| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157959944
Identifier: 157959944
GI number: 157959944
Start: 127858
End: 128913
Strand: Direct
Name: 157959944
Synonym: Spea_0114
Alternate gene names: NA
Gene position: 127858-128913 (Clockwise)
Preceding gene: 157959943
Following gene: 157959946
Centisome position: 2.47
GC content: 43.28
Gene sequence:
>1056_bases GTGAGTGGGAACAACAAACGTTATTTATTGTATATTGCGCAGAACTATTCATATGCGATTTTGCGGCCGTTGCAACAAGC TATACAAGCACGAGGGGATGAGGCTTGTTGGTTTCTAGAAGGCTGTGAGGTGAATCCTGCTTTTTTAAGGCCGACAGAGA AGCGACTGTTAACTATTGCTGAAGTCAAAGCGTGGAAGCCTGATGCTGTATTAGTACCTGGAAATATGGTGCCTGATTTT ATTCCAGGAATTAAAGTCGGTGTTTTCCATGGTTTTAATTCAGGGAAAAGAAATCAAAGAGGCCATTTTCAAATACGCAA TTGCTTCGATCTCTACTGCACTCAGGGGCCTGCGACAACGCTACCTTTTGAGGATCTGGCTGACAAATCCGGAACCTTTA AAGTGGCAGAAACTGGCTGGCCGACACTGGATCCTATGTATAAAGGGGAGTTAGATCTTGCTTACGATGTAGAGGGAGAT AATAGGCCTGTTGTGCTTTTTTGTTCTACTTTTTCTCATCGTTTATCTTGTGCGCCTATCGTCTACGATAAGATTAAAGC CTTATCGGAGCAGGGAAATTGGCGATGGTTGGTACAGTTCCATCCAAAGATGAGTAAAGAGATTGTAGATAAATACAAGG CGCTTCAAAGTGACAACCTGACATTTGTAGAGACAGATAATGTTTTGCCATTATTGCAGGCGGCGGATGTGATGCTGTGT GATACCTCATCAGTATTGATTATGTTTTTACTACAGGGTAAGCCTGTGGTGACGTTCAAAAATAATACAAGTTGGTCGCA TCTTGTTAATGTAGAACAGCTCGATGAAATCGAGCCTGCATTAAAGGAGGCGCTGAGAAGGCCTCCTGAGCTAATGGCTA GAATAGAAGCGTATTGTGATGATATTCATCCATTTCGGGATGGACTGTCGAGTGAGCGGGTGCTCGCTGCGACAGATGAT CTGCTTGAAAATGGTACTGCCGGACTTAAGCGTAAGCCATTAAATTTATTGCGCCACTTAAAGATGCGACGCAAATTAGG CTATTGGAGAATATAG
Upstream 100 bases:
>100_bases CAGAAGTCGATATTTTAGCAAAAGTACAAGCAGCACGGATTGCTCAAGAATATTTGGCGTTGGTTAAATAAACATTGAAG AGTTTGTGGGGAGAATTGTT
Downstream 100 bases:
>100_bases CGCAATTTTACTGATGACAGAGCTCAATGTATTTTTGTGCAATATGACGACTATCTACCTTTTTTATAATATCGATATTC TCTAATTGAGGAGGGGCTGC
Product: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSGNNKRYLLYIAQNYSYAILRPLQQAIQARGDEACWFLEGCEVNPAFLRPTEKRLLTIAEVKAWKPDAVLVPGNMVPDF IPGIKVGVFHGFNSGKRNQRGHFQIRNCFDLYCTQGPATTLPFEDLADKSGTFKVAETGWPTLDPMYKGELDLAYDVEGD NRPVVLFCSTFSHRLSCAPIVYDKIKALSEQGNWRWLVQFHPKMSKEIVDKYKALQSDNLTFVETDNVLPLLQAADVMLC DTSSVLIMFLLQGKPVVTFKNNTSWSHLVNVEQLDEIEPALKEALRRPPELMARIEAYCDDIHPFRDGLSSERVLAATDD LLENGTAGLKRKPLNLLRHLKMRRKLGYWRI
Sequences:
>Translated_351_residues MSGNNKRYLLYIAQNYSYAILRPLQQAIQARGDEACWFLEGCEVNPAFLRPTEKRLLTIAEVKAWKPDAVLVPGNMVPDF IPGIKVGVFHGFNSGKRNQRGHFQIRNCFDLYCTQGPATTLPFEDLADKSGTFKVAETGWPTLDPMYKGELDLAYDVEGD NRPVVLFCSTFSHRLSCAPIVYDKIKALSEQGNWRWLVQFHPKMSKEIVDKYKALQSDNLTFVETDNVLPLLQAADVMLC DTSSVLIMFLLQGKPVVTFKNNTSWSHLVNVEQLDEIEPALKEALRRPPELMARIEAYCDDIHPFRDGLSSERVLAATDD LLENGTAGLKRKPLNLLRHLKMRRKLGYWRI >Mature_350_residues SGNNKRYLLYIAQNYSYAILRPLQQAIQARGDEACWFLEGCEVNPAFLRPTEKRLLTIAEVKAWKPDAVLVPGNMVPDFI PGIKVGVFHGFNSGKRNQRGHFQIRNCFDLYCTQGPATTLPFEDLADKSGTFKVAETGWPTLDPMYKGELDLAYDVEGDN RPVVLFCSTFSHRLSCAPIVYDKIKALSEQGNWRWLVQFHPKMSKEIVDKYKALQSDNLTFVETDNVLPLLQAADVMLCD TSSVLIMFLLQGKPVVTFKNNTSWSHLVNVEQLDEIEPALKEALRRPPELMARIEAYCDDIHPFRDGLSSERVLAATDDL LENGTAGLKRKPLNLLRHLKMRRKLGYWRI
Specific function: Unknown
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39938; Mature: 39806
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNNKRYLLYIAQNYSYAILRPLQQAIQARGDEACWFLEGCEVNPAFLRPTEKRLLTIA CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCHHHHEEEE EVKAWKPDAVLVPGNMVPDFIPGIKVGVFHGFNSGKRNQRGHFQIRNCFDLYCTQGPATT HHHCCCCCEEEECCCCCCHHCCCCEEEEEECCCCCCCCCCCCEEEECEEEEEECCCCCCC LPFEDLADKSGTFKVAETGWPTLDPMYKGELDLAYDVEGDNRPVVLFCSTFSHRLSCAPI CCHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHH VYDKIKALSEQGNWRWLVQFHPKMSKEIVDKYKALQSDNLTFVETDNVLPLLQAADVMLC HHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCEEEE DTSSVLIMFLLQGKPVVTFKNNTSWSHLVNVEQLDEIEPALKEALRRPPELMARIEAYCD CCHHHHHHHEECCCEEEEEECCCCHHHEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DIHPFRDGLSSERVLAATDDLLENGTAGLKRKPLNLLRHLKMRRKLGYWRI CCCHHHCCCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SGNNKRYLLYIAQNYSYAILRPLQQAIQARGDEACWFLEGCEVNPAFLRPTEKRLLTIA CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCHHHHEEEE EVKAWKPDAVLVPGNMVPDFIPGIKVGVFHGFNSGKRNQRGHFQIRNCFDLYCTQGPATT HHHCCCCCEEEECCCCCCHHCCCCEEEEEECCCCCCCCCCCCEEEECEEEEEECCCCCCC LPFEDLADKSGTFKVAETGWPTLDPMYKGELDLAYDVEGDNRPVVLFCSTFSHRLSCAPI CCHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHH VYDKIKALSEQGNWRWLVQFHPKMSKEIVDKYKALQSDNLTFVETDNVLPLLQAADVMLC HHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCEEEE DTSSVLIMFLLQGKPVVTFKNNTSWSHLVNVEQLDEIEPALKEALRRPPELMARIEAYCD CCHHHHHHHEECCCEEEEEECCCCHHHEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DIHPFRDGLSSERVLAATDDLLENGTAGLKRKPLNLLRHLKMRRKLGYWRI CCCHHHCCCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA