| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157959965
Identifier: 157959965
GI number: 157959965
Start: 150597
End: 151352
Strand: Reverse
Name: 157959965
Synonym: Spea_0135
Alternate gene names: NA
Gene position: 151352-150597 (Counterclockwise)
Preceding gene: 157959967
Following gene: 157959964
Centisome position: 2.92
GC content: 47.22
Gene sequence:
>756_bases ATGAAATCTACAGCGACTCTGCTTGCCGCACTTATTACCGTGTCACTATCGGGCTGCATCATCAATGTAAATGGTGCCAA CGCGGGGCCCCTTAACCACCAAAAGAAACAACTTCAAATTGATGCTAACGATATCGATACCTTAGTGGCTGAAACAGGCG CAGGAGACCTCAAGATTCAAGGTGTCGATGGGCTTGCGCAGATCATGGTCACTGCGGATATTTATACCTATGGTGATATA GAAAGTAATCTCAGCCTTAAGCAGAGCGGCTCAAAAGCGACACTAGTTGCAGAGTTCGATAGCAGCATTAACTTTCAGCG CTCACCCTATATCGATCTTACCATTCAGGTACCTAGCAGCATGATGCTAGATATCGACGATGGCTCGGGTGATATCGAGA TCAATGGCCTTTCGGCAAACATTACACTTGATGATGGTTCTGGTGATGTTTGGATCAAGGGCGGTAACGACCTCAACATC CAAGACGGCTCGGGCTCAATCGATATCAGCAACACTACAGGCAAACTCACCCTAGAAGATGGTTCAGGTTCTATTACCCT ATCTGGTATTGGCGGTGATACCCATATCGATGATGGCTCGGGCGATTTAAGCGTAGAAAACGTCAATGGTCATGTGGTGA TTGACGATGGCTCGGGCGACATCGATGTCGACAATACCCTAGGGCTAAGCATTATCGAATCTGGCTCTGGTGATTTAAGC GTAGATAACATCAACGGCTCAGTCAGCATGCACTAA
Upstream 100 bases:
>100_bases ATAGATAACTTATTGGCACACTTTCTGCTTATTGATAGGTATTAAAAAAGACAGCAGCTTGTAAATGCTGCCAATCAGAA TAATAAAAGGAAGTTTACTC
Downstream 100 bases:
>100_bases CCATTGCGACTATCACGCTAAACGGCTTCCCGGCGCAAGGCTTGCTGTCGACTAGTGCATTTGGACAATGATACTGACCA AGTACACTAACGCCAGCAGT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKSTATLLAALITVSLSGCIINVNGANAGPLNHQKKQLQIDANDIDTLVAETGAGDLKIQGVDGLAQIMVTADIYTYGDI ESNLSLKQSGSKATLVAEFDSSINFQRSPYIDLTIQVPSSMMLDIDDGSGDIEINGLSANITLDDGSGDVWIKGGNDLNI QDGSGSIDISNTTGKLTLEDGSGSITLSGIGGDTHIDDGSGDLSVENVNGHVVIDDGSGDIDVDNTLGLSIIESGSGDLS VDNINGSVSMH
Sequences:
>Translated_251_residues MKSTATLLAALITVSLSGCIINVNGANAGPLNHQKKQLQIDANDIDTLVAETGAGDLKIQGVDGLAQIMVTADIYTYGDI ESNLSLKQSGSKATLVAEFDSSINFQRSPYIDLTIQVPSSMMLDIDDGSGDIEINGLSANITLDDGSGDVWIKGGNDLNI QDGSGSIDISNTTGKLTLEDGSGSITLSGIGGDTHIDDGSGDLSVENVNGHVVIDDGSGDIDVDNTLGLSIIESGSGDLS VDNINGSVSMH >Mature_251_residues MKSTATLLAALITVSLSGCIINVNGANAGPLNHQKKQLQIDANDIDTLVAETGAGDLKIQGVDGLAQIMVTADIYTYGDI ESNLSLKQSGSKATLVAEFDSSINFQRSPYIDLTIQVPSSMMLDIDDGSGDIEINGLSANITLDDGSGDVWIKGGNDLNI QDGSGSIDISNTTGKLTLEDGSGSITLSGIGGDTHIDDGSGDLSVENVNGHVVIDDGSGDIDVDNTLGLSIIESGSGDLS VDNINGSVSMH
Specific function: Unknown
COG id: COG3595
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25742; Mature: 25742
Theoretical pI: Translated: 3.67; Mature: 3.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTATLLAALITVSLSGCIINVNGANAGPLNHQKKQLQIDANDIDTLVAETGAGDLKIQ CCHHHHHHHHHHHEEECCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEE GVDGLAQIMVTADIYTYGDIESNLSLKQSGSKATLVAEFDSSINFQRSPYIDLTIQVPSS CCCCEEEEEEEEEEEEECCCCCCCEEECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCE MMLDIDDGSGDIEINGLSANITLDDGSGDVWIKGGNDLNIQDGSGSIDISNTTGKLTLED EEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCCEEEEECCCCEEEEECCCCEEEEEC GSGSITLSGIGGDTHIDDGSGDLSVENVNGHVVIDDGSGDIDVDNTLGLSIIESGSGDLS CCCEEEEEECCCCCEECCCCCCEEEEECCCEEEEECCCCCEEECCCCCEEEEECCCCCEE VDNINGSVSMH EEECCCEEEEC >Mature Secondary Structure MKSTATLLAALITVSLSGCIINVNGANAGPLNHQKKQLQIDANDIDTLVAETGAGDLKIQ CCHHHHHHHHHHHEEECCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEE GVDGLAQIMVTADIYTYGDIESNLSLKQSGSKATLVAEFDSSINFQRSPYIDLTIQVPSS CCCCEEEEEEEEEEEEECCCCCCCEEECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCE MMLDIDDGSGDIEINGLSANITLDDGSGDVWIKGGNDLNIQDGSGSIDISNTTGKLTLED EEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCCEEEEECCCCEEEEECCCCEEEEEC GSGSITLSGIGGDTHIDDGSGDLSVENVNGHVVIDDGSGDIDVDNTLGLSIIESGSGDLS CCCEEEEEECCCCCEECCCCCCEEEEECCCEEEEECCCCCEEECCCCCEEEEECCCCCEE VDNINGSVSMH EEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA