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The map label for this gene is epsM [H]

Identifier: 157959880

GI number: 157959880

Start: 66316

End: 66960

Strand: Direct

Name: epsM [H]

Synonym: Spea_0050

Alternate gene names: 157959880

Gene position: 66316-66960 (Clockwise)

Preceding gene: 157959879

Following gene: 157959881

Centisome position: 1.28

GC content: 41.86

Gene sequence:

>645_bases
TTGAATAAAGTTAAGGCCAAGCCCCTTGTTATTCTCGGTGGTGGAGGGCATGCCAGTGTATTGGTTGATATCTTGCTTTC
ACAACAACGTGAGATAGTCGCAATTGTCAGCCCTGAAAATATAAGTTCACGTCTTGCTTTTTCGGGTTTAAAACACATGA
ACAATGACCAAGATGTATTGGCGTTTTCACCTGCTGAAGTTAGGCTGGTTAATGGTATAGGCATGCTACCAAATTCAGCT
TTAAAGCGTAATATTAATGAATACTTTCTTGATCTTGGCTATCGTTTTGAAACGATAATTTCGAATCAGGCGTATATCTC
TTCCTTTGCGAGCATTGAACATGGAGCACAAGTTCTTCCGGGGGCCATTATACAACCCGGTGCGGTTATTGGCGCGCATA
GTATTATTAATAGCGGGGCAATAATTGAACATGATTGCCGGGTTGGCCAATATAACCATATAGCCCCAAGGGCGACGCTA
TGTGGACAGGTTACGACTCAGCATGATGTTTTTATTGGCGCTGGCGCAACGATTATTCAAAACATTACGCTTGGTCACGG
CTCTGTTATTGGAGCCGGTGCTATCGTTACTAAAAATGTATCATCAGGAAAAGTTTGCTATTCAAGTCGAATAATAATGA
ATTGA

Upstream 100 bases:

>100_bases
CTTACGATAAAGCGCCCTGGTTCAGGTATGTCACCATATATGTATTGGAGGTTACTGAATAAGCCCGCAAGCAAAAACTA
CCAAGCTGGGGACTTGATCT

Downstream 100 bases:

>100_bases
AAATAGCTAAAGGTTAATCATGAGTAACTCTTGGAAAAATATTTTAATAAAACCTGAGGCGACAATACTTGATGCTCTTG
GGGTTATCGATAATGAAGCA

Product: sialic acid biosynthesis protein NeuD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNKVKAKPLVILGGGGHASVLVDILLSQQREIVAIVSPENISSRLAFSGLKHMNNDQDVLAFSPAEVRLVNGIGMLPNSA
LKRNINEYFLDLGYRFETIISNQAYISSFASIEHGAQVLPGAIIQPGAVIGAHSIINSGAIIEHDCRVGQYNHIAPRATL
CGQVTTQHDVFIGAGATIIQNITLGHGSVIGAGAIVTKNVSSGKVCYSSRIIMN

Sequences:

>Translated_214_residues
MNKVKAKPLVILGGGGHASVLVDILLSQQREIVAIVSPENISSRLAFSGLKHMNNDQDVLAFSPAEVRLVNGIGMLPNSA
LKRNINEYFLDLGYRFETIISNQAYISSFASIEHGAQVLPGAIIQPGAVIGAHSIINSGAIIEHDCRVGQYNHIAPRATL
CGQVTTQHDVFIGAGATIIQNITLGHGSVIGAGAIVTKNVSSGKVCYSSRIIMN
>Mature_214_residues
MNKVKAKPLVILGGGGHASVLVDILLSQQREIVAIVSPENISSRLAFSGLKHMNNDQDVLAFSPAEVRLVNGIGMLPNSA
LKRNINEYFLDLGYRFETIISNQAYISSFASIEHGAQVLPGAIIQPGAVIGAHSIINSGAIIEHDCRVGQYNHIAPRATL
CGQVTTQHDVFIGAGATIIQNITLGHGSVIGAGAIVTKNVSSGKVCYSSRIIMN

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018357
- InterPro:   IPR013817
- InterPro:   IPR020019
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22637; Mature: 22637

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVKAKPLVILGGGGHASVLVDILLSQQREIVAIVSPENISSRLAFSGLKHMNNDQDVL
CCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEE
AFSPAEVRLVNGIGMLPNSALKRNINEYFLDLGYRFETIISNQAYISSFASIEHGAQVLP
EECCCEEEEEECCCCCCCHHHHHCHHHHHHHCCCEEEEHHCCHHHHHHHHHHHCCCHHCC
GAIIQPGAVIGAHSIINSGAIIEHDCRVGQYNHIAPRATLCGQVTTQHDVFIGAGATIIQ
CCCCCCCCEEEHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEEEECCHHHEE
NITLGHGSVIGAGAIVTKNVSSGKVCYSSRIIMN
EEECCCCCEEECCEEEEECCCCCCEEEECEEECC
>Mature Secondary Structure
MNKVKAKPLVILGGGGHASVLVDILLSQQREIVAIVSPENISSRLAFSGLKHMNNDQDVL
CCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEE
AFSPAEVRLVNGIGMLPNSALKRNINEYFLDLGYRFETIISNQAYISSFASIEHGAQVLP
EECCCEEEEEECCCCCCCHHHHHCHHHHHHHCCCEEEEHHCCHHHHHHHHHHHCCCHHCC
GAIIQPGAVIGAHSIINSGAIIEHDCRVGQYNHIAPRATLCGQVTTQHDVFIGAGATIIQ
CCCCCCCCEEEHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEEEECCHHHEE
NITLGHGSVIGAGAIVTKNVSSGKVCYSSRIIMN
EEECCCCCEEECCEEEEECCCCCCEEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]