| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157959951
Identifier: 157959951
GI number: 157959951
Start: 133841
End: 134626
Strand: Direct
Name: 157959951
Synonym: Spea_0121
Alternate gene names: NA
Gene position: 133841-134626 (Clockwise)
Preceding gene: 157959950
Following gene: 157959952
Centisome position: 2.59
GC content: 44.66
Gene sequence:
>786_bases ATGCGCTTAGCAGATTGGCAAAAGGCCTTCATTCAGGCGCTCGAGCCGCAAGGCAGCGCAACTCGTCTTGTCCAATTAGT TAACGAGGCAGAGCAGAATAGGCTAGAGATATACCGTAATAATGCTTTTCAAGCGATATTGAGCGCACTGCAGTTAGTCT TTCCTGTCTGCCAAGCCGTGGTTGGTGAAACTTGTTTTACACAATTGGTAAAAGGTTACGGTCAGCAATACCCATTAAAT GACAGTAACTTGAATCGATATGGTCAGAACTTTGCTCACTGGCTAGCGCTAGAGATTAGTCAGCATCAAGTTTTTAGAGA TCTGCAGTACTTACCAGAGCTTGCTCAATTGGAATGGTTACTAAACCAGAGCTACTACGCAATGGATTTAGAGGGATTTA TGCTGCCGCCAAATTGTAGTCTAGAGCAATTAGCCGAGCTAAATGATCTGGAGCAGCAACAGGCAGTTTTATTGTTACGG CCGGATCTCGAACTGCTCATTTGTCATTATCCTGTGCAGCAGGTATGGCATCGACATAAACAGAGTTCGAAAAACAATAT TGCGGAACATATTGATAATGATGCCTATTATCTAGTGATCCATAGAAACGGTTTTAAGGCGGAGTTTAGTCTAGTGGAGC AGCCTATGATGCGGTTACTGCAAGCATTAGCGGAAGGGCAAACACTAGCGCAAATTACCAATCCGGCCCAAGATCTTAGT CTCTTGAGTGAGTTGATCGAGCGCCAGTGGATCTGTGGTTTTAGGTTAGCGGTTGAGACTGGGTAA
Upstream 100 bases:
>100_bases TACCGACGTTGGAGCGTTTACTGCAAGAGCGACAAATTGCAGCCGATATATTACGAGAACCGGCAGTAGTTGGTGCTAGA GATGGTGTAGGTGACGAGCG
Downstream 100 bases:
>100_bases TCTGTATGGATAGAGAACTATTACAGAGTTTGTATCGATACTGTATTTGCCTCACAGGTCATAGCGCTCAAGCAGAGGAT TTGCTGCAAACGGCGGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MRLADWQKAFIQALEPQGSATRLVQLVNEAEQNRLEIYRNNAFQAILSALQLVFPVCQAVVGETCFTQLVKGYGQQYPLN DSNLNRYGQNFAHWLALEISQHQVFRDLQYLPELAQLEWLLNQSYYAMDLEGFMLPPNCSLEQLAELNDLEQQQAVLLLR PDLELLICHYPVQQVWHRHKQSSKNNIAEHIDNDAYYLVIHRNGFKAEFSLVEQPMMRLLQALAEGQTLAQITNPAQDLS LLSELIERQWICGFRLAVETG
Sequences:
>Translated_261_residues MRLADWQKAFIQALEPQGSATRLVQLVNEAEQNRLEIYRNNAFQAILSALQLVFPVCQAVVGETCFTQLVKGYGQQYPLN DSNLNRYGQNFAHWLALEISQHQVFRDLQYLPELAQLEWLLNQSYYAMDLEGFMLPPNCSLEQLAELNDLEQQQAVLLLR PDLELLICHYPVQQVWHRHKQSSKNNIAEHIDNDAYYLVIHRNGFKAEFSLVEQPMMRLLQALAEGQTLAQITNPAQDLS LLSELIERQWICGFRLAVETG >Mature_261_residues MRLADWQKAFIQALEPQGSATRLVQLVNEAEQNRLEIYRNNAFQAILSALQLVFPVCQAVVGETCFTQLVKGYGQQYPLN DSNLNRYGQNFAHWLALEISQHQVFRDLQYLPELAQLEWLLNQSYYAMDLEGFMLPPNCSLEQLAELNDLEQQQAVLLLR PDLELLICHYPVQQVWHRHKQSSKNNIAEHIDNDAYYLVIHRNGFKAEFSLVEQPMMRLLQALAEGQTLAQITNPAQDLS LLSELIERQWICGFRLAVETG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30114; Mature: 30114
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLADWQKAFIQALEPQGSATRLVQLVNEAEQNRLEIYRNNAFQAILSALQLVFPVCQAV CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGETCFTQLVKGYGQQYPLNDSNLNRYGQNFAHWLALEISQHQVFRDLQYLPELAQLEWL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNQSYYAMDLEGFMLPPNCSLEQLAELNDLEQQQAVLLLRPDLELLICHYPVQQVWHRHK HCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHCEEEEECCCHHEEEECCCHHHHHHHHH QSSKNNIAEHIDNDAYYLVIHRNGFKAEFSLVEQPMMRLLQALAEGQTLAQITNPAQDLS HCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHH LLSELIERQWICGFRLAVETG HHHHHHHHHHHHHEEEEEECC >Mature Secondary Structure MRLADWQKAFIQALEPQGSATRLVQLVNEAEQNRLEIYRNNAFQAILSALQLVFPVCQAV CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGETCFTQLVKGYGQQYPLNDSNLNRYGQNFAHWLALEISQHQVFRDLQYLPELAQLEWL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNQSYYAMDLEGFMLPPNCSLEQLAELNDLEQQQAVLLLRPDLELLICHYPVQQVWHRHK HCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHCEEEEECCCHHEEEECCCHHHHHHHHH QSSKNNIAEHIDNDAYYLVIHRNGFKAEFSLVEQPMMRLLQALAEGQTLAQITNPAQDLS HCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHH LLSELIERQWICGFRLAVETG HHHHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA