| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is mpg1 [H]
Identifier: 157959881
GI number: 157959881
Start: 66980
End: 68035
Strand: Direct
Name: mpg1 [H]
Synonym: Spea_0051
Alternate gene names: 157959881
Gene position: 66980-68035 (Clockwise)
Preceding gene: 157959880
Following gene: 157959882
Centisome position: 1.29
GC content: 37.88
Gene sequence:
>1056_bases ATGAGTAACTCTTGGAAAAATATTTTAATAAAACCTGAGGCGACAATACTTGATGCTCTTGGGGTTATCGATAATGAAGC ATTGCAAGTTGCCTTAGTAGTTAATAGTGAACAAAAACTATTAGGTGTAATAACCGATGGTGATATTCGTCGGGGGATAC TTAATAATTTGTCATTAGACACTCCCGTCACCGAAATAATGAATTGCTCACCAATTACAGCAGAGATGAGCTCAACGAAA GAGCAATTGACACAATTAATGGAAAGTAAGAGCATACTTGCGATTCCGTTAATTGAAAACGGCAAAGTTGTTGGTTTAGA AACATTACAGAGATTACTTGAAACAACAATCTATCAAAACCCTGTATTTATAATGGCGGGAGGGTTTGGTACTCGCTTAA GGCCTTTAACAGATTCCTGTCCAAAACCGATGTTGAAAGTTGGTGACAAGCCAATATTGGATATATTAATTACTAACTTT ATTAAAGCTGGTTTTGTCAATTTCTATATATCAACACATTATATGGCTGAGCAAATTCGAAGCTACTTCGGTGATGGTAG TGAGTTAGGAGTGAAAATTCATTATATTCATGAAGAGGCTCCATTAGGTACGGGGGGAGCACTTGGTTTACTGCCTGACG ACTTACCAAAAGGCTTACCTTTGATCATGGTGAATGGAGATGTGCTCACCAAGGTTGATTTTGAAAGGCTATTAGATTTT CATAATGAGCATCAGGCCGATGCCACCATGTGTGTACGAAAGTATGATTATCAAGTTCCCTATGGCGTTGTTAGTGGCGA AGGGAACAAGGTTACCTGCATGGTTGAAAAGCCGGTTCAACATTTTTTTGTTAACGCAGGCATTTATGTCATATCTCCAT GTGTGATTGATTCTGTGCCTAAAGATTATCATATCGATATGCCTACTCTATTGGATCAGCATATGAGTGAGCGTGAAAAC GTTTTAATGTTTCCGGTTCATGAATATTGGCTTGATATTGGTCGAATGGCTGATTTTGAACGAGCTCAAACAGATATTTT AAGTTTAGGTTTGTAA
Upstream 100 bases:
>100_bases GTTATTGGAGCCGGTGCTATCGTTACTAAAAATGTATCATCAGGAAAAGTTTGCTATTCAAGTCGAATAATAATGAATTG AAAATAGCTAAAGGTTAATC
Downstream 100 bases:
>100_bases TGATTAAAAATAAACGAGTGTTAGCTCTTATTCCCGCAAGAGGTGGAAGTAAGAGGTTACCTCGAAAAAATATATTACCT TTGGCAGGCATACCTTTAAT
Product: nucleotidyl transferase
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSNSWKNILIKPEATILDALGVIDNEALQVALVVNSEQKLLGVITDGDIRRGILNNLSLDTPVTEIMNCSPITAEMSSTK EQLTQLMESKSILAIPLIENGKVVGLETLQRLLETTIYQNPVFIMAGGFGTRLRPLTDSCPKPMLKVGDKPILDILITNF IKAGFVNFYISTHYMAEQIRSYFGDGSELGVKIHYIHEEAPLGTGGALGLLPDDLPKGLPLIMVNGDVLTKVDFERLLDF HNEHQADATMCVRKYDYQVPYGVVSGEGNKVTCMVEKPVQHFFVNAGIYVISPCVIDSVPKDYHIDMPTLLDQHMSEREN VLMFPVHEYWLDIGRMADFERAQTDILSLGL
Sequences:
>Translated_351_residues MSNSWKNILIKPEATILDALGVIDNEALQVALVVNSEQKLLGVITDGDIRRGILNNLSLDTPVTEIMNCSPITAEMSSTK EQLTQLMESKSILAIPLIENGKVVGLETLQRLLETTIYQNPVFIMAGGFGTRLRPLTDSCPKPMLKVGDKPILDILITNF IKAGFVNFYISTHYMAEQIRSYFGDGSELGVKIHYIHEEAPLGTGGALGLLPDDLPKGLPLIMVNGDVLTKVDFERLLDF HNEHQADATMCVRKYDYQVPYGVVSGEGNKVTCMVEKPVQHFFVNAGIYVISPCVIDSVPKDYHIDMPTLLDQHMSEREN VLMFPVHEYWLDIGRMADFERAQTDILSLGL >Mature_350_residues SNSWKNILIKPEATILDALGVIDNEALQVALVVNSEQKLLGVITDGDIRRGILNNLSLDTPVTEIMNCSPITAEMSSTKE QLTQLMESKSILAIPLIENGKVVGLETLQRLLETTIYQNPVFIMAGGFGTRLRPLTDSCPKPMLKVGDKPILDILITNFI KAGFVNFYISTHYMAEQIRSYFGDGSELGVKIHYIHEEAPLGTGGALGLLPDDLPKGLPLIMVNGDVLTKVDFERLLDFH NEHQADATMCVRKYDYQVPYGVVSGEGNKVTCMVEKPVQHFFVNAGIYVISPCVIDSVPKDYHIDMPTLLDQHMSERENV LMFPVHEYWLDIGRMADFERAQTDILSLGL
Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=228, Percent_Identity=32.8947368421053, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI11761619, Length=228, Percent_Identity=32.8947368421053, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI133931050, Length=235, Percent_Identity=31.063829787234, Blast_Score=121, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6320148, Length=232, Percent_Identity=33.6206896551724, Blast_Score=121, Evalue=2e-28, Organism=Drosophila melanogaster, GI21355443, Length=227, Percent_Identity=33.920704845815, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24644084, Length=227, Percent_Identity=33.920704845815, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24653912, Length=202, Percent_Identity=28.7128712871287, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 39039; Mature: 38908
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSWKNILIKPEATILDALGVIDNEALQVALVVNSEQKLLGVITDGDIRRGILNNLSLD CCCCCCEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHCCCCC TPVTEIMNCSPITAEMSSTKEQLTQLMESKSILAIPLIENGKVVGLETLQRLLETTIYQN CCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEECHHHHHHHHHHHHHCC PVFIMAGGFGTRLRPLTDSCPKPMLKVGDKPILDILITNFIKAGFVNFYISTHYMAEQIR CEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHH SYFGDGSELGVKIHYIHEEAPLGTGGALGLLPDDLPKGLPLIMVNGDVLTKVDFERLLDF HHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHCCHHHHHHH HNEHQADATMCVRKYDYQVPYGVVSGEGNKVTCMVEKPVQHFFVNAGIYVISPCVIDSVP HCCCCHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCHHHHHHHCCEEEEEHHHHCCCC KDYHIDMPTLLDQHMSERENVLMFPVHEYWLDIGRMADFERAQTDILSLGL CCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHCCC >Mature Secondary Structure SNSWKNILIKPEATILDALGVIDNEALQVALVVNSEQKLLGVITDGDIRRGILNNLSLD CCCCCEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHCCCCC TPVTEIMNCSPITAEMSSTKEQLTQLMESKSILAIPLIENGKVVGLETLQRLLETTIYQN CCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEECHHHHHHHHHHHHHCC PVFIMAGGFGTRLRPLTDSCPKPMLKVGDKPILDILITNFIKAGFVNFYISTHYMAEQIR CEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHH SYFGDGSELGVKIHYIHEEAPLGTGGALGLLPDDLPKGLPLIMVNGDVLTKVDFERLLDF HHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHCCHHHHHHH HNEHQADATMCVRKYDYQVPYGVVSGEGNKVTCMVEKPVQHFFVNAGIYVISPCVIDSVP HCCCCHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCHHHHHHHCCEEEEEHHHHCCCC KDYHIDMPTLLDQHMSERENVLMFPVHEYWLDIGRMADFERAQTDILSLGL CCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]