Click here to switch to the map view.

The map label for this gene is 157959876

Identifier: 157959876

GI number: 157959876

Start: 61701

End: 62882

Strand: Direct

Name: 157959876

Synonym: Spea_0046

Alternate gene names: NA

Gene position: 61701-62882 (Clockwise)

Preceding gene: 157959871

Following gene: 157959877

Centisome position: 1.19

GC content: 39.0

Gene sequence:

>1182_bases
ATGCTATCGCTAATAGGTCGAAACAATAAGCTGTTTGCTGCAGATATAAAGTGCTATGAAGCAGAGTTAAGCCATATTGT
CTCCACATCATCATTTCTCATTCTTGGTGGGGCAGGTTCTATCGGGCAAGCCGTGACGAAAGAGATCTTTAAACGCCAGC
CCAAAAAGCTTCATGTTGTCGATATCAGTGAAAACAATATGGTCGAGCTTGTTAGGGATTTGCGAAGCTCTTTTGGTTAC
ATTGATGGTGAATTTAACACCTATGCATTAGATATTGGTTCAATTGAATATGATGCCTTTATTAAAGCTGATGGACATTA
TGACTATGTATTAAACCTTTCCGCCCTTAAGCATGTTCGTAGTGAAAAAGATCCTTTTACCTTGATGCGTATGATTGATG
TCAACATTTTTAATACTGACAAAACTGTACAGCAGGCGATAGATTCAGGTGCTAAGAAGTACTTTTGTGTGTCTACCGAT
AAGGCCGCTAACCCGGTTAATATGATGGGGGCATCAAAACGTATTATGGAGATGTTCCTGATGCGCAAGAGTGAGCATAT
CGCCATTTCGACCGCGCGTTTCGCTAATGTTGCCTTCTCTGATGGTTCTCTTTTACATGGTTTTAATCAACGTATTCAAA
AGAGTCAGCCGATAGTCGCCCCCTACGATATCAAACGTTACTTTGTTACTCCTGAGGAGTCTGGTGAGTTATGTTTGATG
TCTTGTATTTTTGGTGAAAATCGCGACATATTCTTTCCTAAACTCAATGAAACTTTGCACCTTATTTCTTTCGCTGATAT
AGCGGTTAAATACCTTAATAAACTAGGTTTTGAACCTTATTTATGTGAAACGGAAGATGAAGCGCGTGAGTTGGTGAAAA
CATTACCCAAACAAGGTAAATGGCCATGCTTATTCACTTCTAGCGATACTACGGGTGAAAAAGACTTCGAAGAGTTCTTT
ACTGATAAAGAAACGCTAGATATGGAGCGCTTCGACGGTTTTGGCATAATCAAGAATGACCCGCTTTATCAACAAGAGTT
ACTAGAGACATTTGAGAAAAAGATAGATCAAATGAAGCTAGAGCGTCAGTGGAGTAAAGAAGATATCGTTAAATTATTCT
TCACCATGCTGCCTGAATTTGCTCATAAAGAAACTGGTAAATATCTAGATAGTAAGATGTAA

Upstream 100 bases:

>100_bases
GGTGGCTGTTTATCTGTTTGTTTTTTTAAAGCCTTTTTACTTTCGCTGCTACGTGATGAGTTTAAGGTTTAAGTTTTAAA
AGTTAAGGTTGAAAAATTTA

Downstream 100 bases:

>100_bases
GCGGAGTACGTGATGAAAGCGACACCAATTGTTGAGTTCGTTCGAGACATATACAAAACTGACGATTTTATTCCATTGCA
CGTACCGACGTTTAATGGCA

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MLSLIGRNNKLFAADIKCYEAELSHIVSTSSFLILGGAGSIGQAVTKEIFKRQPKKLHVVDISENNMVELVRDLRSSFGY
IDGEFNTYALDIGSIEYDAFIKADGHYDYVLNLSALKHVRSEKDPFTLMRMIDVNIFNTDKTVQQAIDSGAKKYFCVSTD
KAANPVNMMGASKRIMEMFLMRKSEHIAISTARFANVAFSDGSLLHGFNQRIQKSQPIVAPYDIKRYFVTPEESGELCLM
SCIFGENRDIFFPKLNETLHLISFADIAVKYLNKLGFEPYLCETEDEARELVKTLPKQGKWPCLFTSSDTTGEKDFEEFF
TDKETLDMERFDGFGIIKNDPLYQQELLETFEKKIDQMKLERQWSKEDIVKLFFTMLPEFAHKETGKYLDSKM

Sequences:

>Translated_393_residues
MLSLIGRNNKLFAADIKCYEAELSHIVSTSSFLILGGAGSIGQAVTKEIFKRQPKKLHVVDISENNMVELVRDLRSSFGY
IDGEFNTYALDIGSIEYDAFIKADGHYDYVLNLSALKHVRSEKDPFTLMRMIDVNIFNTDKTVQQAIDSGAKKYFCVSTD
KAANPVNMMGASKRIMEMFLMRKSEHIAISTARFANVAFSDGSLLHGFNQRIQKSQPIVAPYDIKRYFVTPEESGELCLM
SCIFGENRDIFFPKLNETLHLISFADIAVKYLNKLGFEPYLCETEDEARELVKTLPKQGKWPCLFTSSDTTGEKDFEEFF
TDKETLDMERFDGFGIIKNDPLYQQELLETFEKKIDQMKLERQWSKEDIVKLFFTMLPEFAHKETGKYLDSKM
>Mature_393_residues
MLSLIGRNNKLFAADIKCYEAELSHIVSTSSFLILGGAGSIGQAVTKEIFKRQPKKLHVVDISENNMVELVRDLRSSFGY
IDGEFNTYALDIGSIEYDAFIKADGHYDYVLNLSALKHVRSEKDPFTLMRMIDVNIFNTDKTVQQAIDSGAKKYFCVSTD
KAANPVNMMGASKRIMEMFLMRKSEHIAISTARFANVAFSDGSLLHGFNQRIQKSQPIVAPYDIKRYFVTPEESGELCLM
SCIFGENRDIFFPKLNETLHLISFADIAVKYLNKLGFEPYLCETEDEARELVKTLPKQGKWPCLFTSSDTTGEKDFEEFF
TDKETLDMERFDGFGIIKNDPLYQQELLETFEKKIDQMKLERQWSKEDIVKLFFTMLPEFAHKETGKYLDSKM

Specific function: Unknown

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 45034; Mature: 45034

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLIGRNNKLFAADIKCYEAELSHIVSTSSFLILGGAGSIGQAVTKEIFKRQPKKLHVV
CCEEECCCCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEE
DISENNMVELVRDLRSSFGYIDGEFNTYALDIGSIEYDAFIKADGHYDYVLNLSALKHVR
ECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEEECCCEEEEEEHHHHHHHH
SEKDPFTLMRMIDVNIFNTDKTVQQAIDSGAKKYFCVSTDKAANPVNMMGASKRIMEMFL
CCCCHHHEEHHHCCEEECCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
MRKSEHIAISTARFANVAFSDGSLLHGFNQRIQKSQPIVAPYDIKRYFVTPEESGELCLM
HCCCCCEEEEEHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEE
SCIFGENRDIFFPKLNETLHLISFADIAVKYLNKLGFEPYLCETEDEARELVKTLPKQGK
EEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCC
WPCLFTSSDTTGEKDFEEFFTDKETLDMERFDGFGIIKNDPLYQQELLETFEKKIDQMKL
CCEEEECCCCCCCHHHHHHHCCHHHCCHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
ERQWSKEDIVKLFFTMLPEFAHKETGKYLDSKM
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSLIGRNNKLFAADIKCYEAELSHIVSTSSFLILGGAGSIGQAVTKEIFKRQPKKLHVV
CCEEECCCCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEE
DISENNMVELVRDLRSSFGYIDGEFNTYALDIGSIEYDAFIKADGHYDYVLNLSALKHVR
ECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEEECCCEEEEEEHHHHHHHH
SEKDPFTLMRMIDVNIFNTDKTVQQAIDSGAKKYFCVSTDKAANPVNMMGASKRIMEMFL
CCCCHHHEEHHHCCEEECCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
MRKSEHIAISTARFANVAFSDGSLLHGFNQRIQKSQPIVAPYDIKRYFVTPEESGELCLM
HCCCCCEEEEEHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEE
SCIFGENRDIFFPKLNETLHLISFADIAVKYLNKLGFEPYLCETEDEARELVKTLPKQGK
EEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCC
WPCLFTSSDTTGEKDFEEFFTDKETLDMERFDGFGIIKNDPLYQQELLETFEKKIDQMKL
CCEEEECCCCCCCHHHHHHHCCHHHCCHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
ERQWSKEDIVKLFFTMLPEFAHKETGKYLDSKM
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]