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The map label for this gene is uidR [C]

Identifier: 157959938

GI number: 157959938

Start: 121550

End: 122191

Strand: Reverse

Name: uidR [C]

Synonym: Spea_0108

Alternate gene names: 157959938

Gene position: 122191-121550 (Counterclockwise)

Preceding gene: 157959940

Following gene: 157959937

Centisome position: 2.36

GC content: 42.37

Gene sequence:

>642_bases
ATGAAGACCCGTGACAAAATCGTACAAGCCAGTTTAGAGCTTTTTAATGAACATGGCGAAAGAACAATCACAACCAATCA
TATCGCCGCCCACCTAAATATTAGCCCTGGTAACCTCTACTACCACTTTCGCAATAAAGAAGACATCATACGTTCGATTT
TTGGTCTTTATGAGCAACATCTCGAGTCTGGTTTTCAGCCTTATGTCGATAAAGAGGTCGATGTCGATCTATTAGTCGGC
TATTTCGATGCGATGTTTTATACCCTTTGGCAATTCCGCTTTATGTACGCCAATCTCGCCGATATTCTCAGCCGCGATGA
AACGCTAAAAAACCGCTACCTTAAGGCTCAGCAAGATGTGCTCGAACGCTCAAGCGGCGTACTAGAAAAATTAACTCAAG
ATGGCTTCTTAGCGATTAATTCTGAAGATATTAAGCCTCTAGCCGACACCATAAAGATGCTAGTCAGCTTTTGGATCAGC
TATAAGCTCACCCAAACTCAGTCAAACATCGGCTCAATCACCAAAGAGTCACTATATGAAGGCTTATTGCGGGTGATTAT
GCTATTTAAATCCTATGCGACACCAAGCTCACAGGCGACTTTTTTAAGACTAGAAGAGCACTACCGCTCACAAATGCAAT
AA

Upstream 100 bases:

>100_bases
ACACAGGTGTAATTCAAACGGAATAGGCATAATAGAGGCTATTAAGCGGTCAATTACTTGCCGAATTAATTATACTGGAT
ATTAATCATTTAGGATGAAT

Downstream 100 bases:

>100_bases
CAGCTCACTTGGGCCTAGACGCATGAACTAGCTTTCATGCGCTAGCTTTAGTGACTCTCACTATCCCCATTATCTCCTCG
ACTAAAAGCACTTGAAAGTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKTRDKIVQASLELFNEHGERTITTNHIAAHLNISPGNLYYHFRNKEDIIRSIFGLYEQHLESGFQPYVDKEVDVDLLVG
YFDAMFYTLWQFRFMYANLADILSRDETLKNRYLKAQQDVLERSSGVLEKLTQDGFLAINSEDIKPLADTIKMLVSFWIS
YKLTQTQSNIGSITKESLYEGLLRVIMLFKSYATPSSQATFLRLEEHYRSQMQ

Sequences:

>Translated_213_residues
MKTRDKIVQASLELFNEHGERTITTNHIAAHLNISPGNLYYHFRNKEDIIRSIFGLYEQHLESGFQPYVDKEVDVDLLVG
YFDAMFYTLWQFRFMYANLADILSRDETLKNRYLKAQQDVLERSSGVLEKLTQDGFLAINSEDIKPLADTIKMLVSFWIS
YKLTQTQSNIGSITKESLYEGLLRVIMLFKSYATPSSQATFLRLEEHYRSQMQ
>Mature_213_residues
MKTRDKIVQASLELFNEHGERTITTNHIAAHLNISPGNLYYHFRNKEDIIRSIFGLYEQHLESGFQPYVDKEVDVDLLVG
YFDAMFYTLWQFRFMYANLADILSRDETLKNRYLKAQQDVLERSSGVLEKLTQDGFLAINSEDIKPLADTIKMLVSFWIS
YKLTQTQSNIGSITKESLYEGLLRVIMLFKSYATPSSQATFLRLEEHYRSQMQ

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24874; Mature: 24874

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRDKIVQASLELFNEHGERTITTNHIAAHLNISPGNLYYHFRNKEDIIRSIFGLYEQH
CCCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
LESGFQPYVDKEVDVDLLVGYFDAMFYTLWQFRFMYANLADILSRDETLKNRYLKAQQDV
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERSSGVLEKLTQDGFLAINSEDIKPLADTIKMLVSFWISYKLTQTQSNIGSITKESLYE
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLRVIMLFKSYATPSSQATFLRLEEHYRSQMQ
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTRDKIVQASLELFNEHGERTITTNHIAAHLNISPGNLYYHFRNKEDIIRSIFGLYEQH
CCCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
LESGFQPYVDKEVDVDLLVGYFDAMFYTLWQFRFMYANLADILSRDETLKNRYLKAQQDV
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERSSGVLEKLTQDGFLAINSEDIKPLADTIKMLVSFWISYKLTQTQSNIGSITKESLYE
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLRVIMLFKSYATPSSQATFLRLEEHYRSQMQ
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA