLQDASNGVDNVRLIEVNAAIRGTAVEEIGAELR GYMTEMKRIVEEK >Mature_492_residues ANYFNSLNLRQQLEQLAQCRFMDRSEFSEGCNFIKGWNIVILGCGAQGLNQGLNMRDSGLNISFALREQAISEKRDSYQK ATGNGFRVGTIEELIPDADLVLNLTPDKQHTNAVNTVMPLMKQGATLSYSHGFNIVEEGMQVRPDITVIMVAPKCPGTEV REEYKRGFGVPTLIAVHPENDPKGDGFDIAKAYASATGGDRAGVLHSSFIAEVKSDLMGEQTILCGMLQTGAILGYEKLV ADGVEPGYAAKLIQQGWETTTEALKHGGITHMMDRLSNPAKIKAFDMAEELKVILKPLFEKHMDDIIGGEFSKTMMADWA NDDANLLKWRSETNDTGFENAPGCEEHIDEQAYFDKGIFLVAMIKAGVELAFDTMVAAGIIEESAYYESLHETPLIANTI ARKRLYEMNVVISDTAEYGCYLFNHAALPLLKDYVANMSAEYLGGGLQDASNGVDNVRLIEVNAAIRGTAVEEIGAELRG YMTEMKRIVEEK
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=489, Percent_Identity=71.3701431492842, Blast_Score=721, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323387, Length=269, Percent_Identity=30.8550185873606, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - InterPro: IPR014359 - InterPro: IPR016040 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 54259; Mature: 54128
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYFNSLNLRQQLEQLAQCRFMDRSEFSEGCNFIKGWNIVILGCGAQGLNQGLNMRDSG CCCCHHCCCHHHHHHHHHHHHCCCHHHHHHCCCEECCCCEEEEECCCHHHHCCCCCCCCC LNISFALREQAISEKRDSYQKATGNGFRVGTIEELIPDADLVLNLTPDKQHTNAVNTVMP CCEEHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCEEEEECCCCHHHHHHHHHHH LMKQGATLSYSHGFNIVEEGMQVRPDITVIMVAPKCPGTEVREEYKRGFGVPTLIAVHPE HHHCCCEEEECCCCHHHHCCCEECCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCC NDPKGDGFDIAKAYASATGGDRAGVLHSSFIAEVKSDLMGEQTILCGMLQTGAILGYEKL CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHH VADGVEPGYAAKLIQQGWETTTEALKHGGITHMMDRLSNPAKIKAFDMAEELKVILKPLF HHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH EKHMDDIIGGEFSKTMMADWANDDANLLKWRSETNDTGFENAPGCEEHIDEQAYFDKGIF HHHHHHHHCCCHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHH LVAMIKAGVELAFDTMVAAGIIEESAYYESLHETPLIANTIARKRLYEMNVVISDTAEYG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCHHHH CYLFNHAALPLLKDYVANMSAEYLGGGLQDASNGVDNVRLIEVNAAIRGTAVEEIGAELR HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHH GYMTEMKRIVEEK HHHHHHHHHHHCC >Mature Secondary Structure ANYFNSLNLRQQLEQLAQCRFMDRSEFSEGCNFIKGWNIVILGCGAQGLNQGLNMRDSG CCCHHCCCHHHHHHHHHHHHCCCHHHHHHCCCEECCCCEEEEECCCHHHHCCCCCCCCC LNISFALREQAISEKRDSYQKATGNGFRVGTIEELIPDADLVLNLTPDKQHTNAVNTVMP CCEEHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCEEEEECCCCHHHHHHHHHHH LMKQGATLSYSHGFNIVEEGMQVRPDITVIMVAPKCPGTEVREEYKRGFGVPTLIAVHPE HHHCCCEEEECCCCHHHHCCCEECCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCC NDPKGDGFDIAKAYASATGGDRAGVLHSSFIAEVKSDLMGEQTILCGMLQTGAILGYEKL CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHH VADGVEPGYAAKLIQQGWETTTEALKHGGITHMMDRLSNPAKIKAFDMAEELKVILKPLF HHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH EKHMDDIIGGEFSKTMMADWANDDANLLKWRSETNDTGFENAPGCEEHIDEQAYFDKGIF HHHHHHHHCCCHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHH LVAMIKAGVELAFDTMVAAGIIEESAYYESLHETPLIANTIARKRLYEMNVVISDTAEYG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCHHHH CYLFNHAALPLLKDYVANMSAEYLGGGLQDASNGVDNVRLIEVNAAIRGTAVEEIGAELR HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHH GYMTEMKRIVEEK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA