| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960125
Identifier: 157960125
GI number: 157960125
Start: 331453
End: 332847
Strand: Reverse
Name: 157960125
Synonym: Spea_0296
Alternate gene names: NA
Gene position: 332847-331453 (Counterclockwise)
Preceding gene: 157960126
Following gene: 157960124
Centisome position: 6.43
GC content: 46.67
Gene sequence:
>1395_bases ATGCGACTAGCACTACTTGTATGTTCAGCATTTATTGTTTCTGCTTGCGGTAACAGCTATCAAGGCTTCTCCAATGATAT TGTCGATCGCCATACCCATTGGCAAACACCAGAACCTCGCTCAGGAGAGCTGACTGAGCAAGAGTTAGAAATGGCCACAA TTGCTTGGAAATATTTCGAAAATAATTATCAAGAGTCCACGGGATTGGTTAATGCGGTAAATGACTACCCTTCTGTCACT TGGTGGGATGCTTCCTCCTACTTAGCTGGCATGGTCAGTGCGCTAGAATTTGGCATTATTAAGAAAGAAGAATTCGATCG CCGCTTTATTCGCTTTATTGCCACCTTAAACACCATTGACCTTTTTATGGGAGAGCTCCCCAACAAGGCTTACAACACCC AAAATGCCGCTAAGGTGGATTATGCGAACCAACCCGGCGAGATAGGCTACTCCGCCCTCGACTTAGGCCGACTGCTCATT TGGCTACATATTATCAAACATCGTTTTCCCCAGTACGCCAGTGCCATCGATTCAGCAGTGCTACGCTGGAACTTTTGTAA TGTCGTCGATGAGAACGGCACCATGTTCGGCGCACTATTAGAGCCTGGCAAGCCCGTGCAATACCTACAAGAAGGCCGCT TAGGTTACGAAGAATATGCAGCCAAAGGCTTCGAGTTATGGGGATTCAACACCAAGCAGGCATTGATGCCTGAGCCTTAT GCCACCATAAATATGTACGGCTACGATATCCCTTATGACACTCGAGACCCTAGAAAACTTAAAGCCCATAGCTACGTGGT CACCGAAAGTTATGTACTAGATGGCATCGAGCTGGGCTGGGATGTCACTAGCGATCATAGCGCACATGACGACAACTATA GCCACGCTTGGGTCGCCGAGTTTGCATTGCAAATCTACCGCGTGCAGGAAAAGCGCTATCAGGAAACTGGCATTATTACC GCCCGAACTGAGCATCAACTCGCTGGTGCGCCCTACTTCGTATACGACACGATTTACACCGATGGTTTTGCTTGGAACAC CATATCCGAAGTGGGTGATTTTCTACCACAATATTCAGCCGTTGCCATCAAAGGCGCCATGGGGATGTGGGTGCTTTGGG ACACAGAGTATACCGACCTGCTATTTGAGCATGTCAGTCACGTTTACGACCGTGAAAAAGGCTTCTACGAGGGTATTTTT GAAAATGGAACCGGCCTGATTAACACCTTCACTTCGAACAATAACGGGATCCTATTGGAAATTTTACTGTATAAAAAACA AGGAAAACTCCTGCAATACCAAGCAACCACAGCACCAAGCCTTTGGGAAAAAGCATTACAAAGTCCATTTGGCTACGAAG GACAATGCTTACCTAGAAACGTAGAAACTGACTAA
Upstream 100 bases:
>100_bases ACCGCCAATACAAACGGCATTGTGCTCGAATCTCTCGCTTATATTCAGAGTGGCTCATTGCTCAATATTGGCGTTGAAGT TCAGCATTAAAGGGGACTGT
Downstream 100 bases:
>100_bases TTTTCGGCCTTATCGGAGTCATATGCTACGACAATGTATTTTGCTGTTAGTACTGCTTAATCTTCAAGCTTGCGGCCTGG TCTATCAGGGCGTGCAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MRLALLVCSAFIVSACGNSYQGFSNDIVDRHTHWQTPEPRSGELTEQELEMATIAWKYFENNYQESTGLVNAVNDYPSVT WWDASSYLAGMVSALEFGIIKKEEFDRRFIRFIATLNTIDLFMGELPNKAYNTQNAAKVDYANQPGEIGYSALDLGRLLI WLHIIKHRFPQYASAIDSAVLRWNFCNVVDENGTMFGALLEPGKPVQYLQEGRLGYEEYAAKGFELWGFNTKQALMPEPY ATINMYGYDIPYDTRDPRKLKAHSYVVTESYVLDGIELGWDVTSDHSAHDDNYSHAWVAEFALQIYRVQEKRYQETGIIT ARTEHQLAGAPYFVYDTIYTDGFAWNTISEVGDFLPQYSAVAIKGAMGMWVLWDTEYTDLLFEHVSHVYDREKGFYEGIF ENGTGLINTFTSNNNGILLEILLYKKQGKLLQYQATTAPSLWEKALQSPFGYEGQCLPRNVETD
Sequences:
>Translated_464_residues MRLALLVCSAFIVSACGNSYQGFSNDIVDRHTHWQTPEPRSGELTEQELEMATIAWKYFENNYQESTGLVNAVNDYPSVT WWDASSYLAGMVSALEFGIIKKEEFDRRFIRFIATLNTIDLFMGELPNKAYNTQNAAKVDYANQPGEIGYSALDLGRLLI WLHIIKHRFPQYASAIDSAVLRWNFCNVVDENGTMFGALLEPGKPVQYLQEGRLGYEEYAAKGFELWGFNTKQALMPEPY ATINMYGYDIPYDTRDPRKLKAHSYVVTESYVLDGIELGWDVTSDHSAHDDNYSHAWVAEFALQIYRVQEKRYQETGIIT ARTEHQLAGAPYFVYDTIYTDGFAWNTISEVGDFLPQYSAVAIKGAMGMWVLWDTEYTDLLFEHVSHVYDREKGFYEGIF ENGTGLINTFTSNNNGILLEILLYKKQGKLLQYQATTAPSLWEKALQSPFGYEGQCLPRNVETD >Mature_464_residues MRLALLVCSAFIVSACGNSYQGFSNDIVDRHTHWQTPEPRSGELTEQELEMATIAWKYFENNYQESTGLVNAVNDYPSVT WWDASSYLAGMVSALEFGIIKKEEFDRRFIRFIATLNTIDLFMGELPNKAYNTQNAAKVDYANQPGEIGYSALDLGRLLI WLHIIKHRFPQYASAIDSAVLRWNFCNVVDENGTMFGALLEPGKPVQYLQEGRLGYEEYAAKGFELWGFNTKQALMPEPY ATINMYGYDIPYDTRDPRKLKAHSYVVTESYVLDGIELGWDVTSDHSAHDDNYSHAWVAEFALQIYRVQEKRYQETGIIT ARTEHQLAGAPYFVYDTIYTDGFAWNTISEVGDFLPQYSAVAIKGAMGMWVLWDTEYTDLLFEHVSHVYDREKGFYEGIF ENGTGLINTFTSNNNGILLEILLYKKQGKLLQYQATTAPSLWEKALQSPFGYEGQCLPRNVETD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52984; Mature: 52984
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLALLVCSAFIVSACGNSYQGFSNDIVDRHTHWQTPEPRSGELTEQELEMATIAWKYFE CHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NNYQESTGLVNAVNDYPSVTWWDASSYLAGMVSALEFGIIKKEEFDRRFIRFIATLNTID CCCHHHCCCEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LFMGELPNKAYNTQNAAKVDYANQPGEIGYSALDLGRLLIWLHIIKHRFPQYASAIDSAV HHHHHCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRWNFCNVVDENGTMFGALLEPGKPVQYLQEGRLGYEEYAAKGFELWGFNTKQALMPEPY HEEEEHEEECCCCCEEEEECCCCCCHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCC ATINMYGYDIPYDTRDPRKLKAHSYVVTESYVLDGIELGWDVTSDHSAHDDNYSHAWVAE EEEEEEEECCCCCCCCCCHHHHCEEEEEHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHH FALQIYRVQEKRYQETGIITARTEHQLAGAPYFVYDTIYTDGFAWNTISEVGDFLPQYSA HHHHHHHHHHHHHHHCCEEEEECCCHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCHHH VAIKGAMGMWVLWDTEYTDLLFEHVSHVYDREKGFYEGIFENGTGLINTFTSNNNGILLE EEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCCEEEE ILLYKKQGKLLQYQATTAPSLWEKALQSPFGYEGQCLPRNVETD EEEEECCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLALLVCSAFIVSACGNSYQGFSNDIVDRHTHWQTPEPRSGELTEQELEMATIAWKYFE CHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NNYQESTGLVNAVNDYPSVTWWDASSYLAGMVSALEFGIIKKEEFDRRFIRFIATLNTID CCCHHHCCCEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LFMGELPNKAYNTQNAAKVDYANQPGEIGYSALDLGRLLIWLHIIKHRFPQYASAIDSAV HHHHHCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRWNFCNVVDENGTMFGALLEPGKPVQYLQEGRLGYEEYAAKGFELWGFNTKQALMPEPY HEEEEHEEECCCCCEEEEECCCCCCHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCC ATINMYGYDIPYDTRDPRKLKAHSYVVTESYVLDGIELGWDVTSDHSAHDDNYSHAWVAE EEEEEEEECCCCCCCCCCHHHHCEEEEEHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHH FALQIYRVQEKRYQETGIITARTEHQLAGAPYFVYDTIYTDGFAWNTISEVGDFLPQYSA HHHHHHHHHHHHHHHCCEEEEECCCHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCHHH VAIKGAMGMWVLWDTEYTDLLFEHVSHVYDREKGFYEGIFENGTGLINTFTSNNNGILLE EEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCCEEEE ILLYKKQGKLLQYQATTAPSLWEKALQSPFGYEGQCLPRNVETD EEEEECCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA