| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960152
Identifier: 157960152
GI number: 157960152
Start: 361966
End: 363105
Strand: Reverse
Name: 157960152
Synonym: Spea_0323
Alternate gene names: NA
Gene position: 363105-361966 (Counterclockwise)
Preceding gene: 157960153
Following gene: 157960151
Centisome position: 7.02
GC content: 46.84
Gene sequence:
>1140_bases ATGAAAAAAACCACTAAGTTTATGTTGTCAATGGTGGCTACAGCTATCGCACTTTCGAGTTCTGCTGCTTATGCAACGGA ACAGACTGAAGATGGTATCAAACTCGGCGGCGCCGTACGTGTTAACTACGCCTACCGCGACTATGATGAAGTCAACAAAG ATAAAGGCGGTGACTTTTACTTTGATATGGCAGCAATCAAGTTTGATGGTAAGCACGGTGACTGGGGCCTATCTGCTGAA TACCGTTTCACTTCTGGCACTGACTACATCAAATACGGTTTCGCGTACTACGACGTCAATCCAGATTGGCAGCTACAGCT TGGTATCAACAAGGTACCATTTGGTAATCGCGACTTCATCTCAAACAGTTACTGGTTTGGCATTCCTTATTACTTAGGTT TTGAAGATGATCATGACACAGGTATCAAGGCCGTTTACGAGAAAAACGGCTGGCACACTGACTTAGCCTTTTATAAGAGC GCCGAGTATGGTCCATCTGAGAACAAGCGTTATTCGACTGACCTATACAGCGGTACTATCGCTGCAAGCGGTATCGAGTA CTTCAACGAAGAGACTAATCAGTTCAACCTGCGCCAAACTTACACCGCCGAGCATGAAGGTGGTCAAACAACGCTTGGTG GTTCGGTACAATATGGTCAGATCTATAACAGCGATACCGGTAACAACGGCGATCGTTACGCCGTCGCACTTCACTTAGAT AGCAGCTACAAAGGCTGGAATCTGCAGCTTCAGGCGATGCAGTACGAATATGATGCCGCTGACGCTGTTGATGCCAACAA AATTGCCGTATCGGTTGTCAGCTGGCAGTACGAAATTGCTTCTAAGGGTCAATCTTATAGCGCGAACATCGCCAAGACAT TCGCAACCGACTGGGGCAGTGTGAAGTGCTATAACGACTTCGGCCTGATGACGCCTGATGTTGATGACGATAGCTATGAC AACAGCATGCAAAACGTGACGGGTTGTGCGATTTCAGCTGGCCCAACGTACACCATGGTCGATTTCGTTATGGGTAAGAA CATGACCTTCTCTACCGCTAACAATGACCACGTGGGTCTTCCTGAAATGGGCGATAGCTGGGATAAGCGCGTTAATATTA ACTTTGGTTACTACTTCTAA
Upstream 100 bases:
>100_bases AGAAAGCACCAGTTTGTACAGAGTGCCACCGCACTTGGTTTGAAGAGATGTAACGTGACTGATTAATTTATAAATCTAAA AATAGTAATAGGGAATGATG
Downstream 100 bases:
>100_bases TAACGGCTGAGTTTTCAGTTGTTATGTTAGCAATTATCAATGATCCGAGCACAGGAACGCGCAGAGGTCATTGGTAAGTC TAATGTTGTTAACTGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKKTTKFMLSMVATAIALSSSAAYATEQTEDGIKLGGAVRVNYAYRDYDEVNKDKGGDFYFDMAAIKFDGKHGDWGLSAE YRFTSGTDYIKYGFAYYDVNPDWQLQLGINKVPFGNRDFISNSYWFGIPYYLGFEDDHDTGIKAVYEKNGWHTDLAFYKS AEYGPSENKRYSTDLYSGTIAASGIEYFNEETNQFNLRQTYTAEHEGGQTTLGGSVQYGQIYNSDTGNNGDRYAVALHLD SSYKGWNLQLQAMQYEYDAADAVDANKIAVSVVSWQYEIASKGQSYSANIAKTFATDWGSVKCYNDFGLMTPDVDDDSYD NSMQNVTGCAISAGPTYTMVDFVMGKNMTFSTANNDHVGLPEMGDSWDKRVNINFGYYF
Sequences:
>Translated_379_residues MKKTTKFMLSMVATAIALSSSAAYATEQTEDGIKLGGAVRVNYAYRDYDEVNKDKGGDFYFDMAAIKFDGKHGDWGLSAE YRFTSGTDYIKYGFAYYDVNPDWQLQLGINKVPFGNRDFISNSYWFGIPYYLGFEDDHDTGIKAVYEKNGWHTDLAFYKS AEYGPSENKRYSTDLYSGTIAASGIEYFNEETNQFNLRQTYTAEHEGGQTTLGGSVQYGQIYNSDTGNNGDRYAVALHLD SSYKGWNLQLQAMQYEYDAADAVDANKIAVSVVSWQYEIASKGQSYSANIAKTFATDWGSVKCYNDFGLMTPDVDDDSYD NSMQNVTGCAISAGPTYTMVDFVMGKNMTFSTANNDHVGLPEMGDSWDKRVNINFGYYF >Mature_379_residues MKKTTKFMLSMVATAIALSSSAAYATEQTEDGIKLGGAVRVNYAYRDYDEVNKDKGGDFYFDMAAIKFDGKHGDWGLSAE YRFTSGTDYIKYGFAYYDVNPDWQLQLGINKVPFGNRDFISNSYWFGIPYYLGFEDDHDTGIKAVYEKNGWHTDLAFYKS AEYGPSENKRYSTDLYSGTIAASGIEYFNEETNQFNLRQTYTAEHEGGQTTLGGSVQYGQIYNSDTGNNGDRYAVALHLD SSYKGWNLQLQAMQYEYDAADAVDANKIAVSVVSWQYEIASKGQSYSANIAKTFATDWGSVKCYNDFGLMTPDVDDDSYD NSMQNVTGCAISAGPTYTMVDFVMGKNMTFSTANNDHVGLPEMGDSWDKRVNINFGYYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42490; Mature: 42490
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTTKFMLSMVATAIALSSSAAYATEQTEDGIKLGGAVRVNYAYRDYDEVNKDKGGDFY CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCEEEEEEEECCHHHHCCCCCCCEE FDMAAIKFDGKHGDWGLSAEYRFTSGTDYIKYGFAYYDVNPDWQLQLGINKVPFGNRDFI EEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCEECCCCCCCCC SNSYWFGIPYYLGFEDDHDTGIKAVYEKNGWHTDLAFYKSAEYGPSENKRYSTDLYSGTI CCCEEEECCEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCCCCEE AASGIEYFNEETNQFNLRQTYTAEHEGGQTTLGGSVQYGQIYNSDTGNNGDRYAVALHLD ECCCHHHHCCCCCEEEEEEEEEECCCCCCEEECCCEEECEEECCCCCCCCCEEEEEEEEC SSYKGWNLQLQAMQYEYDAADAVDANKIAVSVVSWQYEIASKGQSYSANIAKTFATDWGS CCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHEECCCCCC VKCYNDFGLMTPDVDDDSYDNSMQNVTGCAISAGPTYTMVDFVMGKNMTFSTANNDHVGL EEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCEEEEEHHHCCCEEEECCCCCCCCC PEMGDSWDKRVNINFGYYF CCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MKKTTKFMLSMVATAIALSSSAAYATEQTEDGIKLGGAVRVNYAYRDYDEVNKDKGGDFY CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCEEEEEEEECCHHHHCCCCCCCEE FDMAAIKFDGKHGDWGLSAEYRFTSGTDYIKYGFAYYDVNPDWQLQLGINKVPFGNRDFI EEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCEECCCCCCCCC SNSYWFGIPYYLGFEDDHDTGIKAVYEKNGWHTDLAFYKSAEYGPSENKRYSTDLYSGTI CCCEEEECCEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCCCCEE AASGIEYFNEETNQFNLRQTYTAEHEGGQTTLGGSVQYGQIYNSDTGNNGDRYAVALHLD ECCCHHHHCCCCCEEEEEEEEEECCCCCCEEECCCEEECEEECCCCCCCCCEEEEEEEEC SSYKGWNLQLQAMQYEYDAADAVDANKIAVSVVSWQYEIASKGQSYSANIAKTFATDWGS CCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHEECCCCCC VKCYNDFGLMTPDVDDDSYDNSMQNVTGCAISAGPTYTMVDFVMGKNMTFSTANNDHVGL EEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCEEEEEHHHCCCEEEECCCCCCCCC PEMGDSWDKRVNINFGYYF CCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA