| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is sam [H]
Identifier: 157960077
GI number: 157960077
Start: 277842
End: 278726
Strand: Direct
Name: sam [H]
Synonym: Spea_0248
Alternate gene names: 157960077
Gene position: 277842-278726 (Clockwise)
Preceding gene: 157960075
Following gene: 157960082
Centisome position: 5.37
GC content: 45.76
Gene sequence:
>885_bases ATGAAATCCAATGTCATGATTGCCATGGCAATACTCGTTTTTGGTAACCTTTTTAGCGCACTCTATGATGTGTCCATTAA GTGGATCCCTGAGGGAAGTAACGCGGCTACCTTTTTGTTAATACGGCAGCTACTGTCGGTGCTGATGTTATTGCCACTAT GGTTTTATGCCAAAAGACCAACGACTAAGCACCTGAAAGTGCACTTCTTTCGCTCTAACACTGGGGCATTGGGCGCGGTG TGCCTGATCATGGGCTTAATGTCATTACCGATTGCCACGGTAAGTTCACTGTTTTTCTCTGCACCGCTGATGATAGTGCT GATGGGCTCGATTTTCCTAAAAGAGAAGGTCACGTCGACTCAATGGATCGCCACTATTTTAGGTTTTATTGGCATCTTAA TACTATTGCGCCCAAGTGAGATAAATTGGTTTGGTGTTGCTGTGTTGATCTCGGCATTCACCTTTGCCCTGAATCAGCTA GCGCTACGTAAACTACCCTACACCGAAAACCCGAGTGTCACCTTGATGCTCTATAACACCCTCAGTATCCCGCTTACATT CATTATGGTGTTAGTGCAGGGCTTCGAGGGGGTCAGTTGGGCTCTAATTGGCATGGCTGCGCTCAGTAATAGTTTCTTGC TGGCCTATCATTGGTTATGTGTGCTGGCTTACCGTAAGGCCGAGGCGAGTCAAATTGCGATTGCCGAATACACTGGGCTA CTATTTTGTGTATTGTTTGGCTGGTTATTGTTTGATGAGTGGTTAGATGGTTTAAGCTGGGTTGGTGCAGGCTTTATCGT GTTGCCGTCTTTAATTATCCCATGGGTTGCGGCTCGGATAGCTTATTTAAGACCAAAAAAAATCATCGAGCAAAAGGCTG GATGA
Upstream 100 bases:
>100_bases AGTATTAATTTAATTCATGTATGGCTAAAAAACATCATTTTAGTTTAGCTTTTGCGGGCTATATCATGCGCCTAAATTCA GTTGTACTGTGGAATAACAG
Downstream 100 bases:
>100_bases TTTCTTTAATCGCTGGTGGACGTCTCTGTATTACAGATTAAGAGTCCGTGTATTCAAATACCTTAATGACTTTACGTACG CCAGCGGTATTTCGAGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKSNVMIAMAILVFGNLFSALYDVSIKWIPEGSNAATFLLIRQLLSVLMLLPLWFYAKRPTTKHLKVHFFRSNTGALGAV CLIMGLMSLPIATVSSLFFSAPLMIVLMGSIFLKEKVTSTQWIATILGFIGILILLRPSEINWFGVAVLISAFTFALNQL ALRKLPYTENPSVTLMLYNTLSIPLTFIMVLVQGFEGVSWALIGMAALSNSFLLAYHWLCVLAYRKAEASQIAIAEYTGL LFCVLFGWLLFDEWLDGLSWVGAGFIVLPSLIIPWVAARIAYLRPKKIIEQKAG
Sequences:
>Translated_294_residues MKSNVMIAMAILVFGNLFSALYDVSIKWIPEGSNAATFLLIRQLLSVLMLLPLWFYAKRPTTKHLKVHFFRSNTGALGAV CLIMGLMSLPIATVSSLFFSAPLMIVLMGSIFLKEKVTSTQWIATILGFIGILILLRPSEINWFGVAVLISAFTFALNQL ALRKLPYTENPSVTLMLYNTLSIPLTFIMVLVQGFEGVSWALIGMAALSNSFLLAYHWLCVLAYRKAEASQIAIAEYTGL LFCVLFGWLLFDEWLDGLSWVGAGFIVLPSLIIPWVAARIAYLRPKKIIEQKAG >Mature_294_residues MKSNVMIAMAILVFGNLFSALYDVSIKWIPEGSNAATFLLIRQLLSVLMLLPLWFYAKRPTTKHLKVHFFRSNTGALGAV CLIMGLMSLPIATVSSLFFSAPLMIVLMGSIFLKEKVTSTQWIATILGFIGILILLRPSEINWFGVAVLISAFTFALNQL ALRKLPYTENPSVTLMLYNTLSIPLTFIMVLVQGFEGVSWALIGMAALSNSFLLAYHWLCVLAYRKAEASQIAIAEYTGL LFCVLFGWLLFDEWLDGLSWVGAGFIVLPSLIIPWVAARIAYLRPKKIIEQKAG
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32665; Mature: 32665
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNVMIAMAILVFGNLFSALYDVSIKWIPEGSNAATFLLIRQLLSVLMLLPLWFYAKRP CCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TTKHLKVHFFRSNTGALGAVCLIMGLMSLPIATVSSLFFSAPLMIVLMGSIFLKEKVTST CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWIATILGFIGILILLRPSEINWFGVAVLISAFTFALNQLALRKLPYTENPSVTLMLYNT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECH LSIPLTFIMVLVQGFEGVSWALIGMAALSNSFLLAYHWLCVLAYRKAEASQIAIAEYTGL HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LFCVLFGWLLFDEWLDGLSWVGAGFIVLPSLIIPWVAARIAYLRPKKIIEQKAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC >Mature Secondary Structure MKSNVMIAMAILVFGNLFSALYDVSIKWIPEGSNAATFLLIRQLLSVLMLLPLWFYAKRP CCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TTKHLKVHFFRSNTGALGAVCLIMGLMSLPIATVSSLFFSAPLMIVLMGSIFLKEKVTST CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWIATILGFIGILILLRPSEINWFGVAVLISAFTFALNQLALRKLPYTENPSVTLMLYNT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECH LSIPLTFIMVLVQGFEGVSWALIGMAALSNSFLLAYHWLCVLAYRKAEASQIAIAEYTGL HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LFCVLFGWLLFDEWLDGLSWVGAGFIVLPSLIIPWVAARIAYLRPKKIIEQKAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA