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The map label for this gene is rfaB [C]

Identifier: 157959943

GI number: 157959943

Start: 126743

End: 127828

Strand: Direct

Name: rfaB [C]

Synonym: Spea_0113

Alternate gene names: 157959943

Gene position: 126743-127828 (Clockwise)

Preceding gene: 157959942

Following gene: 157959944

Centisome position: 2.45

GC content: 42.73

Gene sequence:

>1086_bases
ATGAGAATTGCTATTGCGATTGATAGCCTAGGTGGCGGCGGTGCACAGAAAGTGATGCTGACATTGGCTAAAGAGTTTAC
AGAGTTGGGCCATGAGCCGCATTTTTTTGTGATGTCCGATAATACGGCATTTGATATTCCTCAAAGCTTGCCCGTACATA
TTTGTTTTGCCAAAAAAGATCGAGATTTCAATCGATTCTGGAACTTGGCTCCAGCGGTAGAGAAACTTACTGCGAAAATT
CGGAGTATCGAGCAGACCGTTGGGAAATTTGATCTATTCTTGTCAAACTTAGATAAAACTAATCGTTTGATGGTAAAAAC
AAATGTTTCCCCATTATTTGTTGTGGTTCATGCATCGGTTGAGGAGGAATTAACTCGACATGCTAAGTTAGGTCCTTTTG
CCTATCTGAAGAAGCTGTTGGCTAAGAAAGCATTGAACGGGCACCATTTAGTAACAGTGTCTGAGGGGATTGCTAACGAG
ATTCGACAAACAAAGCGTATTGAGCCAGCTTCAATAAAATGCATCTATAATCCGTTTGAGTTTGATGAGATCGACCACTT
ATCACAGCAGCAAGCGCAAGGGATCCCGGATTCGGACTATTTAATTCATATCGGTCGTTATGTTAAGCAGAAGCGCCATG
ATGTGCTGTTCCAATCCATTGCTAAGATGAAGAGTCAAATTCCAGTGGTACTTCTGTGTCATAACCCTAAAAAAGCACGT
AAGGCAGCTAAGAAATACGGTGTGGAAAGTCGAGTCGTTATTCCAGGATTCCAACCTAATCCTTTTCCATGGATAAAGAG
TGCTAAGGCCCTAGTATTGAGTTCTGACTTTGAAGGTTTACCAACGGTTTTGATTGAATCATTAGCCTGCGGTACACCTG
TGGTGAGTACAGATTGTCCTCACGGGCCGAGCGAAATCATGACCGGAGACTTAGCGAGATTTCTCGTTCCTCGCCGTGAC
CCTGCAGCATTAGCTGCTAAGTTAGATGAAATGTTGGTATCACCACCATCTATGGCAGAAGTCGATATTTTAGCAAAAGT
ACAAGCAGCACGGATTGCTCAAGAATATTTGGCGTTGGTTAAATAA

Upstream 100 bases:

>100_bases
AGTTAGAAACGGCTTTGGCGCAGTGTGACTGCGTTAATGGTTTGGAGCTGGGGATGAATATTATCACAGCGCTATACCGT
AATAAATTTGGAGTTCATTG

Downstream 100 bases:

>100_bases
ACATTGAAGAGTTTGTGGGGAGAATTGTTGTGAGTGGGAACAACAAACGTTATTTATTGTATATTGCGCAGAACTATTCA
TATGCGATTTTGCGGCCGTT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MRIAIAIDSLGGGGAQKVMLTLAKEFTELGHEPHFFVMSDNTAFDIPQSLPVHICFAKKDRDFNRFWNLAPAVEKLTAKI
RSIEQTVGKFDLFLSNLDKTNRLMVKTNVSPLFVVVHASVEEELTRHAKLGPFAYLKKLLAKKALNGHHLVTVSEGIANE
IRQTKRIEPASIKCIYNPFEFDEIDHLSQQQAQGIPDSDYLIHIGRYVKQKRHDVLFQSIAKMKSQIPVVLLCHNPKKAR
KAAKKYGVESRVVIPGFQPNPFPWIKSAKALVLSSDFEGLPTVLIESLACGTPVVSTDCPHGPSEIMTGDLARFLVPRRD
PAALAAKLDEMLVSPPSMAEVDILAKVQAARIAQEYLALVK

Sequences:

>Translated_361_residues
MRIAIAIDSLGGGGAQKVMLTLAKEFTELGHEPHFFVMSDNTAFDIPQSLPVHICFAKKDRDFNRFWNLAPAVEKLTAKI
RSIEQTVGKFDLFLSNLDKTNRLMVKTNVSPLFVVVHASVEEELTRHAKLGPFAYLKKLLAKKALNGHHLVTVSEGIANE
IRQTKRIEPASIKCIYNPFEFDEIDHLSQQQAQGIPDSDYLIHIGRYVKQKRHDVLFQSIAKMKSQIPVVLLCHNPKKAR
KAAKKYGVESRVVIPGFQPNPFPWIKSAKALVLSSDFEGLPTVLIESLACGTPVVSTDCPHGPSEIMTGDLARFLVPRRD
PAALAAKLDEMLVSPPSMAEVDILAKVQAARIAQEYLALVK
>Mature_361_residues
MRIAIAIDSLGGGGAQKVMLTLAKEFTELGHEPHFFVMSDNTAFDIPQSLPVHICFAKKDRDFNRFWNLAPAVEKLTAKI
RSIEQTVGKFDLFLSNLDKTNRLMVKTNVSPLFVVVHASVEEELTRHAKLGPFAYLKKLLAKKALNGHHLVTVSEGIANE
IRQTKRIEPASIKCIYNPFEFDEIDHLSQQQAQGIPDSDYLIHIGRYVKQKRHDVLFQSIAKMKSQIPVVLLCHNPKKAR
KAAKKYGVESRVVIPGFQPNPFPWIKSAKALVLSSDFEGLPTVLIESLACGTPVVSTDCPHGPSEIMTGDLARFLVPRRD
PAALAAKLDEMLVSPPSMAEVDILAKVQAARIAQEYLALVK

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=195, Percent_Identity=27.1794871794872, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40077; Mature: 40077

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAIAIDSLGGGGAQKVMLTLAKEFTELGHEPHFFVMSDNTAFDIPQSLPVHICFAKKD
CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCC
RDFNRFWNLAPAVEKLTAKIRSIEQTVGKFDLFLSNLDKTNRLMVKTNVSPLFVVVHASV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCH
EEELTRHAKLGPFAYLKKLLAKKALNGHHLVTVSEGIANEIRQTKRIEPASIKCIYNPFE
HHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCEEEEEECCCC
FDEIDHLSQQQAQGIPDSDYLIHIGRYVKQKRHDVLFQSIAKMKSQIPVVLLCHNPKKAR
CCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
KAAKKYGVESRVVIPGFQPNPFPWIKSAKALVLSSDFEGLPTVLIESLACGTPVVSTDCP
HHHHHCCCCCEEEECCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
HGPSEIMTGDLARFLVPRRDPAALAAKLDEMLVSPPSMAEVDILAKVQAARIAQEYLALV
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MRIAIAIDSLGGGGAQKVMLTLAKEFTELGHEPHFFVMSDNTAFDIPQSLPVHICFAKKD
CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCC
RDFNRFWNLAPAVEKLTAKIRSIEQTVGKFDLFLSNLDKTNRLMVKTNVSPLFVVVHASV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCH
EEELTRHAKLGPFAYLKKLLAKKALNGHHLVTVSEGIANEIRQTKRIEPASIKCIYNPFE
HHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCEEEEEECCCC
FDEIDHLSQQQAQGIPDSDYLIHIGRYVKQKRHDVLFQSIAKMKSQIPVVLLCHNPKKAR
CCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
KAAKKYGVESRVVIPGFQPNPFPWIKSAKALVLSSDFEGLPTVLIESLACGTPVVSTDCP
HHHHHCCCCCEEEECCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
HGPSEIMTGDLARFLVPRRDPAALAAKLDEMLVSPPSMAEVDILAKVQAARIAQEYLALV
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]