Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157960145

Identifier: 157960145

GI number: 157960145

Start: 353631

End: 354974

Strand: Direct

Name: 157960145

Synonym: Spea_0316

Alternate gene names: NA

Gene position: 353631-354974 (Clockwise)

Preceding gene: 157960143

Following gene: 157960146

Centisome position: 6.83

GC content: 47.69

Gene sequence:

>1344_bases
ATGGAATTGGTCTTTGTTCATGGATGGAGTGTAACCCATACAGACACTTATGCTCAGCTGCCACAGGCTTTAGTTAAGCT
GCTGGGAGATGAGTTAAATCTGACTATCCGTCATATTCACCTCGGCCGATATATCAGCTTCGATGATGCGGTTCGCCTGA
GTGATATCGCCAAAGCCTTTAATGATGCACATCTTGAGCTACTCGGTAAAAAACCATTTGCGGTGATCACCCACTCTACT
GGTGCAGCGGTTATTCGTCATTGGCTGCAAACCTTTTTTACTGGCGATAAGCTTTCCCGTTGTCCACTAACCCACTTGAT
CATGCTTGCTCCAGCTAATCACGGCTCGGCCTTAGCCCAGCTAGGAAAGTCACGAGTGGGCCGCATCAAGAGCTTTTTTG
CCGGGGTAGAGCCCGGACAGGGGATCTTGGATTGGCTAGAGCTCGGCAGTGATGGTCAATATGATTTGAATCGATATTGG
CTGGACAATTTCAGCCTCGATGGTCCCTTGCCATTCGTGCTAACGGGTGAGGCTATCGACAGTCAGTTTTATGATTACCT
GAATAGCTATACCGCTGAAGCTGGCTCAGATGGGGTGGTACGGGTAGCGTCGGCGAACCTTAACTTTTCATACCTGTTGT
TAGCCGAAACTGCGCACACTTGCGATGGCTTCGATAAACGCTGTATCTCAACGCTCAAGTTGAGCAAACATTCCCAGCCG
CATCAACAAACCGCCTTCGAAGTGATAAAAAATGCCAGCCACAGTGGCAGCAGTAAAGGCATTATGGGCTCAGTCACTAA
CCGTAACGCAAAAAATAAACCTGTGGTACAGCGTATCGCTCAATGTTTGAGGGTGACTAGCCCTAAACAATATCGGCAGC
TTTCTGATGAAATGAGTCAAGCAAGCTCAATTAAGCGTAAACCTAGGGCTTGCATGTTGGTAGTGAGAGTGACCGATGAT
ACCGGGCTGCCAGTAGAGGATTTCGATATATTGTTACTCTCTGGCCCTCACTTCGTTCCCGGTGAGTTTAAGAAAGGTTT
TATGCTCGACAAGCAGAAAAATCATACCAATAAGCATGTGCTGACCTTCTACTTTGATGCCGATAAGCTCGCTAAGGTGA
GCGAGGGTAAAATCGGCATCCGGGTCGAGCCTAGGCCGAATAGTGGCATGTGTTATTACCTTAGCGCTGAATTTCGCTCC
GATGTCGAACAGGTTCATGAGTTACTGATAGCTGACCAAACCACCATGGTGGACATTGTTTTACAGCGGCGGATTAAGCC
AGAGACTTTTAGCTTTATAGCGCCTAAAGATGGCGGCGACTTCTCATACTTAATCGATGAGTAA

Upstream 100 bases:

>100_bases
TGATAAGCTATTGAAAATTATTAATTAGATAATTTGTACTATATAAATAAGTCGAACAGGCTTGTCATCTAATGGCAAGT
TATTCGTCGTCGAGGTCACA

Downstream 100 bases:

>100_bases
GTCGATGATCAAGCGCTGCTTGGCTAAATATTTTTGGAAAGTTTTCTTGAACAGGCTTTCTGATTAGTTTTTAGTTGGTT
ATCAAGTTATGATCTATTTT

Product: phospholipase

Products: NA

Alternate protein names: PlaB Phospholipase

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAFNDAHLELLGKKPFAVITHST
GAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQLGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYW
LDNFSLDGPLPFVLTGEAIDSQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP
HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQASSIKRKPRACMLVVRVTDD
TGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHVLTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRS
DVEQVHELLIADQTTMVDIVLQRRIKPETFSFIAPKDGGDFSYLIDE

Sequences:

>Translated_447_residues
MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAFNDAHLELLGKKPFAVITHST
GAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQLGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYW
LDNFSLDGPLPFVLTGEAIDSQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP
HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQASSIKRKPRACMLVVRVTDD
TGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHVLTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRS
DVEQVHELLIADQTTMVDIVLQRRIKPETFSFIAPKDGGDFSYLIDE
>Mature_447_residues
MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAFNDAHLELLGKKPFAVITHST
GAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQLGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYW
LDNFSLDGPLPFVLTGEAIDSQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP
HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQASSIKRKPRACMLVVRVTDD
TGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHVLTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRS
DVEQVHELLIADQTTMVDIVLQRRIKPETFSFIAPKDGGDFSYLIDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49867; Mature: 49867

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAF
CEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCEECCCCCHHHHHHHHHH
NDAHLELLGKKPFAVITHSTGAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQ
CCHHHEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHH
LGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYWLDNFSLDGPLPFVLTGEAID
HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECHHHH
SQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP
HHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCHHCCCHHHHHHHHHHHHCCCCC
HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQ
HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ASSIKRKPRACMLVVRVTDDTGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHV
HHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
LTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRSDVEQVHELLIADQTTMVDIV
EEEEECCHHHHHCCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHH
LQRRIKPETFSFIAPKDGGDFSYLIDE
HHHCCCCCCEEEEECCCCCCEEEEECC
>Mature Secondary Structure
MELVFVHGWSVTHTDTYAQLPQALVKLLGDELNLTIRHIHLGRYISFDDAVRLSDIAKAF
CEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEECCEECCCCCHHHHHHHHHH
NDAHLELLGKKPFAVITHSTGAAVIRHWLQTFFTGDKLSRCPLTHLIMLAPANHGSALAQ
CCHHHEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHH
LGKSRVGRIKSFFAGVEPGQGILDWLELGSDGQYDLNRYWLDNFSLDGPLPFVLTGEAID
HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECHHHH
SQFYDYLNSYTAEAGSDGVVRVASANLNFSYLLLAETAHTCDGFDKRCISTLKLSKHSQP
HHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCHHCCCHHHHHHHHHHHHCCCCC
HQQTAFEVIKNASHSGSSKGIMGSVTNRNAKNKPVVQRIAQCLRVTSPKQYRQLSDEMSQ
HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ASSIKRKPRACMLVVRVTDDTGLPVEDFDILLLSGPHFVPGEFKKGFMLDKQKNHTNKHV
HHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
LTFYFDADKLAKVSEGKIGIRVEPRPNSGMCYYLSAEFRSDVEQVHELLIADQTTMVDIV
EEEEECCHHHHHCCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHH
LQRRIKPETFSFIAPKDGGDFSYLIDE
HHHCCCCCCEEEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA