| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960153
Identifier: 157960153
GI number: 157960153
Start: 363153
End: 363521
Strand: Reverse
Name: 157960153
Synonym: Spea_0324
Alternate gene names: NA
Gene position: 363521-363153 (Counterclockwise)
Preceding gene: 157960154
Following gene: 157960152
Centisome position: 7.03
GC content: 49.32
Gene sequence:
>369_bases ATGAACAAGTTATTACTAAGTGCACTACTCGGCCTCGCTCTGTCTAGCAACGTCATGGCGGGCGAGCTAGTCAAGATGAA AGGTAAGACTGAAGGTCGCGTAAACCACGAGTTTATCTACCAAGATGGCTGCCAAACTTGTCACCAAGGTTCAGGTAAGA AGAACACAACTGACGCAGCATGCGTTGAGTGTCATGGCGACATCAACAGTATTCCTGTCGATGAAAGCAAGCTGGCGATC CCAGAAGCACATCCACATAAGTCGCTGCACTACAACCAAGGCGCAAGCTGCCTAGCATGTCACGCTGAGCACGAGAAGAA AGCACCAGTTTGTACAGAGTGCCACCGCACTTGGTTTGAAGAGATGTAA
Upstream 100 bases:
>100_bases ACGGTGAAGCACGCTTGAGTTCGACCTCATGCCTAGAGTGCCTCGTCATGGGGATCATCGTATCTGAAACCATCAAAGCC GACCTTGAAGGAGCCGTCTA
Downstream 100 bases:
>100_bases CGTGACTGATTAATTTATAAATCTAAAAATAGTAATAGGGAATGATGATGAAAAAAACCACTAAGTTTATGTTGTCAATG GTGGCTACAGCTATCGCACT
Product: tetraheme cytochrome c
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MNKLLLSALLGLALSSNVMAGELVKMKGKTEGRVNHEFIYQDGCQTCHQGSGKKNTTDAACVECHGDINSIPVDESKLAI PEAHPHKSLHYNQGASCLACHAEHEKKAPVCTECHRTWFEEM
Sequences:
>Translated_122_residues MNKLLLSALLGLALSSNVMAGELVKMKGKTEGRVNHEFIYQDGCQTCHQGSGKKNTTDAACVECHGDINSIPVDESKLAI PEAHPHKSLHYNQGASCLACHAEHEKKAPVCTECHRTWFEEM >Mature_122_residues MNKLLLSALLGLALSSNVMAGELVKMKGKTEGRVNHEFIYQDGCQTCHQGSGKKNTTDAACVECHGDINSIPVDESKLAI PEAHPHKSLHYNQGASCLACHAEHEKKAPVCTECHRTWFEEM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13360; Mature: 13360
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLLLSALLGLALSSNVMAGELVKMKGKTEGRVNHEFIYQDGCQTCHQGSGKKNTTDAA CHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCHHEEEHHHHHHHHCCCCCCCCCCCE CVECHGDINSIPVDESKLAIPEAHPHKSLHYNQGASCLACHAEHEKKAPVCTECHRTWFE EEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHH EM CC >Mature Secondary Structure MNKLLLSALLGLALSSNVMAGELVKMKGKTEGRVNHEFIYQDGCQTCHQGSGKKNTTDAA CHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCHHEEEHHHHHHHHCCCCCCCCCCCE CVECHGDINSIPVDESKLAIPEAHPHKSLHYNQGASCLACHAEHEKKAPVCTECHRTWFE EEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHH EM CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA