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The map label for this gene is yjcC [C]

Identifier: 157960134

GI number: 157960134

Start: 343190

End: 345226

Strand: Direct

Name: yjcC [C]

Synonym: Spea_0305

Alternate gene names: 157960134

Gene position: 343190-345226 (Clockwise)

Preceding gene: 157960133

Following gene: 157960135

Centisome position: 6.63

GC content: 41.09

Gene sequence:

>2037_bases
ATGACGTTACGCTATATCTCTTCTAGAGTGTTAAATTGGAGTAAGGAGTCTAAGCTCTACTTATCAGACCTTGCAGCCAT
TGCCTTATTGTTGCTGCCGATAACGTTAGCAAGCTCGTTAGCTATGTTGCTAGGGCATGCATTTAGAGTACTTGAAATAG
CGAATGTCTCAGAGTTGCTTTTCTATGTCTCAGATATATTGATTAACCTATATCCAACGACATTCTGTGTTGTGGCCAGT
TATTACCTCTCACAAAAAACCAATGCCTCTAGTGCCATTTTTATTATCTATGCATTAGTGCTGTTTTATATTCTCTCCAT
AGGAAACCAAGACTTCTTGACGAGTCATACATTGCCAAATAATCCACTGCTGGCCTTATTAAGTGCAATTGTGACCTACT
TATATTACTTCTACTTTCCTGTTCGTCTTTTGGACCCTAACTCATTTGATTTTGCGTCTAGATTAATAAAGTATATTTTC
CATATTTTCTGTTTTTCAATCTTTGCATTGTTACTTTCACAGCTCGTTATATTCAGCGGTTCCTACCTCGAAAATCTTGT
TGCATCAGTTGGACTCGATCCGCTCACTTTCGTGGGAGGCTTGATATATCAAACCTTGCTTGGGATCTTGGGCGCCGTTG
GCATAAACGGACACAACATGCTGTTTGTTATCAAACAGCAAATCTATGCCGATACGCTAACGAATATTGAGGCCTGGCGC
GCCGGAGAAGCTTCAATCAATATTATTAGCCAAGGCTTCTATGACGCATTTCTGTCTATGGGGGGCTCGGGTAACTGCAT
AAGCCTGTTGCTGTGTGTGCTTATTTTTAGCCGAAATTATAACCACAGTATGCTGGCAATTGTCGCAATACCTATGGTCA
TATTTAATATCAATGAAGTGTTATTATTTGGCCTGCCGATCCTGTTTAATCCGGTTATGATCATCCCGTTTATCTTGGTG
CCACTGGCCAGCTTCGTAATCGTTTATGCCTGTATTGCGCTAGGTGTCGTATCACCGGTAGTGAGTATCGTGAACTGGCT
GACGCCGCCCATTTTCAGTGGTTACTTCGCGATGGGAGAGCAGCTGGATGGGGCGCTTTTGCAAATTGTAGTCATTACTG
TTGGCGTGTTTATCTATCGGCCTTTCTATCTTGCGTATGTTGGTAAGCACTTGGTGTCGCTTGCTCCCAATACTCGATAC
GCCGCGGCCGAAAGTTCGATTTTTAATCATGTGCTACGAAGTGTAAGAAATTCGACCAATGATAATTTTACCCAATCATC
GGCTCAAAAAAGGATGGCGCAGATTTTAAGACACGGAAATCTGGTCATGTTTTACCAAAAAATTCAGTCAATAAAGAATA
AAGAGCAATACAGTTATGAAGCACTGCTTCGCTATGTTGATGATAAGGGAAAGTTATGCTCGCCAGAATTTATTCTAGAT
TTCCAACTGCTTGAAGCTATGCCAATGCTGGATAAGTTGGTAATTGAGCTAGTATTAAGTGATATGCAGAAAATGAATTT
GCCTCTAGGAGGACGTGTTGCCATTAACATATCTGTGGCGTCCATCGAGCAAGCGGATTTCGTCGAGCACTTACTGACAC
GGCTTGAGCATTATTGTATTTCTCCGTCAAAGGTAGAAATTGAAATAACAGAAGAAGCCATGCTCAATGACAAAGTCTAC
TTAACTCAGGTAATGAAAGACCTTCAGCAAAAAAATATTGCCATCTCTATGGATGATTTTGGCTCTGGCTACGCCTCATT
TCCACATTTGCTGCAGTATCCATTTGATAAAGTCAAAATAGACAGATCATTGTTGTTAGATGCGCAATCGATCAAAGGCA
GAGAAATCTATAAATTGGTGGCTAAGTTAGGCGAAATCGCTAATTGTAAAATCGTTGCCGAGGGTGTAGAAACAAAGCAA
GAGTATGAATTTGTAGAAAATTGTGGCGTCGACTTTGTTCAAGGTTATTACTTAGCGAGGCCTTTACCGCTTGCAAGCCT
GTCCAGTGAAAATGTGGCTGACAGGTTAATATCTTAG

Upstream 100 bases:

>100_bases
CGTGATGTGTAATCCGTCATTTTAGTTGATGAAAATAATTGCAATATTTTCAAATGAAATACCCTACGCAACTTTTGCGG
AGCCTCTAAGGTTTTAAATC

Downstream 100 bases:

>100_bases
TTTATTTATGCTTTGTAACACTCAAAAAAACGATTATTTTTGATACCCGATAAAAAAAGAGATATAAATAGTTGATTTTA
AGAGAGAGAATGCATTACTA

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 677

Protein sequence:

>678_residues
MTLRYISSRVLNWSKESKLYLSDLAAIALLLLPITLASSLAMLLGHAFRVLEIANVSELLFYVSDILINLYPTTFCVVAS
YYLSQKTNASSAIFIIYALVLFYILSIGNQDFLTSHTLPNNPLLALLSAIVTYLYYFYFPVRLLDPNSFDFASRLIKYIF
HIFCFSIFALLLSQLVIFSGSYLENLVASVGLDPLTFVGGLIYQTLLGILGAVGINGHNMLFVIKQQIYADTLTNIEAWR
AGEASINIISQGFYDAFLSMGGSGNCISLLLCVLIFSRNYNHSMLAIVAIPMVIFNINEVLLFGLPILFNPVMIIPFILV
PLASFVIVYACIALGVVSPVVSIVNWLTPPIFSGYFAMGEQLDGALLQIVVITVGVFIYRPFYLAYVGKHLVSLAPNTRY
AAAESSIFNHVLRSVRNSTNDNFTQSSAQKRMAQILRHGNLVMFYQKIQSIKNKEQYSYEALLRYVDDKGKLCSPEFILD
FQLLEAMPMLDKLVIELVLSDMQKMNLPLGGRVAINISVASIEQADFVEHLLTRLEHYCISPSKVEIEITEEAMLNDKVY
LTQVMKDLQQKNIAISMDDFGSGYASFPHLLQYPFDKVKIDRSLLLDAQSIKGREIYKLVAKLGEIANCKIVAEGVETKQ
EYEFVENCGVDFVQGYYLARPLPLASLSSENVADRLIS

Sequences:

>Translated_678_residues
MTLRYISSRVLNWSKESKLYLSDLAAIALLLLPITLASSLAMLLGHAFRVLEIANVSELLFYVSDILINLYPTTFCVVAS
YYLSQKTNASSAIFIIYALVLFYILSIGNQDFLTSHTLPNNPLLALLSAIVTYLYYFYFPVRLLDPNSFDFASRLIKYIF
HIFCFSIFALLLSQLVIFSGSYLENLVASVGLDPLTFVGGLIYQTLLGILGAVGINGHNMLFVIKQQIYADTLTNIEAWR
AGEASINIISQGFYDAFLSMGGSGNCISLLLCVLIFSRNYNHSMLAIVAIPMVIFNINEVLLFGLPILFNPVMIIPFILV
PLASFVIVYACIALGVVSPVVSIVNWLTPPIFSGYFAMGEQLDGALLQIVVITVGVFIYRPFYLAYVGKHLVSLAPNTRY
AAAESSIFNHVLRSVRNSTNDNFTQSSAQKRMAQILRHGNLVMFYQKIQSIKNKEQYSYEALLRYVDDKGKLCSPEFILD
FQLLEAMPMLDKLVIELVLSDMQKMNLPLGGRVAINISVASIEQADFVEHLLTRLEHYCISPSKVEIEITEEAMLNDKVY
LTQVMKDLQQKNIAISMDDFGSGYASFPHLLQYPFDKVKIDRSLLLDAQSIKGREIYKLVAKLGEIANCKIVAEGVETKQ
EYEFVENCGVDFVQGYYLARPLPLASLSSENVADRLIS
>Mature_677_residues
TLRYISSRVLNWSKESKLYLSDLAAIALLLLPITLASSLAMLLGHAFRVLEIANVSELLFYVSDILINLYPTTFCVVASY
YLSQKTNASSAIFIIYALVLFYILSIGNQDFLTSHTLPNNPLLALLSAIVTYLYYFYFPVRLLDPNSFDFASRLIKYIFH
IFCFSIFALLLSQLVIFSGSYLENLVASVGLDPLTFVGGLIYQTLLGILGAVGINGHNMLFVIKQQIYADTLTNIEAWRA
GEASINIISQGFYDAFLSMGGSGNCISLLLCVLIFSRNYNHSMLAIVAIPMVIFNINEVLLFGLPILFNPVMIIPFILVP
LASFVIVYACIALGVVSPVVSIVNWLTPPIFSGYFAMGEQLDGALLQIVVITVGVFIYRPFYLAYVGKHLVSLAPNTRYA
AAESSIFNHVLRSVRNSTNDNFTQSSAQKRMAQILRHGNLVMFYQKIQSIKNKEQYSYEALLRYVDDKGKLCSPEFILDF
QLLEAMPMLDKLVIELVLSDMQKMNLPLGGRVAINISVASIEQADFVEHLLTRLEHYCISPSKVEIEITEEAMLNDKVYL
TQVMKDLQQKNIAISMDDFGSGYASFPHLLQYPFDKVKIDRSLLLDAQSIKGREIYKLVAKLGEIANCKIVAEGVETKQE
YEFVENCGVDFVQGYYLARPLPLASLSSENVADRLIS

Specific function: Unknown

COG id: COG1455

COG function: function code G; Phosphotransferase system cellobiose-specific component IIC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1790496, Length=244, Percent_Identity=28.6885245901639, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1788849, Length=249, Percent_Identity=30.9236947791165, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI87082096, Length=275, Percent_Identity=26.5454545454545, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1788502, Length=229, Percent_Identity=29.6943231441048, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788032, Length=148, Percent_Identity=35.1351351351351, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87081845, Length=246, Percent_Identity=27.6422764227642, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87081743, Length=240, Percent_Identity=25.4166666666667, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI87081980, Length=230, Percent_Identity=26.9565217391304, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787541, Length=237, Percent_Identity=25.7383966244726, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI226510982, Length=260, Percent_Identity=25.7692307692308, Blast_Score=87, Evalue=5e-18,
Organism=Escherichia coli, GI87081921, Length=241, Percent_Identity=24.4813278008299, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1786507, Length=168, Percent_Identity=31.547619047619, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787055, Length=252, Percent_Identity=24.6031746031746, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 75833; Mature: 75702

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS51105 PTS_EIIC_TYPE_3 ; PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRYISSRVLNWSKESKLYLSDLAAIALLLLPITLASSLAMLLGHAFRVLEIANVSELL
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYVSDILINLYPTTFCVVASYYLSQKTNASSAIFIIYALVLFYILSIGNQDFLTSHTLPN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
NPLLALLSAIVTYLYYFYFPVRLLDPNSFDFASRLIKYIFHIFCFSIFALLLSQLVIFSG
CHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYLENLVASVGLDPLTFVGGLIYQTLLGILGAVGINGHNMLFVIKQQIYADTLTNIEAWR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCHHHHC
AGEASINIISQGFYDAFLSMGGSGNCISLLLCVLIFSRNYNHSMLAIVAIPMVIFNINEV
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLFGLPILFNPVMIIPFILVPLASFVIVYACIALGVVSPVVSIVNWLTPPIFSGYFAMGE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QLDGALLQIVVITVGVFIYRPFYLAYVGKHLVSLAPNTRYAAAESSIFNHVLRSVRNSTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
DNFTQSSAQKRMAQILRHGNLVMFYQKIQSIKNKEQYSYEALLRYVDDKGKLCSPEFILD
CCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHH
FQLLEAMPMLDKLVIELVLSDMQKMNLPLGGRVAINISVASIEQADFVEHLLTRLEHYCI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCC
SPSKVEIEITEEAMLNDKVYLTQVMKDLQQKNIAISMDDFGSGYASFPHLLQYPFDKVKI
CCCEEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCHHCCHHHHHCCHHHHHH
DRSLLLDAQSIKGREIYKLVAKLGEIANCKIVAEGVETKQEYEFVENCGVDFVQGYYLAR
HHHHHHCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHCC
PLPLASLSSENVADRLIS
CCCCHHCCCCHHHHHHCC
>Mature Secondary Structure 
TLRYISSRVLNWSKESKLYLSDLAAIALLLLPITLASSLAMLLGHAFRVLEIANVSELL
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYVSDILINLYPTTFCVVASYYLSQKTNASSAIFIIYALVLFYILSIGNQDFLTSHTLPN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
NPLLALLSAIVTYLYYFYFPVRLLDPNSFDFASRLIKYIFHIFCFSIFALLLSQLVIFSG
CHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYLENLVASVGLDPLTFVGGLIYQTLLGILGAVGINGHNMLFVIKQQIYADTLTNIEAWR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCHHHHC
AGEASINIISQGFYDAFLSMGGSGNCISLLLCVLIFSRNYNHSMLAIVAIPMVIFNINEV
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLFGLPILFNPVMIIPFILVPLASFVIVYACIALGVVSPVVSIVNWLTPPIFSGYFAMGE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QLDGALLQIVVITVGVFIYRPFYLAYVGKHLVSLAPNTRYAAAESSIFNHVLRSVRNSTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
DNFTQSSAQKRMAQILRHGNLVMFYQKIQSIKNKEQYSYEALLRYVDDKGKLCSPEFILD
CCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHH
FQLLEAMPMLDKLVIELVLSDMQKMNLPLGGRVAINISVASIEQADFVEHLLTRLEHYCI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCC
SPSKVEIEITEEAMLNDKVYLTQVMKDLQQKNIAISMDDFGSGYASFPHLLQYPFDKVKI
CCCEEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCHHCCHHHHHCCHHHHHH
DRSLLLDAQSIKGREIYKLVAKLGEIANCKIVAEGVETKQEYEFVENCGVDFVQGYYLAR
HHHHHHCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHCC
PLPLASLSSENVADRLIS
CCCCHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]