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The map label for this gene is flgC [H]

Identifier: 157959904

GI number: 157959904

Start: 86478

End: 86897

Strand: Reverse

Name: flgC [H]

Synonym: Spea_0074

Alternate gene names: 157959904

Gene position: 86897-86478 (Counterclockwise)

Preceding gene: 157959905

Following gene: 157959903

Centisome position: 1.68

GC content: 50.24

Gene sequence:

>420_bases
ATGTCATTCGCAGAAATCTATCAAATTGCCGGTGCAGGCATGAACGCGCAAACGATTCGCCTCAATACCGTTGCCAGTAA
CCTTGCCAATGCTGGCGCAGCAGCCGAAAGCCCAGATCAAGCATTTCGCGCGTTAAAGCCTGTGTTCTCCACCATCTACA
AGCAAACCCAAGAGGGAGAACTTGCAGGAGCACACGTCGAAGTGTCGGCCATAGTACAAAGCGATGCGCCGCTCGATCTA
CGTTACGAACCAAACCATCCCTTTGCCGATGAGCAAGGCTATGTCGCCTACTCAAACGTTAATACCGTAGAAGAGATGGC
CGACATGATGGCGGCTAGCCGCTCTTTTGAAACCAGCGTTGAAGTAATGAATCGCGCTCGCTCAATGCAGCAAGGTTTAT
TACAACTAGGAACCAAATAA

Upstream 100 bases:

>100_bases
GATACTCACAAAACTCCATGGATTACCAAACTAGCCTGACCTTTCTCAACATGAAGATTTCAGGATTACGTACCGCCATC
GAAGGTAAATAACTACAGCC

Downstream 100 bases:

>100_bases
TGAATGTGACAGACGTAAGTAACACGAGTGGCGCTACAGATAACATACAGAACTCTCCGGGTAACGATGCCGCTTCAATC
AAAAACGAATTCATGACATT

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSFAEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEGELAGAHVEVSAIVQSDAPLDL
RYEPNHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRARSMQQGLLQLGTK

Sequences:

>Translated_139_residues
MSFAEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEGELAGAHVEVSAIVQSDAPLDL
RYEPNHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRARSMQQGLLQLGTK
>Mature_138_residues
SFAEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEGELAGAHVEVSAIVQSDAPLDLR
YEPNHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRARSMQQGLLQLGTK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=137, Percent_Identity=42.3357664233577, Blast_Score=103, Evalue=4e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15021; Mature: 14890

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEGE
CCHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
LAGAHVEVSAIVQSDAPLDLRYEPNHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSV
CCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHH
EVMNRARSMQQGLLQLGTK
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFAEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEGE
CHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
LAGAHVEVSAIVQSDAPLDLRYEPNHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSV
CCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHH
EVMNRARSMQQGLLQLGTK
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]