| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is fepA [C]
Identifier: 157960133
GI number: 157960133
Start: 340442
End: 343084
Strand: Direct
Name: fepA [C]
Synonym: Spea_0304
Alternate gene names: 157960133
Gene position: 340442-343084 (Clockwise)
Preceding gene: 157960118
Following gene: 157960134
Centisome position: 6.58
GC content: 45.59
Gene sequence:
>2643_bases ATGATGGATATTAATAAGAAAGCCTTTTTGAAGATAACGGGCATAGGCCGAGCTGTTTTTAAGAAAAGCTTAATGACAAT CAGTATCTTGCTATTGAACTTGGTGGTGCCCGCTTTTGCTACGCCTGAGTTGGATGATGAAGTGATTACCGAGCGATCAA TTGAAAGAATTGAAGTGCGTGGGATCCGAACCTCGATGAAGGACTCCATTAATAGCAAACGATTCTCGGATGCTGTGGTC GATGCGGTTACAGCTGAAGATATAGGTAAGTTCCCAGACAGCGATGTTGGCGAGTCACTCGGACGCATTCCCGGGGTTGC GGTTAACCGTCAATTTGGTCAAGGTCAGCAGGTTTCTATTCGAGGTGCATCCAATCAGCTAACCAGTACCTTGTTAAATG GGCACTCGGTCGCATCTACCGGTTGGTTTGATCAGCAAACAACTGACCGTAGCTTTAACTACTCACTACTGCCACCCGAA ATGGTGGGGGATATTGAGGTTTATAAATCTTCACAAGCCGATATTACCGAAGGTGGGGTGGGTGGAACCGTTATTATTAA TACCCGTAAACCATTCGAGTTAGATGCCAACTCACTTTTTTTCAGTCATAAGCAAGACTATGGCAGCGTCTCAGAGGAGA TTGACCCTGAGTTTTCGGGATTATATAGCTGGAAAAATAGTGCAGAAAGTGTCGGTATCCTACTTGCTGTTGCCGATGGC AAGACGCACTACCAGCGAAATGGTATTGAATCAAACATAGGTTGGGGGGATATCGTACCAACGACATTCGAGCAACAGCG CGAGCGCACGGCGATTAACGCTGTTTTGCAATATCGCCCAACAGATAATGTAGAGCTTGGCTTCAATATGATGCATCTCG ATATGCAAGCAAACAATGCCAACACTTCGCTGTTTCTTATGTTCCCTGATGATAAGGAAGCAGCCTGTGAACAAAGGAAC CAAGCGGGTACTTGCATCTTCTACCGTCGTGACGCTAATGATGCTAATCCTGGGTGGGCGCAAACATGGGTACGCGAAGC CAGTATGGATTCAAAGACCTTTGATTTAGATTTTACTTACGAAGCGGATAACTACACCTTAGAGGGGCTAGTGGGTAACA CTAAGTCTGAAGGGGGCACCAATACGACCGCTAACTACGGTGCCTGGTTAGGTCAAGCGCGTGATTTTGCAGGTACTTAC GATGCCACCGGCGATGTGATCGACATTGACATTGCCAACCCGTCATTTGGGGTTGAAGACTTCAATGGTCCTCTTGCACC TGAAGCTTGGTCTCTGCGTAAACAACCTAATTCAGATGAAGAAACATATATTAAGTTTGATATTGATTTTCCAGTCGACT ACGGCTTCATCACGGCAATAAAAACAGGTGTCAGCTGGGCAAATCATGACGTTAAACAGGAGTCTTTCGAGGGGATAGCA AGCCCCAATGTCATCGCTAAAGATGCATCAGCCTATTACTCGGGGAGCGTTTCATCTGGTGGTGGATTTACTCTACCAAA ACCTATTCTTGATGCCATGTTAAATGATGCCAAGGCCGCGATAACGCATTTTGATCGCGACGGCCAAGTCTATAAATCTG GTTACGGTACGATTAATGAAGAAAACTTAGCCTTGTATCTTATGGCTAACTTCGCGTCTGAGCGTATTAGAGGTAATGTC GGGCTGCGCTTTATATCAACTGATGCTGAGTCTGATTTTTACCAGCTTAAACCCGATGGTTCTTACGCCGATGAGTTGAG CACCTTAACAGCAAGTTATAGCGATTTATTACCTAGTATCAACCTTGCATTTGATCTTGCTCCAGATATCATCATTCGTG CTTCGGCATCTAAGGTCATTTCTCGTCCCAATTACGATGATATGTTTTCTGCCTCTGCACTTTCAGGTTACGCCGATGGC ATTCCAGATAACGAGGTGCTTGATAGGGGGAATATTGCACTGACCCCATTTAAGGCCACTCAAGCGGATCTTGGTATTGA GTGGTATTTCGCTGCAGAAGGTTTGCTCTCTGCGACTTACTTTATTAAAGATATCGGCTCCTTCATCACTTCTGAGCAAT TATTGGATCAAAGTATAGGTATTATCGATCCTGACTCCGGTGAGGATAGCTGGACAGTATCGACCAAGAAAAATGGTTCG GGTGGTCAGATCCAAGGGCTTGAGCTACAGCTACAGAACGGCTTCGAAAATGGCCTAGGTTACGCTGTAAATTATACCTT TGCCGACTCAAACGCCCCTGCTGGTCATTACCCAGATCAAGTCAGCGTATTTTCCGACTCATCTAAACATACGGTGAACT TAGTTGGTTACTATGAAATGGATAGCTTCTCTGCTCGTCTTGCCTACAATTGGCGCAGCGAATACATGATCCGCGAATTG CCCGGCTACTATGGTAATCGTGAGCATCAAGCTTACGGCACGGTCGACTTAAGCAGTCGCTACAACATCACTGAACATCT CGCTATTTCTTTCGAGGTGGTGAACTTATTGGCAGAAGACAGTATTCAGCTGGGTGTCGCAGCTGATTCAGCAGAAGTGA AACCGGAGCTGCAGAATAACTACCCAGTATTTAGTGCTGAAGGTGAGGCGCGTTATAAACTCGGTATTACAGTCCGATTT TAA
Upstream 100 bases:
>100_bases ATTCACTCTAATCAGGAATATTGCGGGTCATTTCATTGGTTACTGCTGTGCTTAATTAGGCTTTATAGCAGATAGATACG TGATACCACTTGTAAAAATA
Downstream 100 bases:
>100_bases TATTCCGTGATGTGTAATCCGTCATTTTAGTTGATGAAAATAATTGCAATATTTTCAAATGAAATACCCTACGCAACTTT TGCGGAGCCTCTAAGGTTTT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; NB-Dependent Receptor Subfamily Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Receptor Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Receptor-Like Protein; NB-Dependent Maltose Outer Membrane Transporter MalA; NB Dependent Receptor For Iron Chelates; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB-Dependent Receptor Plug Domain; NB Dependent Receptor-Related Protein; 3-Dehydroquinate Synthase; Peptidase; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Rhodanese-Like Protein; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 880; Mature: 880
Protein sequence:
>880_residues MMDINKKAFLKITGIGRAVFKKSLMTISILLLNLVVPAFATPELDDEVITERSIERIEVRGIRTSMKDSINSKRFSDAVV DAVTAEDIGKFPDSDVGESLGRIPGVAVNRQFGQGQQVSIRGASNQLTSTLLNGHSVASTGWFDQQTTDRSFNYSLLPPE MVGDIEVYKSSQADITEGGVGGTVIINTRKPFELDANSLFFSHKQDYGSVSEEIDPEFSGLYSWKNSAESVGILLAVADG KTHYQRNGIESNIGWGDIVPTTFEQQRERTAINAVLQYRPTDNVELGFNMMHLDMQANNANTSLFLMFPDDKEAACEQRN QAGTCIFYRRDANDANPGWAQTWVREASMDSKTFDLDFTYEADNYTLEGLVGNTKSEGGTNTTANYGAWLGQARDFAGTY DATGDVIDIDIANPSFGVEDFNGPLAPEAWSLRKQPNSDEETYIKFDIDFPVDYGFITAIKTGVSWANHDVKQESFEGIA SPNVIAKDASAYYSGSVSSGGGFTLPKPILDAMLNDAKAAITHFDRDGQVYKSGYGTINEENLALYLMANFASERIRGNV GLRFISTDAESDFYQLKPDGSYADELSTLTASYSDLLPSINLAFDLAPDIIIRASASKVISRPNYDDMFSASALSGYADG IPDNEVLDRGNIALTPFKATQADLGIEWYFAAEGLLSATYFIKDIGSFITSEQLLDQSIGIIDPDSGEDSWTVSTKKNGS GGQIQGLELQLQNGFENGLGYAVNYTFADSNAPAGHYPDQVSVFSDSSKHTVNLVGYYEMDSFSARLAYNWRSEYMIREL PGYYGNREHQAYGTVDLSSRYNITEHLAISFEVVNLLAEDSIQLGVAADSAEVKPELQNNYPVFSAEGEARYKLGITVRF
Sequences:
>Translated_880_residues MMDINKKAFLKITGIGRAVFKKSLMTISILLLNLVVPAFATPELDDEVITERSIERIEVRGIRTSMKDSINSKRFSDAVV DAVTAEDIGKFPDSDVGESLGRIPGVAVNRQFGQGQQVSIRGASNQLTSTLLNGHSVASTGWFDQQTTDRSFNYSLLPPE MVGDIEVYKSSQADITEGGVGGTVIINTRKPFELDANSLFFSHKQDYGSVSEEIDPEFSGLYSWKNSAESVGILLAVADG KTHYQRNGIESNIGWGDIVPTTFEQQRERTAINAVLQYRPTDNVELGFNMMHLDMQANNANTSLFLMFPDDKEAACEQRN QAGTCIFYRRDANDANPGWAQTWVREASMDSKTFDLDFTYEADNYTLEGLVGNTKSEGGTNTTANYGAWLGQARDFAGTY DATGDVIDIDIANPSFGVEDFNGPLAPEAWSLRKQPNSDEETYIKFDIDFPVDYGFITAIKTGVSWANHDVKQESFEGIA SPNVIAKDASAYYSGSVSSGGGFTLPKPILDAMLNDAKAAITHFDRDGQVYKSGYGTINEENLALYLMANFASERIRGNV GLRFISTDAESDFYQLKPDGSYADELSTLTASYSDLLPSINLAFDLAPDIIIRASASKVISRPNYDDMFSASALSGYADG IPDNEVLDRGNIALTPFKATQADLGIEWYFAAEGLLSATYFIKDIGSFITSEQLLDQSIGIIDPDSGEDSWTVSTKKNGS GGQIQGLELQLQNGFENGLGYAVNYTFADSNAPAGHYPDQVSVFSDSSKHTVNLVGYYEMDSFSARLAYNWRSEYMIREL PGYYGNREHQAYGTVDLSSRYNITEHLAISFEVVNLLAEDSIQLGVAADSAEVKPELQNNYPVFSAEGEARYKLGITVRF >Mature_880_residues MMDINKKAFLKITGIGRAVFKKSLMTISILLLNLVVPAFATPELDDEVITERSIERIEVRGIRTSMKDSINSKRFSDAVV DAVTAEDIGKFPDSDVGESLGRIPGVAVNRQFGQGQQVSIRGASNQLTSTLLNGHSVASTGWFDQQTTDRSFNYSLLPPE MVGDIEVYKSSQADITEGGVGGTVIINTRKPFELDANSLFFSHKQDYGSVSEEIDPEFSGLYSWKNSAESVGILLAVADG KTHYQRNGIESNIGWGDIVPTTFEQQRERTAINAVLQYRPTDNVELGFNMMHLDMQANNANTSLFLMFPDDKEAACEQRN QAGTCIFYRRDANDANPGWAQTWVREASMDSKTFDLDFTYEADNYTLEGLVGNTKSEGGTNTTANYGAWLGQARDFAGTY DATGDVIDIDIANPSFGVEDFNGPLAPEAWSLRKQPNSDEETYIKFDIDFPVDYGFITAIKTGVSWANHDVKQESFEGIA SPNVIAKDASAYYSGSVSSGGGFTLPKPILDAMLNDAKAAITHFDRDGQVYKSGYGTINEENLALYLMANFASERIRGNV GLRFISTDAESDFYQLKPDGSYADELSTLTASYSDLLPSINLAFDLAPDIIIRASASKVISRPNYDDMFSASALSGYADG IPDNEVLDRGNIALTPFKATQADLGIEWYFAAEGLLSATYFIKDIGSFITSEQLLDQSIGIIDPDSGEDSWTVSTKKNGS GGQIQGLELQLQNGFENGLGYAVNYTFADSNAPAGHYPDQVSVFSDSSKHTVNLVGYYEMDSFSARLAYNWRSEYMIREL PGYYGNREHQAYGTVDLSSRYNITEHLAISFEVVNLLAEDSIQLGVAADSAEVKPELQNNYPVFSAEGEARYKLGITVRF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96575; Mature: 96575
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDINKKAFLKITGIGRAVFKKSLMTISILLLNLVVPAFATPELDDEVITERSIERIEVR CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHEEEEE GIRTSMKDSINSKRFSDAVVDAVTAEDIGKFPDSDVGESLGRIPGVAVNRQFGQGQQVSI HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCEEEE RGASNQLTSTLLNGHSVASTGWFDQQTTDRSFNYSLLPPEMVGDIEVYKSSQADITEGGV ECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCEEEEECCCCCCCCCCC GGTVIINTRKPFELDANSLFFSHKQDYGSVSEEIDPEFSGLYSWKNSAESVGILLAVADG CCEEEEECCCCCEECCCCEEEECCCCCCCCHHHCCCCHHHHHHHCCCCCCEEEEEEEECC KTHYQRNGIESNIGWGDIVPTTFEQQRERTAINAVLQYRPTDNVELGFNMMHLDMQANNA CCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCEECEEEEEEEEECCCC NTSLFLMFPDDKEAACEQRNQAGTCIFYRRDANDANPGWAQTWVREASMDSKTFDLDFTY CCEEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEE EADNYTLEGLVGNTKSEGGTNTTANYGAWLGQARDFAGTYDATGDVIDIDIANPSFGVED ECCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCEEEEEECCCCCCCCC FNGPLAPEAWSLRKQPNSDEETYIKFDIDFPVDYGFITAIKTGVSWANHDVKQESFEGIA CCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCC SPNVIAKDASAYYSGSVSSGGGFTLPKPILDAMLNDAKAAITHFDRDGQVYKSGYGTINE CCCEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHEECCCCCEEECCCCCCCC ENLALYLMANFASERIRGNVGLRFISTDAESDFYQLKPDGSYADELSTLTASYSDLLPSI CCEEEEEEEHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCC NLAFDLAPDIIIRASASKVISRPNYDDMFSASALSGYADGIPDNEVLDRGNIALTPFKAT EEEEECCCCEEEEECHHHHHCCCCCCHHHHHHHHCHHCCCCCCHHHCCCCCEEEEECCCC QADLGIEWYFAAEGLLSATYFIKDIGSFITSEQLLDQSIGIIDPDSGEDSWTVSTKKNGS CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEECCCCC GGQIQGLELQLQNGFENGLGYAVNYTFADSNAPAGHYPDQVSVFSDSSKHTVNLVGYYEM CCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEEEEEC DSFSARLAYNWRSEYMIRELPGYYGNREHQAYGTVDLSSRYNITEHLAISFEVVNLLAED CCCCEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHEEEHHHHHHHHHCC SIQLGVAADSAEVKPELQNNYPVFSAEGEARYKLGITVRF CEEEEEECCCCCCCCHHCCCCCEEECCCCEEEEEEEEEEC >Mature Secondary Structure MMDINKKAFLKITGIGRAVFKKSLMTISILLLNLVVPAFATPELDDEVITERSIERIEVR CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHEEEEE GIRTSMKDSINSKRFSDAVVDAVTAEDIGKFPDSDVGESLGRIPGVAVNRQFGQGQQVSI HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCEEEE RGASNQLTSTLLNGHSVASTGWFDQQTTDRSFNYSLLPPEMVGDIEVYKSSQADITEGGV ECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCEEEEECCCCCCCCCCC GGTVIINTRKPFELDANSLFFSHKQDYGSVSEEIDPEFSGLYSWKNSAESVGILLAVADG CCEEEEECCCCCEECCCCEEEECCCCCCCCHHHCCCCHHHHHHHCCCCCCEEEEEEEECC KTHYQRNGIESNIGWGDIVPTTFEQQRERTAINAVLQYRPTDNVELGFNMMHLDMQANNA CCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCEECEEEEEEEEECCCC NTSLFLMFPDDKEAACEQRNQAGTCIFYRRDANDANPGWAQTWVREASMDSKTFDLDFTY CCEEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEE EADNYTLEGLVGNTKSEGGTNTTANYGAWLGQARDFAGTYDATGDVIDIDIANPSFGVED ECCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCEEEEEECCCCCCCCC FNGPLAPEAWSLRKQPNSDEETYIKFDIDFPVDYGFITAIKTGVSWANHDVKQESFEGIA CCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCC SPNVIAKDASAYYSGSVSSGGGFTLPKPILDAMLNDAKAAITHFDRDGQVYKSGYGTINE CCCEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHEECCCCCEEECCCCCCCC ENLALYLMANFASERIRGNVGLRFISTDAESDFYQLKPDGSYADELSTLTASYSDLLPSI CCEEEEEEEHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCC NLAFDLAPDIIIRASASKVISRPNYDDMFSASALSGYADGIPDNEVLDRGNIALTPFKAT EEEEECCCCEEEEECHHHHHCCCCCCHHHHHHHHCHHCCCCCCHHHCCCCCEEEEECCCC QADLGIEWYFAAEGLLSATYFIKDIGSFITSEQLLDQSIGIIDPDSGEDSWTVSTKKNGS CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEECCCCC GGQIQGLELQLQNGFENGLGYAVNYTFADSNAPAGHYPDQVSVFSDSSKHTVNLVGYYEM CCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEEEEEC DSFSARLAYNWRSEYMIRELPGYYGNREHQAYGTVDLSSRYNITEHLAISFEVVNLLAED CCCCEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHEEEHHHHHHHHHCC SIQLGVAADSAEVKPELQNNYPVFSAEGEARYKLGITVRF CEEEEEECCCCCCCCHHCCCCCEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA