| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is flgB [H]
Identifier: 157959905
GI number: 157959905
Start: 86906
End: 87256
Strand: Reverse
Name: flgB [H]
Synonym: Spea_0075
Alternate gene names: 157959905
Gene position: 87256-86906 (Counterclockwise)
Preceding gene: 157959909
Following gene: 157959904
Centisome position: 1.69
GC content: 46.15
Gene sequence:
>351_bases ATGGCTATCAACCTCGATGCCGCATTAGGTGTACACCCACACACGTTAGACTTCAGAGTCGAGCGCAGCAAAATGCTGGC AGGTAATTTAGCCAACGCAGAAACTCCCGGCTACAAGGCTAGAGATCTGGACTTTAATGCTGTGATGACTCAGCTCAACT CGGGAATGACACCTAACCAAGATTACCAAGTTGGTTACCGTATTCCACACCAGACTTCCGCAGATCAAAACACCGTAGAG TTAAGTTTAGAGCAGGCGAGATACTCACAAAACTCCATGGATTACCAAACTAGCCTGACCTTTCTCAACATGAAGATTTC AGGATTACGTACCGCCATCGAAGGTAAATAA
Upstream 100 bases:
>100_bases ATACAGTGTAATTACTTGATAAATAGAGATTAAGCATCTTGGCACATTAATTGGATAATAGGGAAAATAATAAACAGCAC ATACCATACTAGGAGTTGCA
Downstream 100 bases:
>100_bases CTACAGCCATGTCATTCGCAGAAATCTATCAAATTGCCGGTGCAGGCATGAACGCGCAAACGATTCGCCTCAATACCGTT GCCAGTAACCTTGCCAATGC
Product: flagellar basal body rod protein FlgB
Products: NA
Alternate protein names: Putative proximal rod protein [H]
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAINLDAALGVHPHTLDFRVERSKMLAGNLANAETPGYKARDLDFNAVMTQLNSGMTPNQDYQVGYRIPHQTSADQNTVE LSLEQARYSQNSMDYQTSLTFLNMKISGLRTAIEGK
Sequences:
>Translated_116_residues MAINLDAALGVHPHTLDFRVERSKMLAGNLANAETPGYKARDLDFNAVMTQLNSGMTPNQDYQVGYRIPHQTSADQNTVE LSLEQARYSQNSMDYQTSLTFLNMKISGLRTAIEGK >Mature_115_residues AINLDAALGVHPHTLDFRVERSKMLAGNLANAETPGYKARDLDFNAVMTQLNSGMTPNQDYQVGYRIPHQTSADQNTVEL SLEQARYSQNSMDYQTSLTFLNMKISGLRTAIEGK
Specific function: Unknown
COG id: COG1815
COG function: function code N; Flagellar basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787313, Length=135, Percent_Identity=34.8148148148148, Blast_Score=82, Evalue=1e-17,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR006300 [H]
Pfam domain/function: PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 12910; Mature: 12778
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINLDAALGVHPHTLDFRVERSKMLAGNLANAETPGYKARDLDFNAVMTQLNSGMTPNQ CEEECCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCC DYQVGYRIPHQTSADQNTVELSLEQARYSQNSMDYQTSLTFLNMKISGLRTAIEGK CCEEEEECCCCCCCCCCEEEEEEHHHHCCCCCCCCEEEEEEEEEEECCEEEEECCC >Mature Secondary Structure AINLDAALGVHPHTLDFRVERSKMLAGNLANAETPGYKARDLDFNAVMTQLNSGMTPNQ EEECCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCC DYQVGYRIPHQTSADQNTVELSLEQARYSQNSMDYQTSLTFLNMKISGLRTAIEGK CCEEEEECCCCCCCCCCEEEEEEHHHHCCCCCCCCEEEEEEEEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2129540; 2404955; 11677609; 8200538; 2181149 [H]