| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157959925
Identifier: 157959925
GI number: 157959925
Start: 105266
End: 107065
Strand: Reverse
Name: 157959925
Synonym: Spea_0095
Alternate gene names: NA
Gene position: 107065-105266 (Counterclockwise)
Preceding gene: 157959926
Following gene: 157959924
Centisome position: 2.07
GC content: 50.22
Gene sequence:
>1800_bases ATGGACATACTCATGTATAAATACCTACTTCCCTCAGTACTAGTCTTGGGTCTCAGCGCCTGCCAAGCCACGACATCAAC GGCGCCTCAGTCAGATGTCAGCACTCAACAAGTCGCAACCCACAATCAACTCCAGTCCATTATTGATGCCGCCTGGCAAA CATCGCTAGATGCTAGCCCTAGTTTTGCCTACTCTCTAGGTGATAAGACGGCCGCCGGTAAACTGCAAGACCTGTCGCCA ACGGCACTCGAAGCAATGGATCAGCGCAAACAGCAGTTACTCAAACAATTGCTGCAGATAGACAGCAGCCGCTACAGCAA AGAAGACGCTATCAACGCACAGATACTGCGCGACCAACTGCAAAACGATGTTGACCAATATCGCTATAAAGATCACTACA TGCCAATCTCGGCGGAAGGCGGTTTTCATGCTTATATCGCCTCGATTGCCAAGGGGCGCTTTGCCAAAGTCGAGGACTAC CACAACTACATAAAGCAGCTGCAAGCACTGCCTGAGTATTTCCAGCAGCAGACCTATTGGTTAAACCAAGGTCTAGATGC AGGCATCACCCCAGCTAAGGCCACCCTCAAAGGGTTTGAAACCAGCATCAGCGCCTTTATCGTGCCAGTAGAAGACAGTG GTTATTTCAAACCCTTCACTCAGTATCCAGCGCATTTCAGTGAGGCAGAAAAAGCCGAACTAACTAAACAGGGCCGCGCC TTAGTGCAACACACTGTACTTCCTCAGTACCAAGCCTTCTTCGACTTCATCACCAAGGAATATATCCCAAACACTCGTGA GAGTATTGCGACCTACGACCTTCCCGATGGTGAAGCCTTCTATGAGAATCGCGTGCGTTATTACACCACCCTAGATATGA CCTCTGATGAGGTGCACCAGCTGGGCTTACAAGAAGTTAAGCGCATTCGAGGTGAGATGCAGCAGATCATCGAACAGGTG GGGTTCGAAGGTAGCTTTGCCGAGTTCCTACACTTTTTAAGAACCGACCCACAGTTCTACCCTGAGACAGCGGAAGAGTT ACTCAAGGAAGCGGCCTATATCGCCAAGCAAGCCGATGCCATGCTGCCTAAGTATTTTGGTAAGCTTCCACGCCAACCTT ATGGAATCGAACCCGTTCCCGCCGAAATCGCGCCTAAATACACCACGGGGCGTTACTCAGGTTCAAATCGCGCAGATGAA GCCGGTTATTACTGGGTCAACACCTACGCGCTAGATAAGCGCCCACTGTACGAGATGGAAGCACTCACTCTGCATGAAGC CGTACCCGGCCACCACCTTCAAATTGCACTTAATCAGGAGTTAACTAACCTGCCCGACTTCCGTCGTTACAGCTATATCT CGGCGTTTGGTGAAGGTTGGGGCCTCTACTCTGAGTATCTGGGGTTAGAGGCTGGCTTCTACCAAGACCCTTATAGTAAC TTTGGCCGTTTGACCTATGAAATGTGGCGCGCAGCGCGTCTCGTAGTGGATACCGGCATGCACGCCAAAGGTTGGTCTCG CCAACAAGCAATCGACTTTATGGCCAGCAACACCGCACTATCGATGCATAACGTCAATACAGAGATTGACCGCTACATCA ACTGGCCAGGACAAGCCTTGTCATACAAGATTGGTGAGCTGACAATTAAACGTTTGCGAGCTCAAGCAGAAGTAGAACTG GGCGAGAACTTCGATATCCGCGCCTTCCATGACGCTATCTTAGCCAATGGTTCTGTGCCTATGTCAGTACTGGAGCAGCA GATAAACGACTTTATCGCAACTCAAAAGGTCGCCATCTAG
Upstream 100 bases:
>100_bases CACCAGCTTCACGTTTAATCTTTTGTCACATTTCGTTTAATTTTCATCCGTGACCTTTGGCAGCGGTAACGGTATATTCA AGCTGATAATAAAAACAATA
Downstream 100 bases:
>100_bases TCACTGCCACCACGGCCTCATACAGGATAAAGTGAATGGCATTAGCCGTAATGCCATTCACTTAACGACGTACTCAAAAA ACTTATGACTTTAAAAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MDILMYKYLLPSVLVLGLSACQATTSTAPQSDVSTQQVATHNQLQSIIDAAWQTSLDASPSFAYSLGDKTAAGKLQDLSP TALEAMDQRKQQLLKQLLQIDSSRYSKEDAINAQILRDQLQNDVDQYRYKDHYMPISAEGGFHAYIASIAKGRFAKVEDY HNYIKQLQALPEYFQQQTYWLNQGLDAGITPAKATLKGFETSISAFIVPVEDSGYFKPFTQYPAHFSEAEKAELTKQGRA LVQHTVLPQYQAFFDFITKEYIPNTRESIATYDLPDGEAFYENRVRYYTTLDMTSDEVHQLGLQEVKRIRGEMQQIIEQV GFEGSFAEFLHFLRTDPQFYPETAEELLKEAAYIAKQADAMLPKYFGKLPRQPYGIEPVPAEIAPKYTTGRYSGSNRADE AGYYWVNTYALDKRPLYEMEALTLHEAVPGHHLQIALNQELTNLPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPYSN FGRLTYEMWRAARLVVDTGMHAKGWSRQQAIDFMASNTALSMHNVNTEIDRYINWPGQALSYKIGELTIKRLRAQAEVEL GENFDIRAFHDAILANGSVPMSVLEQQINDFIATQKVAI
Sequences:
>Translated_599_residues MDILMYKYLLPSVLVLGLSACQATTSTAPQSDVSTQQVATHNQLQSIIDAAWQTSLDASPSFAYSLGDKTAAGKLQDLSP TALEAMDQRKQQLLKQLLQIDSSRYSKEDAINAQILRDQLQNDVDQYRYKDHYMPISAEGGFHAYIASIAKGRFAKVEDY HNYIKQLQALPEYFQQQTYWLNQGLDAGITPAKATLKGFETSISAFIVPVEDSGYFKPFTQYPAHFSEAEKAELTKQGRA LVQHTVLPQYQAFFDFITKEYIPNTRESIATYDLPDGEAFYENRVRYYTTLDMTSDEVHQLGLQEVKRIRGEMQQIIEQV GFEGSFAEFLHFLRTDPQFYPETAEELLKEAAYIAKQADAMLPKYFGKLPRQPYGIEPVPAEIAPKYTTGRYSGSNRADE AGYYWVNTYALDKRPLYEMEALTLHEAVPGHHLQIALNQELTNLPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPYSN FGRLTYEMWRAARLVVDTGMHAKGWSRQQAIDFMASNTALSMHNVNTEIDRYINWPGQALSYKIGELTIKRLRAQAEVEL GENFDIRAFHDAILANGSVPMSVLEQQINDFIATQKVAI >Mature_599_residues MDILMYKYLLPSVLVLGLSACQATTSTAPQSDVSTQQVATHNQLQSIIDAAWQTSLDASPSFAYSLGDKTAAGKLQDLSP TALEAMDQRKQQLLKQLLQIDSSRYSKEDAINAQILRDQLQNDVDQYRYKDHYMPISAEGGFHAYIASIAKGRFAKVEDY HNYIKQLQALPEYFQQQTYWLNQGLDAGITPAKATLKGFETSISAFIVPVEDSGYFKPFTQYPAHFSEAEKAELTKQGRA LVQHTVLPQYQAFFDFITKEYIPNTRESIATYDLPDGEAFYENRVRYYTTLDMTSDEVHQLGLQEVKRIRGEMQQIIEQV GFEGSFAEFLHFLRTDPQFYPETAEELLKEAAYIAKQADAMLPKYFGKLPRQPYGIEPVPAEIAPKYTTGRYSGSNRADE AGYYWVNTYALDKRPLYEMEALTLHEAVPGHHLQIALNQELTNLPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPYSN FGRLTYEMWRAARLVVDTGMHAKGWSRQQAIDFMASNTALSMHNVNTEIDRYINWPGQALSYKIGELTIKRLRAQAEVEL GENFDIRAFHDAILANGSVPMSVLEQQINDFIATQKVAI
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68081; Mature: 68081
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILMYKYLLPSVLVLGLSACQATTSTAPQSDVSTQQVATHNQLQSIIDAAWQTSLDASP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC SFAYSLGDKTAAGKLQDLSPTALEAMDQRKQQLLKQLLQIDSSRYSKEDAINAQILRDQL CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QNDVDQYRYKDHYMPISAEGGFHAYIASIAKGRFAKVEDYHNYIKQLQALPEYFQQQTYW HHHHHHHHHHHCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LNQGLDAGITPAKATLKGFETSISAFIVPVEDSGYFKPFTQYPAHFSEAEKAELTKQGRA HHCCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHH LVQHTVLPQYQAFFDFITKEYIPNTRESIATYDLPDGEAFYENRVRYYTTLDMTSDEVHQ HHHHHHCHHHHHHHHHHHHHHCCCCHHHCEECCCCCCHHHHHCCEEEEEEECCCHHHHHH LGLQEVKRIRGEMQQIIEQVGFEGSFAEFLHFLRTDPQFYPETAEELLKEAAYIAKQADA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH MLPKYFGKLPRQPYGIEPVPAEIAPKYTTGRYSGSNRADEAGYYWVNTYALDKRPLYEME HHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHH ALTLHEAVPGHHLQIALNQELTNLPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPYSN HHHHHHCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHH FGRLTYEMWRAARLVVDTGMHAKGWSRQQAIDFMASNTALSMHNVNTEIDRYINWPGQAL HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHH SYKIGELTIKRLRAQAEVELGENFDIRAFHDAILANGSVPMSVLEQQINDFIATQKVAI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDILMYKYLLPSVLVLGLSACQATTSTAPQSDVSTQQVATHNQLQSIIDAAWQTSLDASP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC SFAYSLGDKTAAGKLQDLSPTALEAMDQRKQQLLKQLLQIDSSRYSKEDAINAQILRDQL CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QNDVDQYRYKDHYMPISAEGGFHAYIASIAKGRFAKVEDYHNYIKQLQALPEYFQQQTYW HHHHHHHHHHHCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LNQGLDAGITPAKATLKGFETSISAFIVPVEDSGYFKPFTQYPAHFSEAEKAELTKQGRA HHCCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHH LVQHTVLPQYQAFFDFITKEYIPNTRESIATYDLPDGEAFYENRVRYYTTLDMTSDEVHQ HHHHHHCHHHHHHHHHHHHHHCCCCHHHCEECCCCCCHHHHHCCEEEEEEECCCHHHHHH LGLQEVKRIRGEMQQIIEQVGFEGSFAEFLHFLRTDPQFYPETAEELLKEAAYIAKQADA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH MLPKYFGKLPRQPYGIEPVPAEIAPKYTTGRYSGSNRADEAGYYWVNTYALDKRPLYEME HHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHH ALTLHEAVPGHHLQIALNQELTNLPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPYSN HHHHHHCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHH FGRLTYEMWRAARLVVDTGMHAKGWSRQQAIDFMASNTALSMHNVNTEIDRYINWPGQAL HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCHHH SYKIGELTIKRLRAQAEVELGENFDIRAFHDAILANGSVPMSVLEQQINDFIATQKVAI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA