| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960146
Identifier: 157960146
GI number: 157960146
Start: 355250
End: 356146
Strand: Direct
Name: 157960146
Synonym: Spea_0317
Alternate gene names: NA
Gene position: 355250-356146 (Clockwise)
Preceding gene: 157960145
Following gene: 157960147
Centisome position: 6.87
GC content: 47.71
Gene sequence:
>897_bases ATGCTTAAAATTACTTCTATTTTGACAGCACTATTAGTGCTGTTTTTTATTTCTCCGGCTCAATCCCAATCGATCGAGCG AGAGCCGCAACAAGCACGTTACGACAGAACGTTTCCAATCTGGGCTCAAGAAGCGATCGATTTGGGCCACGAGCTCCCCA AGCCTTATGGCTTTTCAGTCAATTATATGACCATGGATCAACCTTTAGTTGTCGACTCCGTCGGTTTTTCAGGTCTTCCC GCAGGGCTAGATGACATATTGAGCATCAAGGGCAGTGAAGCGGTACAGGACTCAGAGACTCTAACATTGAGAGGCGATAT GTGGGTACTGCCCTTCTTAAACCTTTACGGTGTTATTGGTCACACCAAGGGCAGCAGCGTTGCCAACGTACAGCTTGAGG CTGACTTAACCGAGGTCTTGCCGCCAATATATTGCAAATTTAATCCTTGTAGTGCCACCAGTCCTGCATTCGACTTTGTA TTGGACTTTAAGGGCACCACCTATGGTGTGGGCGGCACCTTAGTTGGCGGTATCGACAATTGGTTTGCCTTACTCGATGT CAATTACACCAATACCCGCTTGAACATTCTCGATGGTGAGATCAGCTCTATTGTGGTGTCTCCGCGTGCAGGCTACCGCA CCAGCTACAACAACCACGATATTCAAATCTGGGTTGGCGCCATGTATCAAAACGTAGAGCAGACCTTCAGTGGTTACTTG CGTGATATCGGCTTCCCTCTTGGTGATGCCAAGTTTGAGGTTAACCAGCACCTCGAAGATAAATGGAATGGCTTGATTGG TAGTCAGGTGGGATTGACCAAGAATGTGGATCTGCTGATGGAGTTTGGTGTTGGCACCCGTAGCAGCTTCATGATGAGCC TAGGTTACCGTTTTTAA
Upstream 100 bases:
>100_bases TAACCTAAGTTATTTATCTTCTGTCAACGTGTTCAGCGATAAACTCCCTTTAATATGTGACATCAAATATTTTATTTTCA GGTAAAGGTTCAATCTATAC
Downstream 100 bases:
>100_bases ATGACGTTGGAGGTGAACGTGCGCCATATCTCTCTATTGCTAGTGACGCTATTTATGACGGCATGTTCTGCCGTGGATAT TGTCGATTCTCGCGAGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MLKITSILTALLVLFFISPAQSQSIEREPQQARYDRTFPIWAQEAIDLGHELPKPYGFSVNYMTMDQPLVVDSVGFSGLP AGLDDILSIKGSEAVQDSETLTLRGDMWVLPFLNLYGVIGHTKGSSVANVQLEADLTEVLPPIYCKFNPCSATSPAFDFV LDFKGTTYGVGGTLVGGIDNWFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTSYNNHDIQIWVGAMYQNVEQTFSGYL RDIGFPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNVDLLMEFGVGTRSSFMMSLGYRF
Sequences:
>Translated_298_residues MLKITSILTALLVLFFISPAQSQSIEREPQQARYDRTFPIWAQEAIDLGHELPKPYGFSVNYMTMDQPLVVDSVGFSGLP AGLDDILSIKGSEAVQDSETLTLRGDMWVLPFLNLYGVIGHTKGSSVANVQLEADLTEVLPPIYCKFNPCSATSPAFDFV LDFKGTTYGVGGTLVGGIDNWFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTSYNNHDIQIWVGAMYQNVEQTFSGYL RDIGFPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNVDLLMEFGVGTRSSFMMSLGYRF >Mature_298_residues MLKITSILTALLVLFFISPAQSQSIEREPQQARYDRTFPIWAQEAIDLGHELPKPYGFSVNYMTMDQPLVVDSVGFSGLP AGLDDILSIKGSEAVQDSETLTLRGDMWVLPFLNLYGVIGHTKGSSVANVQLEADLTEVLPPIYCKFNPCSATSPAFDFV LDFKGTTYGVGGTLVGGIDNWFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTSYNNHDIQIWVGAMYQNVEQTFSGYL RDIGFPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNVDLLMEFGVGTRSSFMMSLGYRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32955; Mature: 32955
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKITSILTALLVLFFISPAQSQSIEREPQQARYDRTFPIWAQEAIDLGHELPKPYGFSV CEEHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEE NYMTMDQPLVVDSVGFSGLPAGLDDILSIKGSEAVQDSETLTLRGDMWVLPFLNLYGVIG EEEECCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCEEEEHHHHHHHHHC HTKGSSVANVQLEADLTEVLPPIYCKFNPCSATSPAFDFVLDFKGTTYGVGGTLVGGIDN CCCCCCEEEEEEECCHHHCCCCEEEECCCCCCCCCCEEEEEECCCCEEECCCEEECCCCC WFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTSYNNHDIQIWVGAMYQNVEQTFSGYL EEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH RDIGFPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNVDLLMEFGVGTRSSFMMSLGYRF HHHCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHCCCCC >Mature Secondary Structure MLKITSILTALLVLFFISPAQSQSIEREPQQARYDRTFPIWAQEAIDLGHELPKPYGFSV CEEHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEE NYMTMDQPLVVDSVGFSGLPAGLDDILSIKGSEAVQDSETLTLRGDMWVLPFLNLYGVIG EEEECCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCEEEEHHHHHHHHHC HTKGSSVANVQLEADLTEVLPPIYCKFNPCSATSPAFDFVLDFKGTTYGVGGTLVGGIDN CCCCCCEEEEEEECCHHHCCCCEEEECCCCCCCCCCEEEEEECCCCEEECCCEEECCCCC WFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTSYNNHDIQIWVGAMYQNVEQTFSGYL EEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH RDIGFPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNVDLLMEFGVGTRSSFMMSLGYRF HHHCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA