| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960126
Identifier: 157960126
GI number: 157960126
Start: 332858
End: 334183
Strand: Reverse
Name: 157960126
Synonym: Spea_0297
Alternate gene names: NA
Gene position: 334183-332858 (Counterclockwise)
Preceding gene: 157960127
Following gene: 157960125
Centisome position: 6.46
GC content: 42.68
Gene sequence:
>1326_bases ATGGAATCGACTAGCTCATGGGTTAAAGCGCGCCACCATATTGTGTTCTTATTGGGGCTGTTTACCGCTCTGGTGATTGC TTTTAGCATCGAAACCCGAGAATACAATCAGGTCATGGGCAATCTGTCATTTGCTCCCTCTGAGCCGATCCCCTTTAGAG AAACAAGGGTGCTAACGGATGAGGAATACCGCTGGGCGAACATTGCTTGGAAATACTTTGAAAACAACTACCAAGATAAT ACAGGCCTAGTTAATTCTGTTGATGGCTATCCCTCAACAACCATGTGGGATACGGCCTCTTACTTGATGGCACTAATTTC TGCTCAAAGATTAAATATCATTAGTTTCGAAGAATTTAATCTGAAAATGGAAAAAGCTTTACACTCGCTTTCTAGGCTTC CCCTAGTCAGGGATGAACTTCCCAATAAAGCGTACAACACCATGACGTTAGACATGGTGGACTATAATAACCAACCCGTT GAAGGCGGAATTGGATGGTCAGCTATCGACATCGGCCGAATATTAGTTCCGATGAATATTTTAATTTGGCAGTATCCTAA ATTTAACGGCCAAGTGAATGCAGTGTTGCAGCACTGGCAGATCCCCGCAATGACCCAAGACGGCTACTTATGGGGCTCAA GGTTATCGTCATCTAATACCCTAGAACTGGTTCAAGAAGGGCGTATTGGCTATGAAGAATACGCTTCTAAAGCACTTAGC CTAATGGGAAGTGATGTTTTTAATGCACTCAAATATGCCGACTATTTAAAGCTAATCGAGATCAATGGTGTAGATATCCC TACCGACAGTAGAGATCCCGCTATATACCATGCCCACAACTATGTGGTCAGTGAATCCTATATTCTTGATAGTATCGAGT TCGGAGGTGACAGTATTTCCAAGGTGTTTGCTTATCGAGTTTATAAAGCACAGGAAGCACGCTTCAAGCAATTAGGCATA CTCACAGCGGTCAGTGAGGACCATATCGATCAGGCCCCCTATTTTGTTTATAACACGGTATTTTCAGATGGAAAGAAGTG GAATTCGATTACCGATACAGGGGAAGATGCCTCAGCATATAAGACCCTTTCAACTAAAGCCGCATTTGGCTGGTATTCTC TCTACAACACCCCCTACGCAACCCAATTAATTAAAGGTGTTAATCATCTCTATTCTAGAAATGAAGGTTGGTATTCCGGC CTTTATGAAAGTAATGGAGAGATAAATAAAACACTGACCGCCAATACAAACGGCATTGTGCTCGAATCTCTCGCTTATAT TCAGAGTGGCTCATTGCTCAATATTGGCGTTGAAGTTCAGCATTAA
Upstream 100 bases:
>100_bases ATCAATAATATGATGGCCATGTGGGGGATGATCGCTGCAGCTTACTGGTCCCCTCCCTCTAACAGCGTTGCCAACCAAGT TAATCTAGAGGAGTTAAATT
Downstream 100 bases:
>100_bases AGGGGACTGTATGCGACTAGCACTACTTGTATGTTCAGCATTTATTGTTTCTGCTTGCGGTAACAGCTATCAAGGCTTCT CCAATGATATTGTCGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTDEEYRWANIAWKYFENNYQDN TGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFNLKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPV EGGIGWSAIDIGRILVPMNILIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSISKVFAYRVYKAQEARFKQLGI LTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAYKTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSG LYESNGEINKTLTANTNGIVLESLAYIQSGSLLNIGVEVQH
Sequences:
>Translated_441_residues MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTDEEYRWANIAWKYFENNYQDN TGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFNLKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPV EGGIGWSAIDIGRILVPMNILIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSISKVFAYRVYKAQEARFKQLGI LTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAYKTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSG LYESNGEINKTLTANTNGIVLESLAYIQSGSLLNIGVEVQH >Mature_441_residues MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTDEEYRWANIAWKYFENNYQDN TGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFNLKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPV EGGIGWSAIDIGRILVPMNILIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSISKVFAYRVYKAQEARFKQLGI LTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAYKTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSG LYESNGEINKTLTANTNGIVLESLAYIQSGSLLNIGVEVQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49948; Mature: 49948
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCC EEYRWANIAWKYFENNYQDNTGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFN CCCEEHHEEEEEHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHC LKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPVEGGIGWSAIDIGRILVPMNI HHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEE LIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS EEEECCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHH LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSIS HHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECEEEEECCCEEECHHCCCCHHH KVFAYRVYKAQEARFKQLGILTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAY HHHHHHHHHHHHHHHHHHHEEEECCHHCCCCCCEEEEEEHHCCCCCCCCCCCCCCCHHHH KTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSGLYESNGEINKTLTANTNGIV HHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEE LESLAYIQSGSLLNIGVEVQH HHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure MESTSSWVKARHHIVFLLGLFTALVIAFSIETREYNQVMGNLSFAPSEPIPFRETRVLTD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCC EEYRWANIAWKYFENNYQDNTGLVNSVDGYPSTTMWDTASYLMALISAQRLNIISFEEFN CCCEEHHEEEEEHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHC LKMEKALHSLSRLPLVRDELPNKAYNTMTLDMVDYNNQPVEGGIGWSAIDIGRILVPMNI HHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEE LIWQYPKFNGQVNAVLQHWQIPAMTQDGYLWGSRLSSSNTLELVQEGRIGYEEYASKALS EEEECCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHH LMGSDVFNALKYADYLKLIEINGVDIPTDSRDPAIYHAHNYVVSESYILDSIEFGGDSIS HHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECEEEEECCCEEECHHCCCCHHH KVFAYRVYKAQEARFKQLGILTAVSEDHIDQAPYFVYNTVFSDGKKWNSITDTGEDASAY HHHHHHHHHHHHHHHHHHHEEEECCHHCCCCCCEEEEEEHHCCCCCCCCCCCCCCCHHHH KTLSTKAAFGWYSLYNTPYATQLIKGVNHLYSRNEGWYSGLYESNGEINKTLTANTNGIV HHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEE LESLAYIQSGSLLNIGVEVQH HHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA