Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157960126

Identifier: 157960126

GI number: 157960126

Start: 332858

End: 334183

Strand: Reverse

Name: 157960126

Synonym: Spea_0297

Alternate gene names: NA

Gene position: 334183-332858 (Counterclockwise)

Preceding gene: 157960127

Following gene: 157960125

Centisome position: 6.46

GC content: 42.68

Gene sequence:

>1326_bases
ATGGAATCGACTAGCTCATGGGTTAAAGCGCGCCACCATATTGTGTTCTTATTGGGGCTGTTTACCGCTCTGGTGATTGC
TTTTAGCATCGAAACCCGAGAATACAATCAGGTCATGGGCAATCTGTCATTTGCTCCCTCTGAGCCGATCCCCTTTAGAG
AAACAAGGGTGCTAACGGATGAGGAATACCGCTGGGCGAACATTGCTTGGAAATACTTTGAAAACAACTACCAAGATAAT
ACAGGCCTAGTTAATTCTGTTGATGGCTATCCCTCAACAACCATGTGGGATACGGCCTCTTACTTGATGGCACTAATTTC
TGCTCAAAGATTAAATATCATTAGTTTCGAAGAATTTAATCTGAAAATGGAAAAAGCTTTACACTCGCTTTCTAGGCTTC
CCCTAGTCAGGGATGAACTTCCCAATAAAGCGTACAACACCATGACGTTAGACATGGTGGACTATAATAACCAACCCGTT
GAAGGCGGAATTGGATGGTCAGCTATCGACATCGGCCGAATATTAGTTCCGATGAATATTTTAATTTGGCAGTATCCTAA
ATTTAACGGCCAAGTGAATGCAGTGTTGCAGCACTGGCAGATCCCCGCAATGACCCAAGACGGCTACTTATGGGGCTCAA
GGTTATCGTCATCTAATACCCTAGAACTGGTTCAAGAAGGGCGTATTGGCTATGAAGAATACGCTTCTAAAGCACTTAGC
CTAATGGGAAGTGATGTTTTTAATGCACTCAAATATGCCGACTATTTAAAGCTAATCGAGATCAATGGTGTAGATATCCC
TACCGACAGTAGAGATCCCGCTATATACCATGCCCACAACTATGTGGTCAGTGAATCCTATATTCTTGATAGTATCGAGT
TCGGAGGTGACAGTATTTCCAAGGTGTTTGCTTATCGAGTTTATAAAGCACAGGAAGCACGCTTCAAGCAATTAGGCATA
CTCACAGCGGTCAGTGAGGACCATATCGATCAGGCCCCCTATTTTGTTTATAACACGGTATTTTCAGATGGAAAGAAGTG
GAATTCGATTACCGATACAGGGGAAGATGCCTCAGCATATAAGACCCTTTCAACTAAAGCCGCATTTGGCTGGTATTCTC
TCTACAACACCCCCTACGCAACCCAATTAATTAAAGGTGTTAATCATCTCTATTCTAGAAATGAAGGTTGGTATTCCGGC
CTTTATGAAAGTAATGGAGAGATAAATAAAACACTGACCGCCAATACAAACGGCATTGTGCTCGAATCTCTCGCTTATAT
TCAGAGTGGCTCATTGCTCAATATTGGCGTTGAAGTTCAGCATTAA

Upstream 100 bases:

>100_bases
ATCAATAATATGATGGCCATGTGGGGGATGATCGCTGCAGCTTACTGGTCCCCTCCCTCTAACAGCGTTGCCAACCAAGT
TAATCTAGAGGAGTTAAATT

Downstream 100 bases:

>100_bases
AGGGGACTGTATGCGACTAGCACTACTTGTATGTTCAGCATTTATTGTTTCTGCTTGCGGTAACAGCTATCAAGGCTTCT
CCAATGATATTGTCGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTDEEYRWANIAWKYFENNYQDN
TGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFNLKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPV
EGGIGWSAIDIGRILVPMNILIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS
LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSISKVFAYRVYKAQEARFKQLGI
LTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAYKTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSG
LYESNGEINKTLTANTNGIVLESLAYIQSGSLLNIGVEVQH

Sequences:

>Translated_441_residues
MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTDEEYRWANIAWKYFENNYQDN
TGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFNLKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPV
EGGIGWSAIDIGRILVPMNILIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS
LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSISKVFAYRVYKAQEARFKQLGI
LTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAYKTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSG
LYESNGEINKTLTANTNGIVLESLAYIQSGSLLNIGVEVQH
>Mature_441_residues
MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTDEEYRWANIAWKYFENNYQDN
TGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFNLKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPV
EGGIGWSAIDIGRILVPMNILIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS
LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSISKVFAYRVYKAQEARFKQLGI
LTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAYKTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSG
LYESNGEINKTLTANTNGIVLESLAYIQSGSLLNIGVEVQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49948; Mature: 49948

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCC
EEYRWANIAWKYFENNYQDNTGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFN
CCCEEHHEEEEEHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHC
LKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPVEGGIGWSAIDIGRILVPMNI
HHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEE
LIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS
EEEECCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHH
LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSIS
HHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECEEEEECCCEEECHHCCCCHHH
KVFAYRVYKAQEARFKQLGILTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAY
HHHHHHHHHHHHHHHHHHHEEEECCHHCCCCCCEEEEEEHHCCCCCCCCCCCCCCCHHHH
KTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSGLYESNGEINKTLTANTNGIV
HHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEE
LESLAYIQSGSLLNIGVEVQH
HHHHHHHCCCCEEEEEEEECC
>Mature Secondary Structure
MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCC
EEYRWANIAWKYFENNYQDNTGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFN
CCCEEHHEEEEEHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHC
LKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPVEGGIGWSAIDIGRILVPMNI
HHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEE
LIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS
EEEECCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHH
LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSIS
HHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECEEEEECCCEEECHHCCCCHHH
KVFAYRVYKAQEARFKQLGILTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAY
HHHHHHHHHHHHHHHHHHHEEEECCHHCCCCCCEEEEEEHHCCCCCCCCCCCCCCCHHHH
KTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSGLYESNGEINKTLTANTNGIV
HHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEE
LESLAYIQSGSLLNIGVEVQH
HHHHHHHCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA