| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960135
Identifier: 157960135
GI number: 157960135
Start: 345407
End: 346249
Strand: Direct
Name: 157960135
Synonym: Spea_0306
Alternate gene names: NA
Gene position: 345407-346249 (Clockwise)
Preceding gene: 157960134
Following gene: 157960136
Centisome position: 6.68
GC content: 48.16
Gene sequence:
>843_bases ATGAAAGAAATCGTCATTATATTGCTGATTGTATTAGGTGTTTATCTCTATATGCGCACACAAAAAGCGGCGCAAGCAGA GAAAGAGCAGGCAGCTAAGCGCGAAGAAGCAGCGCAAGAAGTGCCAGAGAGTGAGATGAAAGATATCACTCCTGAGACAA CTGAAGAGATATCGACACCTACCGTCGAAGGGGTGAGCTTTGAGCCAAAAGTTGATCAGCAAGAAGAAGTGAAGCAAGCA ACTGTTAAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAAAAGCTCAATCTGAAGCCGTTGCCGAAGTAGA GCCTGAGCTGAAAATAGCCGCAGAAGCTAAGCCTGAAGCAGAAGTTAAGCCCGAGGTAAAAGTGGAAATGCAGCCTGCTG CTGAGGCACCGTCTGCAGTCAAAACCGAGTCAGTCGTTCTGTCATGGGCTAATCCAAAACTTACCAATGCCGTTGGCGAA CTTGCGCTAGCTGGTGGCGCCCCTGCGCAGCATATCGCTATCTCTGCAGCTATCACCGAATGTTATAAGCAGCGTAAGCA AAGTGAATATGTGCAATACGGTGCAGGTCTATCTCAAGACTACCTTGAGATTTTTGCAGCTTATGTCAAAGGCCTTAAAG CTGAAAACCCTGACGCCGAAGTGAAAGGCACTGCCATGATGCATCTGTCGACCCTGCTTAATGATAATGGCGAGTTCGAT ACAGCGATTGCCATCTGCAAGACGGCAATAGAATATGGCCTGACTGATGGCACGGTTACGGGTTTTGAGGGGCGAATTAT CCGTATAGAGAAAGCTAAGGCGAAAGCCAATAATAGCTTTTAA
Upstream 100 bases:
>100_bases AGAGAGAGAATGCATTACTAATAATGTTTAAATTTTGCACATTTTAGCTGTGTGATAGTATGTATTAAATGTGTTCGCGG CTAACCCATGGTGGAAGACA
Downstream 100 bases:
>100_bases CCGCTAAAAACAATTAATCACTAACCAAGCGGTGTAGAATAAGCGTATTGGTTAGCAAAGGCGAACTCCTGACTTGCATT GGGACTTCGCCTTTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKEIVIILLIVLGVYLYMRTQKAAQAEKEQAAKREEAAQEVPESEMKDITPETTEEISTPTVEGVSFEPKVDQQEEVKQA TVKPEPEPEPEPEPEPKAQSEAVAEVEPELKIAAEAKPEAEVKPEVKVEMQPAAEAPSAVKTESVVLSWANPKLTNAVGE LALAGGAPAQHIAISAAITECYKQRKQSEYVQYGAGLSQDYLEIFAAYVKGLKAENPDAEVKGTAMMHLSTLLNDNGEFD TAIAICKTAIEYGLTDGTVTGFEGRIIRIEKAKAKANNSF
Sequences:
>Translated_280_residues MKEIVIILLIVLGVYLYMRTQKAAQAEKEQAAKREEAAQEVPESEMKDITPETTEEISTPTVEGVSFEPKVDQQEEVKQA TVKPEPEPEPEPEPEPKAQSEAVAEVEPELKIAAEAKPEAEVKPEVKVEMQPAAEAPSAVKTESVVLSWANPKLTNAVGE LALAGGAPAQHIAISAAITECYKQRKQSEYVQYGAGLSQDYLEIFAAYVKGLKAENPDAEVKGTAMMHLSTLLNDNGEFD TAIAICKTAIEYGLTDGTVTGFEGRIIRIEKAKAKANNSF >Mature_280_residues MKEIVIILLIVLGVYLYMRTQKAAQAEKEQAAKREEAAQEVPESEMKDITPETTEEISTPTVEGVSFEPKVDQQEEVKQA TVKPEPEPEPEPEPEPKAQSEAVAEVEPELKIAAEAKPEAEVKPEVKVEMQPAAEAPSAVKTESVVLSWANPKLTNAVGE LALAGGAPAQHIAISAAITECYKQRKQSEYVQYGAGLSQDYLEIFAAYVKGLKAENPDAEVKGTAMMHLSTLLNDNGEFD TAIAICKTAIEYGLTDGTVTGFEGRIIRIEKAKAKANNSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30358; Mature: 30358
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIVIILLIVLGVYLYMRTQKAAQAEKEQAAKREEAAQEVPESEMKDITPETTEEISTP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHCCCC TVEGVSFEPKVDQQEEVKQATVKPEPEPEPEPEPEPKAQSEAVAEVEPELKIAAEAKPEA CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCC EVKPEVKVEMQPAAEAPSAVKTESVVLSWANPKLTNAVGELALAGGAPAQHIAISAAITE CCCCCEEEEECCCCCCCCHHCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH CYKQRKQSEYVQYGAGLSQDYLEIFAAYVKGLKAENPDAEVKGTAMMHLSTLLNDNGEFD HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHH TAIAICKTAIEYGLTDGTVTGFEGRIIRIEKAKAKANNSF HHHHHHHHHHHHCCCCCEEECCCCEEEEEECCHHHCCCCC >Mature Secondary Structure MKEIVIILLIVLGVYLYMRTQKAAQAEKEQAAKREEAAQEVPESEMKDITPETTEEISTP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHCCCC TVEGVSFEPKVDQQEEVKQATVKPEPEPEPEPEPEPKAQSEAVAEVEPELKIAAEAKPEA CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCC EVKPEVKVEMQPAAEAPSAVKTESVVLSWANPKLTNAVGELALAGGAPAQHIAISAAITE CCCCCEEEEECCCCCCCCHHCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH CYKQRKQSEYVQYGAGLSQDYLEIFAAYVKGLKAENPDAEVKGTAMMHLSTLLNDNGEFD HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHH TAIAICKTAIEYGLTDGTVTGFEGRIIRIEKAKAKANNSF HHHHHHHHHHHHCCCCCEEECCCCEEEEEECCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA